Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 RPS29P28-201ENST00000446439 141 ntBASIC1.27□□□□□ -2.21
SYNE3Q6ZMZ3 RNU7-21P-201ENST00000459430 62 ntBASIC1.27□□□□□ -2.21
SYNE3Q6ZMZ3 AC107027.2-201ENST00000512197 115 ntBASIC1.27□□□□□ -2.21
SYNE3Q6ZMZ3 RNU6-998P-201ENST00000515894 101 ntBASIC1.27□□□□□ -2.21
SYNE3Q6ZMZ3 MIR3129-201ENST00000581095 76 ntBASIC1.27□□□□□ -2.21
SYNE3Q6ZMZ3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
SYNE3Q6ZMZ3 MIR103A2-201ENST00000362154 78 ntBASIC1.26□□□□□ -2.21
SYNE3Q6ZMZ3 RNU1-124P-201ENST00000363861 145 ntBASIC1.26□□□□□ -2.21
SYNE3Q6ZMZ3 Y_RNA.393-201ENST00000383936 102 ntBASIC1.26□□□□□ -2.21
SYNE3Q6ZMZ3 MIR499A-201ENST00000384903 122 ntBASIC1.26□□□□□ -2.21
SYNE3Q6ZMZ3 RNA5SP127-201ENST00000411051 133 ntBASIC1.26□□□□□ -2.21
SYNE3Q6ZMZ3 AC108059.2-201ENST00000434626 151 ntBASIC1.26□□□□□ -2.21
SYNE3Q6ZMZ3 SEPT7P4-201ENST00000437076 306 ntBASIC1.26□□□□□ -2.21
SYNE3Q6ZMZ3 SNORA70.22-201ENST00000517160 124 ntBASIC1.26□□□□□ -2.21
SYNE3Q6ZMZ3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.26□□□□□ -2.21
SYNE3Q6ZMZ3 MIR548AO-201ENST00000579992 96 ntBASIC1.26□□□□□ -2.21
SYNE3Q6ZMZ3 MIR8070-201ENST00000616510 88 ntBASIC1.26□□□□□ -2.21
SYNE3Q6ZMZ3 RNU6-1135P-201ENST00000411083 103 ntBASIC1.25□□□□□ -2.21
SYNE3Q6ZMZ3 RNU6-861P-201ENST00000516745 106 ntBASIC1.25□□□□□ -2.21
SYNE3Q6ZMZ3 SEPT14P17-201ENST00000617978 177 ntBASIC1.25□□□□□ -2.21
SYNE3Q6ZMZ3 RNU6-239P-201ENST00000390990 99 ntBASIC1.24□□□□□ -2.21
SYNE3Q6ZMZ3 RNU6-613P-201ENST00000410412 108 ntBASIC1.24□□□□□ -2.21
SYNE3Q6ZMZ3 AC006461.1-201ENST00000412637 326 ntBASIC1.24□□□□□ -2.21
SYNE3Q6ZMZ3 OR2A41P-201ENST00000473586 105 ntBASIC1.24□□□□□ -2.21
SYNE3Q6ZMZ3 RNU7-53P-201ENST00000516705 60 ntBASIC1.24□□□□□ -2.21
SYNE3Q6ZMZ3 SCARNA15-202ENST00000516881 127 ntBASIC1.24□□□□□ -2.21
SYNE3Q6ZMZ3 FTX_2.1-201ENST00000618816 94 ntBASIC1.24□□□□□ -2.21
SYNE3Q6ZMZ3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.24□□□□□ -2.21
SYNE3Q6ZMZ3 MIR377-201ENST00000362145 69 ntBASIC1.23□□□□□ -2.21
SYNE3Q6ZMZ3 SNORA25.3-201ENST00000363205 127 ntBASIC1.23□□□□□ -2.21
SYNE3Q6ZMZ3 SNORA25.7-201ENST00000364375 127 ntBASIC1.23□□□□□ -2.21
SYNE3Q6ZMZ3 MT-TN-201ENST00000387400 73 ntBASIC1.23□□□□□ -2.21
SYNE3Q6ZMZ3 MRPL35P3-201ENST00000421557 364 ntBASIC1.23□□□□□ -2.21
SYNE3Q6ZMZ3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.23□□□□□ -2.21
SYNE3Q6ZMZ3 RNU6-182P-201ENST00000516970 105 ntBASIC1.23□□□□□ -2.21
SYNE3Q6ZMZ3 MIR3646-201ENST00000578301 84 ntBASIC1.23□□□□□ -2.21
SYNE3Q6ZMZ3 HSPE1P19-201ENST00000603327 295 ntBASIC1.23□□□□□ -2.21
SYNE3Q6ZMZ3 SNORD114-21-201ENST00000606412 72 ntBASIC1.23□□□□□ -2.21
SYNE3Q6ZMZ3 Z97988.1-201ENST00000637697 135 ntBASIC1.23□□□□□ -2.21
SYNE3Q6ZMZ3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SYNE3Q6ZMZ3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.22□□□□□ -2.21
SYNE3Q6ZMZ3 Y_RNA.337-201ENST00000365312 102 ntBASIC1.22□□□□□ -2.21
SYNE3Q6ZMZ3 RNU6-768P-201ENST00000384683 107 ntBASIC1.22□□□□□ -2.21
SYNE3Q6ZMZ3 PCNPP3-201ENST00000393579 471 ntBASIC1.22□□□□□ -2.21
SYNE3Q6ZMZ3 AL035398.1-201ENST00000430869 322 ntBASIC1.22□□□□□ -2.21
SYNE3Q6ZMZ3 Y_RNA.662-201ENST00000516028 97 ntBASIC1.22□□□□□ -2.21
SYNE3Q6ZMZ3 RNA5SP404-201ENST00000517118 132 ntBASIC1.22□□□□□ -2.21
SYNE3Q6ZMZ3 AC090425.1-201ENST00000610007 140 ntBASIC1.22□□□□□ -2.21
SYNE3Q6ZMZ3 MIR8055-201ENST00000610739 97 ntBASIC1.22□□□□□ -2.21
SYNE3Q6ZMZ3 RNU6-913P-201ENST00000390913 95 ntBASIC1.21□□□□□ -2.22
SYNE3Q6ZMZ3 AC063976.4-201ENST00000421971 163 ntBASIC1.21□□□□□ -2.22
SYNE3Q6ZMZ3 MIR2115-201ENST00000516657 100 ntBASIC1.21□□□□□ -2.22
SYNE3Q6ZMZ3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.21□□□□□ -2.22
SYNE3Q6ZMZ3 AL020996.3-201ENST00000606617 222 ntBASIC1.21□□□□□ -2.22
SYNE3Q6ZMZ3 MIR6516-201ENST00000630554 81 ntBASIC1.21□□□□□ -2.22
SYNE3Q6ZMZ3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SYNE3Q6ZMZ3 AC002429.1-201ENST00000437672 148 ntBASIC1.2□□□□□ -2.22
SYNE3Q6ZMZ3 RNU7-67P-201ENST00000459003 62 ntBASIC1.2□□□□□ -2.22
SYNE3Q6ZMZ3 RNU7-90P-201ENST00000459216 62 ntBASIC1.2□□□□□ -2.22
SYNE3Q6ZMZ3 RNU7-80P-201ENST00000459562 61 ntBASIC1.2□□□□□ -2.22
SYNE3Q6ZMZ3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.2□□□□□ -2.22
SYNE3Q6ZMZ3 AC098479.1-201ENST00000609225 154 ntBASIC1.2□□□□□ -2.22
SYNE3Q6ZMZ3 RNU6-580P-201ENST00000365159 107 ntBASIC1.19□□□□□ -2.22
SYNE3Q6ZMZ3 Y_RNA.454-201ENST00000384224 113 ntBASIC1.19□□□□□ -2.22
SYNE3Q6ZMZ3 SNORA75.5-201ENST00000391291 81 ntBASIC1.19□□□□□ -2.22
SYNE3Q6ZMZ3 MIR548I3-201ENST00000408378 149 ntBASIC1.19□□□□□ -2.22
SYNE3Q6ZMZ3 MTND5P15-201ENST00000434246 349 ntBASIC1.19□□□□□ -2.22
SYNE3Q6ZMZ3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.19□□□□□ -2.22
SYNE3Q6ZMZ3 AC091932.4-201ENST00000623386 200 ntBASIC1.19□□□□□ -2.22
SYNE3Q6ZMZ3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
SYNE3Q6ZMZ3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
SYNE3Q6ZMZ3 RNU6-396P-201ENST00000365369 105 ntBASIC1.18□□□□□ -2.22
SYNE3Q6ZMZ3 Y_RNA.357-201ENST00000365487 109 ntBASIC1.18□□□□□ -2.22
SYNE3Q6ZMZ3 SNORA22-201ENST00000383907 134 ntBASIC1.18□□□□□ -2.22
SYNE3Q6ZMZ3 SNORA22C-201ENST00000384614 134 ntBASIC1.18□□□□□ -2.22
SYNE3Q6ZMZ3 Y_RNA.555-201ENST00000384673 110 ntBASIC1.18□□□□□ -2.22
SYNE3Q6ZMZ3 SNORA26.6-201ENST00000391256 115 ntBASIC1.18□□□□□ -2.22
SYNE3Q6ZMZ3 RNU2-11P-201ENST00000459191 187 ntBASIC1.18□□□□□ -2.22
SYNE3Q6ZMZ3 RNA5SP236-201ENST00000516169 116 ntBASIC1.18□□□□□ -2.22
SYNE3Q6ZMZ3 RNU6-958P-201ENST00000516995 106 ntBASIC1.18□□□□□ -2.22
SYNE3Q6ZMZ3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.18□□□□□ -2.22
SYNE3Q6ZMZ3 DNAJC19P2-201ENST00000593340 302 ntBASIC1.18□□□□□ -2.22
SYNE3Q6ZMZ3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SYNE3Q6ZMZ3 Y_RNA.272-201ENST00000364696 102 ntBASIC1.17□□□□□ -2.22
SYNE3Q6ZMZ3 RNU6-125P-201ENST00000384505 107 ntBASIC1.17□□□□□ -2.22
SYNE3Q6ZMZ3 Y_RNA.521-201ENST00000384560 114 ntBASIC1.17□□□□□ -2.22
SYNE3Q6ZMZ3 MIR222-201ENST00000384992 110 ntBASIC1.17□□□□□ -2.22
SYNE3Q6ZMZ3 Y_RNA.580-201ENST00000391004 95 ntBASIC1.17□□□□□ -2.22
SYNE3Q6ZMZ3 AC090844.1-201ENST00000422019 156 ntBASIC1.17□□□□□ -2.22
SYNE3Q6ZMZ3 AC074198.2-201ENST00000508153 258 ntBASIC1.17□□□□□ -2.22
SYNE3Q6ZMZ3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.17□□□□□ -2.22
SYNE3Q6ZMZ3 MIR4264-201ENST00000583520 66 ntBASIC1.17□□□□□ -2.22
SYNE3Q6ZMZ3 AC103810.9-201ENST00000606688 112 ntBASIC1.17□□□□□ -2.22
SYNE3Q6ZMZ3 MIR6504-201ENST00000613520 61 ntBASIC1.17□□□□□ -2.22
SYNE3Q6ZMZ3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SYNE3Q6ZMZ3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.16□□□□□ -2.22
SYNE3Q6ZMZ3 AC008163.1-202ENST00000636004 2889 ntBASIC1.16□□□□□ -2.22
SYNE3Q6ZMZ3 Y_RNA.52-201ENST00000362760 96 ntBASIC1.16□□□□□ -2.22
SYNE3Q6ZMZ3 Y_RNA.168-201ENST00000363740 102 ntBASIC1.16□□□□□ -2.22
SYNE3Q6ZMZ3 RNU6-654P-201ENST00000364373 107 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 245.3 ms