Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 AC011603.4-201ENST00000611325 277 ntBASIC1.6□□□□□ -2.15
KHDC1Q4VXA5 AC091895.1-201ENST00000624494 256 ntBASIC1.6□□□□□ -2.15
KHDC1Q4VXA5 AP000648.3-201ENST00000623539 4507 ntBASIC1.6□□□□□ -2.15
KHDC1Q4VXA5 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.6□□□□□ -2.15
KHDC1Q4VXA5 TMSB4XP3-201ENST00000445144 114 ntBASIC1.59□□□□□ -2.15
KHDC1Q4VXA5 AL022345.2-201ENST00000606307 135 ntBASIC1.59□□□□□ -2.15
KHDC1Q4VXA5 AL353997.5-201ENST00000618886 171 ntBASIC1.59□□□□□ -2.15
KHDC1Q4VXA5 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
KHDC1Q4VXA5 RNU6-349P-201ENST00000362402 107 ntBASIC1.58□□□□□ -2.16
KHDC1Q4VXA5 RNU6-997P-201ENST00000384725 107 ntBASIC1.58□□□□□ -2.16
KHDC1Q4VXA5 MIR1323-201ENST00000408090 73 ntBASIC1.58□□□□□ -2.16
KHDC1Q4VXA5 MIR4303-201ENST00000581299 66 ntBASIC1.58□□□□□ -2.16
KHDC1Q4VXA5 MIR539-201ENST00000365690 78 ntBASIC1.57□□□□□ -2.16
KHDC1Q4VXA5 RNU6-913P-201ENST00000390913 95 ntBASIC1.57□□□□□ -2.16
KHDC1Q4VXA5 RNU6-1054P-201ENST00000411293 104 ntBASIC1.57□□□□□ -2.16
KHDC1Q4VXA5 Y_RNA.651-201ENST00000459380 103 ntBASIC1.57□□□□□ -2.16
KHDC1Q4VXA5 RN7SKP88-201ENST00000516847 250 ntBASIC1.57□□□□□ -2.16
KHDC1Q4VXA5 DNAJC19P9-201ENST00000555084 351 ntBASIC1.57□□□□□ -2.16
KHDC1Q4VXA5 MIR3910-1-201ENST00000580936 111 ntBASIC1.57□□□□□ -2.16
KHDC1Q4VXA5 AL020996.3-201ENST00000606617 222 ntBASIC1.57□□□□□ -2.16
KHDC1Q4VXA5 MIR8055-201ENST00000610739 97 ntBASIC1.57□□□□□ -2.16
KHDC1Q4VXA5 7SK.8-201ENST00000612110 250 ntBASIC1.57□□□□□ -2.16
KHDC1Q4VXA5 7SK.11-201ENST00000615477 250 ntBASIC1.57□□□□□ -2.16
KHDC1Q4VXA5 7SK.13-201ENST00000622040 250 ntBASIC1.57□□□□□ -2.16
KHDC1Q4VXA5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.57□□□□□ -2.16
KHDC1Q4VXA5 RNU6-508P-201ENST00000363231 103 ntBASIC1.56□□□□□ -2.16
KHDC1Q4VXA5 RNY1P6-201ENST00000384193 109 ntBASIC1.56□□□□□ -2.16
KHDC1Q4VXA5 MIR320A-201ENST00000385302 82 ntBASIC1.56□□□□□ -2.16
KHDC1Q4VXA5 RNU6-1319P-201ENST00000390855 104 ntBASIC1.56□□□□□ -2.16
KHDC1Q4VXA5 RNU6-747P-201ENST00000390928 104 ntBASIC1.56□□□□□ -2.16
KHDC1Q4VXA5 RNU6-241P-201ENST00000391148 104 ntBASIC1.56□□□□□ -2.16
KHDC1Q4VXA5 RNA5SP261-201ENST00000410536 106 ntBASIC1.56□□□□□ -2.16
KHDC1Q4VXA5 RNU6-177P-201ENST00000411257 104 ntBASIC1.56□□□□□ -2.16
KHDC1Q4VXA5 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.56□□□□□ -2.16
KHDC1Q4VXA5 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.56□□□□□ -2.16
KHDC1Q4VXA5 AC009474.2-201ENST00000451383 136 ntBASIC1.56□□□□□ -2.16
KHDC1Q4VXA5 snoU13.25-201ENST00000458945 104 ntBASIC1.56□□□□□ -2.16
KHDC1Q4VXA5 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.56□□□□□ -2.16
KHDC1Q4VXA5 SNORA31.4-201ENST00000516049 129 ntBASIC1.56□□□□□ -2.16
KHDC1Q4VXA5 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.56□□□□□ -2.16
KHDC1Q4VXA5 CYP3A52P-201ENST00000563326 91 ntBASIC1.56□□□□□ -2.16
KHDC1Q4VXA5 MIR3152-201ENST00000579801 74 ntBASIC1.56□□□□□ -2.16
KHDC1Q4VXA5 MIR548AO-201ENST00000579992 96 ntBASIC1.56□□□□□ -2.16
KHDC1Q4VXA5 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
KHDC1Q4VXA5 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.55□□□□□ -2.16
KHDC1Q4VXA5 RNU6-81P-201ENST00000365608 104 ntBASIC1.55□□□□□ -2.16
KHDC1Q4VXA5 RNU4-61P-201ENST00000411243 107 ntBASIC1.55□□□□□ -2.16
KHDC1Q4VXA5 RNA5SP458-201ENST00000516188 119 ntBASIC1.55□□□□□ -2.16
KHDC1Q4VXA5 RNU6-789P-201ENST00000517105 102 ntBASIC1.55□□□□□ -2.16
KHDC1Q4VXA5 AP003716.2-201ENST00000528260 108 ntBASIC1.55□□□□□ -2.16
KHDC1Q4VXA5 AL645939.4-201ENST00000604495 135 ntBASIC1.55□□□□□ -2.16
KHDC1Q4VXA5 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KHDC1Q4VXA5 Y_RNA.114-201ENST00000363265 113 ntBASIC1.54□□□□□ -2.16
KHDC1Q4VXA5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.54□□□□□ -2.16
KHDC1Q4VXA5 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.54□□□□□ -2.16
KHDC1Q4VXA5 Y_RNA.280-201ENST00000364765 112 ntBASIC1.53□□□□□ -2.16
KHDC1Q4VXA5 SNORA26.6-201ENST00000391256 115 ntBASIC1.53□□□□□ -2.16
KHDC1Q4VXA5 RNU5E-3P-201ENST00000515913 68 ntBASIC1.53□□□□□ -2.16
KHDC1Q4VXA5 PRELID3BP2-201ENST00000605362 201 ntBASIC1.53□□□□□ -2.16
KHDC1Q4VXA5 MIR6717-201ENST00000622747 73 ntBASIC1.53□□□□□ -2.16
KHDC1Q4VXA5 AC021613.1-201ENST00000623880 111 ntBASIC1.53□□□□□ -2.16
KHDC1Q4VXA5 RNA5SP264-201ENST00000363115 107 ntBASIC1.52□□□□□ -2.17
KHDC1Q4VXA5 RNU6-647P-201ENST00000364243 107 ntBASIC1.52□□□□□ -2.17
KHDC1Q4VXA5 RNU6-690P-201ENST00000365242 106 ntBASIC1.52□□□□□ -2.17
KHDC1Q4VXA5 AC108667.1-201ENST00000428618 249 ntBASIC1.52□□□□□ -2.17
KHDC1Q4VXA5 AC245047.7-201ENST00000440265 293 ntBASIC1.52□□□□□ -2.17
KHDC1Q4VXA5 AL158147.1-201ENST00000443970 75 ntBASIC1.52□□□□□ -2.17
KHDC1Q4VXA5 RNU6-1211P-201ENST00000459179 105 ntBASIC1.52□□□□□ -2.17
KHDC1Q4VXA5 RNU11-2P-201ENST00000516898 142 ntBASIC1.52□□□□□ -2.17
KHDC1Q4VXA5 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.52□□□□□ -2.17
KHDC1Q4VXA5 BX248123.2-201ENST00000606318 124 ntBASIC1.52□□□□□ -2.17
KHDC1Q4VXA5 MIR8065-201ENST00000620577 100 ntBASIC1.52□□□□□ -2.17
KHDC1Q4VXA5 Z97988.1-201ENST00000637697 135 ntBASIC1.52□□□□□ -2.17
KHDC1Q4VXA5 AC132825.6-201ENST00000638861 357 ntBASIC1.52□□□□□ -2.17
KHDC1Q4VXA5 SNORA25.3-201ENST00000363205 127 ntBASIC1.51□□□□□ -2.17
KHDC1Q4VXA5 RNU1-42P-201ENST00000364033 160 ntBASIC1.51□□□□□ -2.17
KHDC1Q4VXA5 SNORA1.1-201ENST00000364671 133 ntBASIC1.51□□□□□ -2.17
KHDC1Q4VXA5 RNU6-60P-201ENST00000364792 103 ntBASIC1.51□□□□□ -2.17
KHDC1Q4VXA5 Y_RNA.294-201ENST00000364916 102 ntBASIC1.51□□□□□ -2.17
KHDC1Q4VXA5 Y_RNA.430-201ENST00000384081 110 ntBASIC1.51□□□□□ -2.17
KHDC1Q4VXA5 MIR1302-7-201ENST00000408841 72 ntBASIC1.51□□□□□ -2.17
KHDC1Q4VXA5 RNU4-62P-201ENST00000410125 130 ntBASIC1.51□□□□□ -2.17
KHDC1Q4VXA5 RNU6-893P-201ENST00000458841 100 ntBASIC1.51□□□□□ -2.17
KHDC1Q4VXA5 RNU7-45P-201ENST00000459460 63 ntBASIC1.51□□□□□ -2.17
KHDC1Q4VXA5 RNU6-240P-201ENST00000516098 97 ntBASIC1.51□□□□□ -2.17
KHDC1Q4VXA5 RNU6-971P-201ENST00000516920 106 ntBASIC1.51□□□□□ -2.17
KHDC1Q4VXA5 AC133485.4-201ENST00000561835 220 ntBASIC1.51□□□□□ -2.17
KHDC1Q4VXA5 AC138907.4-201ENST00000570107 226 ntBASIC1.51□□□□□ -2.17
KHDC1Q4VXA5 HSPE1P19-201ENST00000603327 295 ntBASIC1.51□□□□□ -2.17
KHDC1Q4VXA5 AP000942.3-201ENST00000603702 160 ntBASIC1.51□□□□□ -2.17
KHDC1Q4VXA5 RNU6-1190P-201ENST00000410811 104 ntBASIC1.5□□□□□ -2.17
KHDC1Q4VXA5 RPS3AP1-201ENST00000413190 320 ntBASIC1.5□□□□□ -2.17
KHDC1Q4VXA5 AC048334.1-201ENST00000477975 159 ntBASIC1.5□□□□□ -2.17
KHDC1Q4VXA5 RNU6-406P-201ENST00000516470 107 ntBASIC1.5□□□□□ -2.17
KHDC1Q4VXA5 AC108081.1-201ENST00000604358 221 ntBASIC1.5□□□□□ -2.17
KHDC1Q4VXA5 MIR7974-201ENST00000615835 79 ntBASIC1.5□□□□□ -2.17
KHDC1Q4VXA5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.49□□□□□ -2.17
KHDC1Q4VXA5 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.49□□□□□ -2.17
KHDC1Q4VXA5 MIR103A2-201ENST00000362154 78 ntBASIC1.49□□□□□ -2.17
KHDC1Q4VXA5 RNU6-396P-201ENST00000365369 105 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms