Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 SUMO2P16-201ENST00000519475 264 ntBASIC2.04□□□□□ -2.08
SYNE4Q8N205 MIR3935-201ENST00000583472 104 ntBASIC2.04□□□□□ -2.08
SYNE4Q8N205 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.04□□□□□ -2.08
SYNE4Q8N205 MIR6779-201ENST00000617283 64 ntBASIC2.04□□□□□ -2.08
SYNE4Q8N205 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.04□□□□□ -2.08
SYNE4Q8N205 AL442644.1-201ENST00000454390 3105 ntBASIC2.03□□□□□ -2.08
SYNE4Q8N205 RNA5SP276-201ENST00000362580 94 ntBASIC2.03□□□□□ -2.08
SYNE4Q8N205 SNORA63.5-201ENST00000363548 123 ntBASIC2.03□□□□□ -2.08
SYNE4Q8N205 SNORD114-22-201ENST00000365423 72 ntBASIC2.03□□□□□ -2.08
SYNE4Q8N205 RNY1P6-201ENST00000384193 109 ntBASIC2.03□□□□□ -2.08
SYNE4Q8N205 RNA5SP100-201ENST00000410903 110 ntBASIC2.03□□□□□ -2.08
SYNE4Q8N205 RNA5SP59-201ENST00000410922 110 ntBASIC2.03□□□□□ -2.08
SYNE4Q8N205 SNX2P2-201ENST00000424553 323 ntBASIC2.03□□□□□ -2.08
SYNE4Q8N205 RPS27P21-201ENST00000486977 252 ntBASIC2.03□□□□□ -2.08
SYNE4Q8N205 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.03□□□□□ -2.08
SYNE4Q8N205 RNU7-181P-201ENST00000517234 74 ntBASIC2.03□□□□□ -2.08
SYNE4Q8N205 SNORD53B-201ENST00000577887 78 ntBASIC2.03□□□□□ -2.08
SYNE4Q8N205 AC021443.1-201ENST00000604478 211 ntBASIC2.03□□□□□ -2.08
SYNE4Q8N205 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.03□□□□□ -2.08
SYNE4Q8N205 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.03□□□□□ -2.08
SYNE4Q8N205 AL596211.1-201ENST00000569873 2277 ntBASIC2.03□□□□□ -2.08
SYNE4Q8N205 MIR342-201ENST00000362212 99 ntBASIC2.02□□□□□ -2.09
SYNE4Q8N205 Y_RNA.298-201ENST00000364960 107 ntBASIC2.02□□□□□ -2.09
SYNE4Q8N205 Y_RNA.362-201ENST00000365518 110 ntBASIC2.02□□□□□ -2.09
SYNE4Q8N205 RNU4-52P-201ENST00000384209 138 ntBASIC2.02□□□□□ -2.09
SYNE4Q8N205 RNU6-424P-201ENST00000384367 105 ntBASIC2.02□□□□□ -2.09
SYNE4Q8N205 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SYNE4Q8N205 SNORA19.1-201ENST00000410656 129 ntBASIC2.02□□□□□ -2.09
SYNE4Q8N205 AC093850.1-201ENST00000454121 251 ntBASIC2.02□□□□□ -2.09
SYNE4Q8N205 RNA5SP168-201ENST00000516642 112 ntBASIC2.02□□□□□ -2.09
SYNE4Q8N205 SNORA18.7-201ENST00000516910 131 ntBASIC2.02□□□□□ -2.09
SYNE4Q8N205 MIR5582-201ENST00000579697 68 ntBASIC2.02□□□□□ -2.09
SYNE4Q8N205 U1.36-201ENST00000620684 176 ntBASIC2.02□□□□□ -2.09
SYNE4Q8N205 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SYNE4Q8N205 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SYNE4Q8N205 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SYNE4Q8N205 RNU6-640P-201ENST00000363693 105 ntBASIC2.01□□□□□ -2.09
SYNE4Q8N205 Y_RNA.198-201ENST00000364013 98 ntBASIC2.01□□□□□ -2.09
SYNE4Q8N205 Y_RNA.328-201ENST00000365208 113 ntBASIC2.01□□□□□ -2.09
SYNE4Q8N205 Y_RNA.344-201ENST00000365381 112 ntBASIC2.01□□□□□ -2.09
SYNE4Q8N205 Y_RNA.351-201ENST00000365436 96 ntBASIC2.01□□□□□ -2.09
SYNE4Q8N205 RNU6-905P-201ENST00000384434 107 ntBASIC2.01□□□□□ -2.09
SYNE4Q8N205 MIR516B2-201ENST00000385190 85 ntBASIC2.01□□□□□ -2.09
SYNE4Q8N205 HMGN2P32-201ENST00000444648 269 ntBASIC2.01□□□□□ -2.09
SYNE4Q8N205 RNU1-123P-201ENST00000458950 160 ntBASIC2.01□□□□□ -2.09
SYNE4Q8N205 RNU7-45P-201ENST00000459460 63 ntBASIC2.01□□□□□ -2.09
SYNE4Q8N205 RNU7-28P-201ENST00000516759 62 ntBASIC2.01□□□□□ -2.09
SYNE4Q8N205 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.01□□□□□ -2.09
SYNE4Q8N205 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.01□□□□□ -2.09
SYNE4Q8N205 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
SYNE4Q8N205 Y_RNA.163-201ENST00000363702 113 ntBASIC2□□□□□ -2.09
SYNE4Q8N205 Y_RNA.242-201ENST00000364473 110 ntBASIC2□□□□□ -2.09
SYNE4Q8N205 RNU1-133P-201ENST00000364867 167 ntBASIC2□□□□□ -2.09
SYNE4Q8N205 Y_RNA.309-201ENST00000365046 111 ntBASIC2□□□□□ -2.09
SYNE4Q8N205 Y_RNA.348-201ENST00000365403 103 ntBASIC2□□□□□ -2.09
SYNE4Q8N205 RNU6-32P-201ENST00000383948 107 ntBASIC2□□□□□ -2.09
SYNE4Q8N205 RNU6-13P-201ENST00000384248 107 ntBASIC2□□□□□ -2.09
SYNE4Q8N205 RNU6-12P-201ENST00000384604 107 ntBASIC2□□□□□ -2.09
SYNE4Q8N205 RNU6-41P-201ENST00000384741 107 ntBASIC2□□□□□ -2.09
SYNE4Q8N205 AC015922.2-201ENST00000435593 184 ntBASIC2□□□□□ -2.09
SYNE4Q8N205 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2□□□□□ -2.09
SYNE4Q8N205 AC069257.2-201ENST00000441819 155 ntBASIC2□□□□□ -2.09
SYNE4Q8N205 RNU7-164P-201ENST00000459221 62 ntBASIC2□□□□□ -2.09
SYNE4Q8N205 RPL39P34-201ENST00000477141 156 ntBASIC2□□□□□ -2.09
SYNE4Q8N205 RNU6-537P-201ENST00000517277 103 ntBASIC2□□□□□ -2.09
SYNE4Q8N205 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2□□□□□ -2.09
SYNE4Q8N205 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2□□□□□ -2.09
SYNE4Q8N205 RNU6-414P-201ENST00000363705 104 ntBASIC1.99□□□□□ -2.09
SYNE4Q8N205 SNORA7.1-201ENST00000363750 139 ntBASIC1.99□□□□□ -2.09
SYNE4Q8N205 RNU6-1014P-201ENST00000383940 103 ntBASIC1.99□□□□□ -2.09
SYNE4Q8N205 MIR520A-201ENST00000384862 85 ntBASIC1.99□□□□□ -2.09
SYNE4Q8N205 U8.17-201ENST00000391292 132 ntBASIC1.99□□□□□ -2.09
SYNE4Q8N205 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.99□□□□□ -2.09
SYNE4Q8N205 AC099513.1-201ENST00000490423 301 ntBASIC1.99□□□□□ -2.09
SYNE4Q8N205 AC090821.2-201ENST00000523552 176 ntBASIC1.99□□□□□ -2.09
SYNE4Q8N205 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.99□□□□□ -2.09
SYNE4Q8N205 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.99□□□□□ -2.09
SYNE4Q8N205 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
SYNE4Q8N205 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SYNE4Q8N205 SNORD114-26-201ENST00000363543 72 ntBASIC1.98□□□□□ -2.09
SYNE4Q8N205 Y_RNA.241-201ENST00000364470 117 ntBASIC1.98□□□□□ -2.09
SYNE4Q8N205 RNU6-756P-201ENST00000383997 107 ntBASIC1.98□□□□□ -2.09
SYNE4Q8N205 RNU6-1031P-201ENST00000384773 107 ntBASIC1.98□□□□□ -2.09
SYNE4Q8N205 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SYNE4Q8N205 AC087499.4-201ENST00000448505 178 ntBASIC1.98□□□□□ -2.09
SYNE4Q8N205 Y_RNA.677-201ENST00000516401 85 ntBASIC1.98□□□□□ -2.09
SYNE4Q8N205 SNORA31.17-201ENST00000516953 127 ntBASIC1.98□□□□□ -2.09
SYNE4Q8N205 MIR3618-201ENST00000580330 88 ntBASIC1.98□□□□□ -2.09
SYNE4Q8N205 MIR4305-201ENST00000583252 102 ntBASIC1.98□□□□□ -2.09
SYNE4Q8N205 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
SYNE4Q8N205 AL359851.1-201ENST00000569460 4997 ntBASIC1.98□□□□□ -2.09
SYNE4Q8N205 U8.6-201ENST00000364939 135 ntBASIC1.97□□□□□ -2.09
SYNE4Q8N205 SNORA27-201ENST00000384323 126 ntBASIC1.97□□□□□ -2.09
SYNE4Q8N205 SNORD38C-201ENST00000384381 69 ntBASIC1.97□□□□□ -2.09
SYNE4Q8N205 MIR526A1-201ENST00000384897 85 ntBASIC1.97□□□□□ -2.09
SYNE4Q8N205 AL356379.1-201ENST00000414105 126 ntBASIC1.97□□□□□ -2.09
SYNE4Q8N205 RNU6-109P-201ENST00000516364 107 ntBASIC1.97□□□□□ -2.09
SYNE4Q8N205 RNU6-184P-201ENST00000516514 107 ntBASIC1.97□□□□□ -2.09
SYNE4Q8N205 RNU7-70P-201ENST00000516941 66 ntBASIC1.97□□□□□ -2.09
SYNE4Q8N205 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms