Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SNORA25.12-201ENST00000516202 82 ntBASIC1.17□□□□□ -2.22
SHFQ7M4L6 RNU7-70P-201ENST00000516941 66 ntBASIC1.17□□□□□ -2.22
SHFQ7M4L6 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.17□□□□□ -2.22
SHFQ7M4L6 MIR548X2-201ENST00000579776 100 ntBASIC1.17□□□□□ -2.22
SHFQ7M4L6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.17□□□□□ -2.22
SHFQ7M4L6 MIR302B-201ENST00000362188 73 ntBASIC1.16□□□□□ -2.22
SHFQ7M4L6 RNU6-508P-201ENST00000363231 103 ntBASIC1.16□□□□□ -2.22
SHFQ7M4L6 RNY1P5-201ENST00000383890 115 ntBASIC1.16□□□□□ -2.22
SHFQ7M4L6 MIR23A-201ENST00000385245 73 ntBASIC1.16□□□□□ -2.22
SHFQ7M4L6 RNU6-460P-201ENST00000391158 108 ntBASIC1.16□□□□□ -2.22
SHFQ7M4L6 SNORA26.6-201ENST00000391256 115 ntBASIC1.16□□□□□ -2.22
SHFQ7M4L6 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.16□□□□□ -2.22
SHFQ7M4L6 RNU6-346P-201ENST00000516288 111 ntBASIC1.16□□□□□ -2.22
SHFQ7M4L6 Y_RNA.686-201ENST00000516548 134 ntBASIC1.16□□□□□ -2.22
SHFQ7M4L6 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.16□□□□□ -2.22
SHFQ7M4L6 DNAJC19P9-201ENST00000555084 351 ntBASIC1.16□□□□□ -2.22
SHFQ7M4L6 AL022345.2-201ENST00000606307 135 ntBASIC1.16□□□□□ -2.22
SHFQ7M4L6 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.16□□□□□ -2.22
SHFQ7M4L6 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.16□□□□□ -2.22
SHFQ7M4L6 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
SHFQ7M4L6 SNORD79.1-201ENST00000516069 84 ntBASIC1.15□□□□□ -2.23
SHFQ7M4L6 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.15□□□□□ -2.23
SHFQ7M4L6 HSPE1P19-201ENST00000603327 295 ntBASIC1.15□□□□□ -2.23
SHFQ7M4L6 MIR6516-201ENST00000630554 81 ntBASIC1.15□□□□□ -2.23
SHFQ7M4L6 Z97988.1-201ENST00000637697 135 ntBASIC1.15□□□□□ -2.23
SHFQ7M4L6 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SHFQ7M4L6 Y_RNA.120-201ENST00000363304 110 ntBASIC1.14□□□□□ -2.23
SHFQ7M4L6 Y_RNA.488-201ENST00000384403 102 ntBASIC1.14□□□□□ -2.23
SHFQ7M4L6 RNU6-125P-201ENST00000384505 107 ntBASIC1.14□□□□□ -2.23
SHFQ7M4L6 AC004223.1-201ENST00000479840 271 ntBASIC1.14□□□□□ -2.23
SHFQ7M4L6 RNA5SP272-201ENST00000516095 111 ntBASIC1.14□□□□□ -2.23
SHFQ7M4L6 RN7SKP179-201ENST00000516126 217 ntBASIC1.14□□□□□ -2.23
SHFQ7M4L6 RNU11-2P-201ENST00000516898 142 ntBASIC1.14□□□□□ -2.23
SHFQ7M4L6 RNU1-92P-201ENST00000517017 135 ntBASIC1.14□□□□□ -2.23
SHFQ7M4L6 SNORA70.22-201ENST00000517160 124 ntBASIC1.14□□□□□ -2.23
SHFQ7M4L6 RNU6-654P-201ENST00000364373 107 ntBASIC1.13□□□□□ -2.23
SHFQ7M4L6 RNU6-309P-201ENST00000364573 106 ntBASIC1.13□□□□□ -2.23
SHFQ7M4L6 SNORA1.1-201ENST00000364671 133 ntBASIC1.13□□□□□ -2.23
SHFQ7M4L6 SNORA25-201ENST00000384384 134 ntBASIC1.13□□□□□ -2.23
SHFQ7M4L6 SNORA80D-201ENST00000384488 135 ntBASIC1.13□□□□□ -2.23
SHFQ7M4L6 SNORA20-201ENST00000384662 132 ntBASIC1.13□□□□□ -2.23
SHFQ7M4L6 MTATP6P21-201ENST00000440681 189 ntBASIC1.13□□□□□ -2.23
SHFQ7M4L6 Y_RNA.651-201ENST00000459380 103 ntBASIC1.13□□□□□ -2.23
SHFQ7M4L6 RNU7-21P-201ENST00000459430 62 ntBASIC1.13□□□□□ -2.23
SHFQ7M4L6 RNU6-426P-201ENST00000516464 97 ntBASIC1.13□□□□□ -2.23
SHFQ7M4L6 MIR4303-201ENST00000581299 66 ntBASIC1.13□□□□□ -2.23
SHFQ7M4L6 SEPT14P17-201ENST00000617978 177 ntBASIC1.13□□□□□ -2.23
SHFQ7M4L6 MIR6717-201ENST00000622747 73 ntBASIC1.13□□□□□ -2.23
SHFQ7M4L6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SHFQ7M4L6 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.12□□□□□ -2.23
SHFQ7M4L6 MIR26B-201ENST00000362251 77 ntBASIC1.12□□□□□ -2.23
SHFQ7M4L6 RNU6-349P-201ENST00000362402 107 ntBASIC1.12□□□□□ -2.23
SHFQ7M4L6 RNU6-774P-201ENST00000363238 107 ntBASIC1.12□□□□□ -2.23
SHFQ7M4L6 RNU4-16P-201ENST00000364737 141 ntBASIC1.12□□□□□ -2.23
SHFQ7M4L6 RNU6-915P-201ENST00000364943 103 ntBASIC1.12□□□□□ -2.23
SHFQ7M4L6 RNU6-396P-201ENST00000365369 105 ntBASIC1.12□□□□□ -2.23
SHFQ7M4L6 Y_RNA.420-201ENST00000384043 110 ntBASIC1.12□□□□□ -2.23
SHFQ7M4L6 RNY1P6-201ENST00000384193 109 ntBASIC1.12□□□□□ -2.23
SHFQ7M4L6 RNU6-1319P-201ENST00000390855 104 ntBASIC1.12□□□□□ -2.23
SHFQ7M4L6 RNU6-747P-201ENST00000390928 104 ntBASIC1.12□□□□□ -2.23
SHFQ7M4L6 RNU6-241P-201ENST00000391148 104 ntBASIC1.12□□□□□ -2.23
SHFQ7M4L6 AL603914.1-201ENST00000401964 204 ntBASIC1.12□□□□□ -2.23
SHFQ7M4L6 RNU6-602P-201ENST00000411155 105 ntBASIC1.12□□□□□ -2.23
SHFQ7M4L6 RNU6-177P-201ENST00000411257 104 ntBASIC1.12□□□□□ -2.23
SHFQ7M4L6 AL591704.2-201ENST00000421658 181 ntBASIC1.12□□□□□ -2.23
SHFQ7M4L6 Y_RNA.690-201ENST00000516603 95 ntBASIC1.12□□□□□ -2.23
SHFQ7M4L6 MIR2115-201ENST00000516657 100 ntBASIC1.12□□□□□ -2.23
SHFQ7M4L6 AC019288.1-201ENST00000557918 224 ntBASIC1.12□□□□□ -2.23
SHFQ7M4L6 AC021613.1-201ENST00000623880 111 ntBASIC1.12□□□□□ -2.23
SHFQ7M4L6 AC027335.2-201ENST00000624030 375 ntBASIC1.12□□□□□ -2.23
SHFQ7M4L6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.11□□□□□ -2.23
SHFQ7M4L6 Y_RNA.330-201ENST00000365230 109 ntBASIC1.11□□□□□ -2.23
SHFQ7M4L6 SNORD18B-201ENST00000365659 72 ntBASIC1.11□□□□□ -2.23
SHFQ7M4L6 MIR222-201ENST00000384992 110 ntBASIC1.11□□□□□ -2.23
SHFQ7M4L6 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
SHFQ7M4L6 RNU6-613P-201ENST00000410412 108 ntBASIC1.11□□□□□ -2.23
SHFQ7M4L6 AC244023.1-201ENST00000426884 112 ntBASIC1.11□□□□□ -2.23
SHFQ7M4L6 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.11□□□□□ -2.23
SHFQ7M4L6 RN7SL429P-201ENST00000479090 223 ntBASIC1.11□□□□□ -2.23
SHFQ7M4L6 RN7SL489P-201ENST00000486185 223 ntBASIC1.11□□□□□ -2.23
SHFQ7M4L6 RN7SL327P-201ENST00000488659 223 ntBASIC1.11□□□□□ -2.23
SHFQ7M4L6 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.11□□□□□ -2.23
SHFQ7M4L6 MIR3133-201ENST00000583157 78 ntBASIC1.11□□□□□ -2.23
SHFQ7M4L6 AC242498.1-201ENST00000604134 111 ntBASIC1.11□□□□□ -2.23
SHFQ7M4L6 RN7SL853P-201ENST00000617250 223 ntBASIC1.11□□□□□ -2.23
SHFQ7M4L6 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
SHFQ7M4L6 RNU6-939P-201ENST00000384634 107 ntBASIC1.1□□□□□ -2.23
SHFQ7M4L6 SNORD12-201ENST00000391002 90 ntBASIC1.1□□□□□ -2.23
SHFQ7M4L6 SNORA40.6-201ENST00000391153 128 ntBASIC1.1□□□□□ -2.23
SHFQ7M4L6 RNA5SP95-201ENST00000410319 137 ntBASIC1.1□□□□□ -2.23
SHFQ7M4L6 RPS3AP1-201ENST00000413190 320 ntBASIC1.1□□□□□ -2.23
SHFQ7M4L6 Y_RNA.703-201ENST00000516846 111 ntBASIC1.1□□□□□ -2.23
SHFQ7M4L6 AP001340.1-201ENST00000624405 217 ntBASIC1.1□□□□□ -2.23
SHFQ7M4L6 MIR6841-201ENST00000637129 72 ntBASIC1.1□□□□□ -2.23
SHFQ7M4L6 AC008163.1-202ENST00000636004 2889 ntBASIC1.1□□□□□ -2.23
SHFQ7M4L6 Y_RNA.430-201ENST00000384081 110 ntBASIC1.09□□□□□ -2.23
SHFQ7M4L6 RNU6-746P-201ENST00000384112 109 ntBASIC1.09□□□□□ -2.23
SHFQ7M4L6 SNORD38B-201ENST00000384690 67 ntBASIC1.09□□□□□ -2.23
SHFQ7M4L6 Y_RNA.568-201ENST00000384742 113 ntBASIC1.09□□□□□ -2.23
SHFQ7M4L6 MT-TN-201ENST00000387400 73 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 248.1 ms