Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 MIR634-201ENST00000385208 97 ntBASIC2.88□□□□□ -1.95
NUCKS1Q9H1E3 MIR548G-201ENST00000408442 89 ntBASIC2.88□□□□□ -1.95
NUCKS1Q9H1E3 RNU6-613P-201ENST00000410412 108 ntBASIC2.88□□□□□ -1.95
NUCKS1Q9H1E3 RPL31P63-201ENST00000422565 375 ntBASIC2.88□□□□□ -1.95
NUCKS1Q9H1E3 AC093850.1-201ENST00000454121 251 ntBASIC2.88□□□□□ -1.95
NUCKS1Q9H1E3 RNU7-35P-201ENST00000517174 62 ntBASIC2.88□□□□□ -1.95
NUCKS1Q9H1E3 MIR4635-201ENST00000583759 79 ntBASIC2.88□□□□□ -1.95
NUCKS1Q9H1E3 MIR3616-201ENST00000584070 92 ntBASIC2.88□□□□□ -1.95
NUCKS1Q9H1E3 U4atac.1-201ENST00000618345 95 ntBASIC2.88□□□□□ -1.95
NUCKS1Q9H1E3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NUCKS1Q9H1E3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
NUCKS1Q9H1E3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NUCKS1Q9H1E3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.87□□□□□ -1.95
NUCKS1Q9H1E3 RNU1-112P-201ENST00000364401 164 ntBASIC2.87□□□□□ -1.95
NUCKS1Q9H1E3 Y_RNA.565-201ENST00000384719 101 ntBASIC2.87□□□□□ -1.95
NUCKS1Q9H1E3 MIR144-201ENST00000384886 86 ntBASIC2.87□□□□□ -1.95
NUCKS1Q9H1E3 RNA5SP356-201ENST00000515972 94 ntBASIC2.87□□□□□ -1.95
NUCKS1Q9H1E3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.87□□□□□ -1.95
NUCKS1Q9H1E3 MIR5094-201ENST00000578766 85 ntBASIC2.87□□□□□ -1.95
NUCKS1Q9H1E3 MIR6895-201ENST00000613497 78 ntBASIC2.87□□□□□ -1.95
NUCKS1Q9H1E3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.86□□□□□ -1.95
NUCKS1Q9H1E3 DEFA7P-201ENST00000382676 285 ntBASIC2.86□□□□□ -1.95
NUCKS1Q9H1E3 Y_RNA.448-201ENST00000384185 108 ntBASIC2.86□□□□□ -1.95
NUCKS1Q9H1E3 MIR519C-201ENST00000385053 87 ntBASIC2.86□□□□□ -1.95
NUCKS1Q9H1E3 MIR9-1-201ENST00000385198 89 ntBASIC2.86□□□□□ -1.95
NUCKS1Q9H1E3 AC245047.7-201ENST00000440265 293 ntBASIC2.86□□□□□ -1.95
NUCKS1Q9H1E3 RNU1-98P-201ENST00000458992 160 ntBASIC2.86□□□□□ -1.95
NUCKS1Q9H1E3 SNORD123-201ENST00000459473 70 ntBASIC2.86□□□□□ -1.95
NUCKS1Q9H1E3 AC093729.1-201ENST00000513074 128 ntBASIC2.86□□□□□ -1.95
NUCKS1Q9H1E3 RNU1-58P-201ENST00000362413 163 ntBASIC2.85□□□□□ -1.95
NUCKS1Q9H1E3 RNU6-1031P-201ENST00000384773 107 ntBASIC2.85□□□□□ -1.95
NUCKS1Q9H1E3 AC011753.1-201ENST00000451001 220 ntBASIC2.85□□□□□ -1.95
NUCKS1Q9H1E3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.85□□□□□ -1.95
NUCKS1Q9H1E3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.85□□□□□ -1.95
NUCKS1Q9H1E3 SNORD67.1-201ENST00000516618 108 ntBASIC2.85□□□□□ -1.95
NUCKS1Q9H1E3 AL513043.2-201ENST00000573941 143 ntBASIC2.85□□□□□ -1.95
NUCKS1Q9H1E3 MIR4319-201ENST00000577285 85 ntBASIC2.85□□□□□ -1.95
NUCKS1Q9H1E3 AC026271.5-201ENST00000577873 130 ntBASIC2.85□□□□□ -1.95
NUCKS1Q9H1E3 AC020891.4-201ENST00000605745 93 ntBASIC2.85□□□□□ -1.95
NUCKS1Q9H1E3 RNU6-90P-201ENST00000606352 106 ntBASIC2.85□□□□□ -1.95
NUCKS1Q9H1E3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.84□□□□□ -1.95
NUCKS1Q9H1E3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
NUCKS1Q9H1E3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NUCKS1Q9H1E3 RNU6-865P-201ENST00000364772 107 ntBASIC2.84□□□□□ -1.95
NUCKS1Q9H1E3 Y_RNA.510-201ENST00000384511 114 ntBASIC2.84□□□□□ -1.95
NUCKS1Q9H1E3 RNU6-950P-201ENST00000384651 107 ntBASIC2.84□□□□□ -1.95
NUCKS1Q9H1E3 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.84□□□□□ -1.95
NUCKS1Q9H1E3 AC145423.2-201ENST00000610631 239 ntBASIC2.84□□□□□ -1.95
NUCKS1Q9H1E3 SCARNA15.3-201ENST00000626315 122 ntBASIC2.84□□□□□ -1.95
NUCKS1Q9H1E3 SCARNA4.1-201ENST00000628597 123 ntBASIC2.84□□□□□ -1.95
NUCKS1Q9H1E3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
NUCKS1Q9H1E3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
NUCKS1Q9H1E3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
NUCKS1Q9H1E3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.83□□□□□ -1.96
NUCKS1Q9H1E3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.83□□□□□ -1.96
NUCKS1Q9H1E3 MIR6073-201ENST00000352083 89 ntBASIC2.83□□□□□ -1.96
NUCKS1Q9H1E3 MIR526A1-201ENST00000384897 85 ntBASIC2.83□□□□□ -1.96
NUCKS1Q9H1E3 SPINT5P-201ENST00000448174 155 ntBASIC2.83□□□□□ -1.96
NUCKS1Q9H1E3 AC108938.1-201ENST00000451204 136 ntBASIC2.83□□□□□ -1.96
NUCKS1Q9H1E3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.83□□□□□ -1.96
NUCKS1Q9H1E3 AC140658.3-201ENST00000567603 271 ntBASIC2.83□□□□□ -1.96
NUCKS1Q9H1E3 MIR8055-201ENST00000610739 97 ntBASIC2.83□□□□□ -1.96
NUCKS1Q9H1E3 AC022202.1-201ENST00000613515 211 ntBASIC2.83□□□□□ -1.96
NUCKS1Q9H1E3 MIR8065-201ENST00000620577 100 ntBASIC2.83□□□□□ -1.96
NUCKS1Q9H1E3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.83□□□□□ -1.96
NUCKS1Q9H1E3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
NUCKS1Q9H1E3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.83□□□□□ -1.96
NUCKS1Q9H1E3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
NUCKS1Q9H1E3 Y_RNA.173-201ENST00000363776 113 ntBASIC2.82□□□□□ -1.96
NUCKS1Q9H1E3 Y_RNA.537-201ENST00000384626 109 ntBASIC2.82□□□□□ -1.96
NUCKS1Q9H1E3 RNU6-1321P-201ENST00000390905 107 ntBASIC2.82□□□□□ -1.96
NUCKS1Q9H1E3 RNA5SP210-201ENST00000391034 120 ntBASIC2.82□□□□□ -1.96
NUCKS1Q9H1E3 BX510359.4-201ENST00000423750 193 ntBASIC2.82□□□□□ -1.96
NUCKS1Q9H1E3 SNORD109B-201ENST00000458961 67 ntBASIC2.82□□□□□ -1.96
NUCKS1Q9H1E3 SNORD109A-201ENST00000459128 67 ntBASIC2.82□□□□□ -1.96
NUCKS1Q9H1E3 RNA5SP402-201ENST00000517148 110 ntBASIC2.82□□□□□ -1.96
NUCKS1Q9H1E3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.82□□□□□ -1.96
NUCKS1Q9H1E3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
NUCKS1Q9H1E3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NUCKS1Q9H1E3 AC062016.1-201ENST00000355719 319 ntBASIC2.81□□□□□ -1.96
NUCKS1Q9H1E3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
NUCKS1Q9H1E3 RNU6-1086P-201ENST00000410930 100 ntBASIC2.81□□□□□ -1.96
NUCKS1Q9H1E3 snoU13.16-201ENST00000459350 104 ntBASIC2.81□□□□□ -1.96
NUCKS1Q9H1E3 RNA5SP282-201ENST00000516355 108 ntBASIC2.81□□□□□ -1.96
NUCKS1Q9H1E3 AC121758.2-201ENST00000553271 193 ntBASIC2.81□□□□□ -1.96
NUCKS1Q9H1E3 AC105081.1-201ENST00000617727 106 ntBASIC2.81□□□□□ -1.96
NUCKS1Q9H1E3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NUCKS1Q9H1E3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
NUCKS1Q9H1E3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
NUCKS1Q9H1E3 SNORD115-37-201ENST00000363768 82 ntBASIC2.8□□□□□ -1.96
NUCKS1Q9H1E3 MIR181B2-201ENST00000385004 89 ntBASIC2.8□□□□□ -1.96
NUCKS1Q9H1E3 MIR29C-201ENST00000385231 88 ntBASIC2.8□□□□□ -1.96
NUCKS1Q9H1E3 RNU7-79P-201ENST00000516082 62 ntBASIC2.8□□□□□ -1.96
NUCKS1Q9H1E3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.8□□□□□ -1.96
NUCKS1Q9H1E3 RNU7-137P-201ENST00000516788 62 ntBASIC2.8□□□□□ -1.96
NUCKS1Q9H1E3 AC012676.2-201ENST00000619258 186 ntBASIC2.8□□□□□ -1.96
NUCKS1Q9H1E3 MIR6852-201ENST00000621699 66 ntBASIC2.8□□□□□ -1.96
NUCKS1Q9H1E3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
NUCKS1Q9H1E3 AP000648.3-201ENST00000623539 4507 ntBASIC2.8□□□□□ -1.96
NUCKS1Q9H1E3 RNA5SP181-201ENST00000410246 98 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms