Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 RNU6-241P-201ENST00000391148 104 ntBASIC1.26□□□□□ -2.21
NPIPB3Q92617 RNU4-61P-201ENST00000411243 107 ntBASIC1.26□□□□□ -2.21
NPIPB3Q92617 RNU6-177P-201ENST00000411257 104 ntBASIC1.26□□□□□ -2.21
NPIPB3Q92617 AC023790.1-201ENST00000482174 347 ntBASIC1.26□□□□□ -2.21
NPIPB3Q92617 SNORD79.1-201ENST00000516069 84 ntBASIC1.26□□□□□ -2.21
NPIPB3Q92617 Y_RNA.686-201ENST00000516548 134 ntBASIC1.26□□□□□ -2.21
NPIPB3Q92617 RNU6-113P-201ENST00000516653 101 ntBASIC1.26□□□□□ -2.21
NPIPB3Q92617 AP001328.1-201ENST00000528550 176 ntBASIC1.26□□□□□ -2.21
NPIPB3Q92617 MIR502-201ENST00000606349 86 ntBASIC1.26□□□□□ -2.21
NPIPB3Q92617 AC021613.1-201ENST00000623880 111 ntBASIC1.26□□□□□ -2.21
NPIPB3Q92617 AP001340.1-201ENST00000624405 217 ntBASIC1.26□□□□□ -2.21
NPIPB3Q92617 RNA5SP126-201ENST00000365092 109 ntBASIC1.25□□□□□ -2.21
NPIPB3Q92617 SNORA70B-201ENST00000384210 135 ntBASIC1.25□□□□□ -2.21
NPIPB3Q92617 SNORD38B-201ENST00000384690 67 ntBASIC1.25□□□□□ -2.21
NPIPB3Q92617 MT-TN-201ENST00000387400 73 ntBASIC1.25□□□□□ -2.21
NPIPB3Q92617 SNORA75.2-201ENST00000391138 150 ntBASIC1.25□□□□□ -2.21
NPIPB3Q92617 SNORA75.3-201ENST00000391231 150 ntBASIC1.25□□□□□ -2.21
NPIPB3Q92617 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.25□□□□□ -2.21
NPIPB3Q92617 RPS3AP1-201ENST00000413190 320 ntBASIC1.25□□□□□ -2.21
NPIPB3Q92617 HMGN1P33-201ENST00000432945 451 ntBASIC1.25□□□□□ -2.21
NPIPB3Q92617 TMSB4XP3-201ENST00000445144 114 ntBASIC1.25□□□□□ -2.21
NPIPB3Q92617 AP000753.3-201ENST00000604083 169 ntBASIC1.25□□□□□ -2.21
NPIPB3Q92617 MIR6717-201ENST00000622747 73 ntBASIC1.25□□□□□ -2.21
NPIPB3Q92617 AC091895.1-201ENST00000624494 256 ntBASIC1.25□□□□□ -2.21
NPIPB3Q92617 SNORD38B-202ENST00000625943 69 ntBASIC1.25□□□□□ -2.21
NPIPB3Q92617 Y_RNA.354-201ENST00000365448 111 ntBASIC1.24□□□□□ -2.21
NPIPB3Q92617 SNORA40-201ENST00000388090 126 ntBASIC1.24□□□□□ -2.21
NPIPB3Q92617 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
NPIPB3Q92617 SNORA26.6-201ENST00000391256 115 ntBASIC1.24□□□□□ -2.21
NPIPB3Q92617 RNU6-257P-201ENST00000410238 98 ntBASIC1.24□□□□□ -2.21
NPIPB3Q92617 RNU6-613P-201ENST00000410412 108 ntBASIC1.24□□□□□ -2.21
NPIPB3Q92617 RNU6-1190P-201ENST00000410811 104 ntBASIC1.24□□□□□ -2.21
NPIPB3Q92617 MRPL35P3-201ENST00000421557 364 ntBASIC1.24□□□□□ -2.21
NPIPB3Q92617 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.24□□□□□ -2.21
NPIPB3Q92617 RNU6-893P-201ENST00000458841 100 ntBASIC1.24□□□□□ -2.21
NPIPB3Q92617 RNU7-21P-201ENST00000459430 62 ntBASIC1.24□□□□□ -2.21
NPIPB3Q92617 RNU7-45P-201ENST00000459460 63 ntBASIC1.24□□□□□ -2.21
NPIPB3Q92617 RPL23AP94-201ENST00000512518 302 ntBASIC1.24□□□□□ -2.21
NPIPB3Q92617 Y_RNA.692-201ENST00000516627 105 ntBASIC1.24□□□□□ -2.21
NPIPB3Q92617 MIR4264-201ENST00000583520 66 ntBASIC1.24□□□□□ -2.21
NPIPB3Q92617 MIR6516-201ENST00000630554 81 ntBASIC1.24□□□□□ -2.21
NPIPB3Q92617 RNU6-349P-201ENST00000362402 107 ntBASIC1.23□□□□□ -2.21
NPIPB3Q92617 Y_RNA.330-201ENST00000365230 109 ntBASIC1.23□□□□□ -2.21
NPIPB3Q92617 RNU6-690P-201ENST00000365242 106 ntBASIC1.23□□□□□ -2.21
NPIPB3Q92617 Y_RNA.430-201ENST00000384081 110 ntBASIC1.23□□□□□ -2.21
NPIPB3Q92617 Y_RNA.586-201ENST00000391146 98 ntBASIC1.23□□□□□ -2.21
NPIPB3Q92617 MTND4LP9-201ENST00000427694 174 ntBASIC1.23□□□□□ -2.21
NPIPB3Q92617 RNU7-90P-201ENST00000459216 62 ntBASIC1.23□□□□□ -2.21
NPIPB3Q92617 AC019288.1-201ENST00000557918 224 ntBASIC1.23□□□□□ -2.21
NPIPB3Q92617 U7.2-201ENST00000607576 63 ntBASIC1.23□□□□□ -2.21
NPIPB3Q92617 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.23□□□□□ -2.21
NPIPB3Q92617 MIR377-201ENST00000362145 69 ntBASIC1.22□□□□□ -2.21
NPIPB3Q92617 MIR26B-201ENST00000362251 77 ntBASIC1.22□□□□□ -2.21
NPIPB3Q92617 RNU4-16P-201ENST00000364737 141 ntBASIC1.22□□□□□ -2.21
NPIPB3Q92617 SNORA25.8-201ENST00000364831 128 ntBASIC1.22□□□□□ -2.21
NPIPB3Q92617 RNU6-602P-201ENST00000411155 105 ntBASIC1.22□□□□□ -2.21
NPIPB3Q92617 AC090844.1-201ENST00000422019 156 ntBASIC1.22□□□□□ -2.21
NPIPB3Q92617 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.22□□□□□ -2.21
NPIPB3Q92617 Y_RNA.757-201ENST00000578934 114 ntBASIC1.22□□□□□ -2.21
NPIPB3Q92617 MIR3910-1-201ENST00000580936 111 ntBASIC1.22□□□□□ -2.21
NPIPB3Q92617 TUG1_4.1-201ENST00000619464 181 ntBASIC1.22□□□□□ -2.21
NPIPB3Q92617 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.21□□□□□ -2.21
NPIPB3Q92617 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
NPIPB3Q92617 RNU6-309P-201ENST00000364573 106 ntBASIC1.21□□□□□ -2.22
NPIPB3Q92617 MIR504-201ENST00000385065 83 ntBASIC1.21□□□□□ -2.22
NPIPB3Q92617 U8.13-201ENST00000390842 128 ntBASIC1.21□□□□□ -2.22
NPIPB3Q92617 MIR1304-201ENST00000408243 91 ntBASIC1.21□□□□□ -2.22
NPIPB3Q92617 AC063976.4-201ENST00000421971 163 ntBASIC1.21□□□□□ -2.22
NPIPB3Q92617 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.21□□□□□ -2.22
NPIPB3Q92617 Y_RNA.651-201ENST00000459380 103 ntBASIC1.21□□□□□ -2.22
NPIPB3Q92617 SNORA25.15-201ENST00000516487 89 ntBASIC1.21□□□□□ -2.22
NPIPB3Q92617 MIR6845-201ENST00000613182 61 ntBASIC1.21□□□□□ -2.22
NPIPB3Q92617 AC027335.2-201ENST00000624030 375 ntBASIC1.21□□□□□ -2.22
NPIPB3Q92617 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
NPIPB3Q92617 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.2□□□□□ -2.22
NPIPB3Q92617 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
NPIPB3Q92617 SNORA22.1-201ENST00000362701 134 ntBASIC1.2□□□□□ -2.22
NPIPB3Q92617 RNU6-654P-201ENST00000364373 107 ntBASIC1.2□□□□□ -2.22
NPIPB3Q92617 MIR320A-201ENST00000385302 82 ntBASIC1.2□□□□□ -2.22
NPIPB3Q92617 RNU5E-3P-201ENST00000515913 68 ntBASIC1.2□□□□□ -2.22
NPIPB3Q92617 AC133485.4-201ENST00000561835 220 ntBASIC1.2□□□□□ -2.22
NPIPB3Q92617 AC138907.4-201ENST00000570107 226 ntBASIC1.2□□□□□ -2.22
NPIPB3Q92617 HSPE1P19-201ENST00000603327 295 ntBASIC1.2□□□□□ -2.22
NPIPB3Q92617 BX248123.2-201ENST00000606318 124 ntBASIC1.2□□□□□ -2.22
NPIPB3Q92617 MIR6841-201ENST00000637129 72 ntBASIC1.2□□□□□ -2.22
NPIPB3Q92617 AC008163.1-202ENST00000636004 2889 ntBASIC1.2□□□□□ -2.22
NPIPB3Q92617 RNU6-508P-201ENST00000363231 103 ntBASIC1.19□□□□□ -2.22
NPIPB3Q92617 Y_RNA.168-201ENST00000363740 102 ntBASIC1.19□□□□□ -2.22
NPIPB3Q92617 RNU6-955P-201ENST00000410497 104 ntBASIC1.19□□□□□ -2.22
NPIPB3Q92617 RNU6-240P-201ENST00000516098 97 ntBASIC1.19□□□□□ -2.22
NPIPB3Q92617 RNU6-789P-201ENST00000517105 102 ntBASIC1.19□□□□□ -2.22
NPIPB3Q92617 MIR3683-201ENST00000580847 82 ntBASIC1.19□□□□□ -2.22
NPIPB3Q92617 AC132825.6-201ENST00000638861 357 ntBASIC1.19□□□□□ -2.22
NPIPB3Q92617 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
NPIPB3Q92617 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.18□□□□□ -2.22
NPIPB3Q92617 RNU1-42P-201ENST00000364033 160 ntBASIC1.18□□□□□ -2.22
NPIPB3Q92617 MIR539-201ENST00000365690 78 ntBASIC1.18□□□□□ -2.22
NPIPB3Q92617 AL022718.1-201ENST00000412004 84 ntBASIC1.18□□□□□ -2.22
NPIPB3Q92617 RNU7-40P-201ENST00000516397 64 ntBASIC1.18□□□□□ -2.22
NPIPB3Q92617 RNU6-295P-201ENST00000516901 104 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms