Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 SNORA16.1-201ENST00000364597 132 ntBASIC1.55□□□□□ -2.16
NKX6-1P78426 RNU6-746P-201ENST00000384112 109 ntBASIC1.55□□□□□ -2.16
NKX6-1P78426 Y_RNA.506-201ENST00000384494 102 ntBASIC1.55□□□□□ -2.16
NKX6-1P78426 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.55□□□□□ -2.16
NKX6-1P78426 RNU2-11P-201ENST00000459191 187 ntBASIC1.55□□□□□ -2.16
NKX6-1P78426 Y_RNA.703-201ENST00000516846 111 ntBASIC1.55□□□□□ -2.16
NKX6-1P78426 RNU6-165P-201ENST00000517170 99 ntBASIC1.55□□□□□ -2.16
NKX6-1P78426 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.55□□□□□ -2.16
NKX6-1P78426 MIR502-201ENST00000606349 86 ntBASIC1.55□□□□□ -2.16
NKX6-1P78426 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
NKX6-1P78426 Y_RNA.120-201ENST00000363304 110 ntBASIC1.54□□□□□ -2.16
NKX6-1P78426 Y_RNA.251-201ENST00000364551 99 ntBASIC1.54□□□□□ -2.16
NKX6-1P78426 RNU7-73P-201ENST00000458743 63 ntBASIC1.54□□□□□ -2.16
NKX6-1P78426 DNAJC19P9-201ENST00000555084 351 ntBASIC1.54□□□□□ -2.16
NKX6-1P78426 MIR4255-201ENST00000579351 72 ntBASIC1.54□□□□□ -2.16
NKX6-1P78426 AC091932.4-201ENST00000623386 200 ntBASIC1.54□□□□□ -2.16
NKX6-1P78426 Y_RNA.224-201ENST00000364308 111 ntBASIC1.53□□□□□ -2.16
NKX6-1P78426 RNA5SP261-201ENST00000410536 106 ntBASIC1.53□□□□□ -2.16
NKX6-1P78426 RNU7-197P-201ENST00000458836 62 ntBASIC1.53□□□□□ -2.16
NKX6-1P78426 BX248123.2-201ENST00000606318 124 ntBASIC1.53□□□□□ -2.16
NKX6-1P78426 AL512598.1-201ENST00000610158 273 ntBASIC1.53□□□□□ -2.16
NKX6-1P78426 RNU6-1054P-201ENST00000411293 104 ntBASIC1.52□□□□□ -2.17
NKX6-1P78426 RNU6-346P-201ENST00000516288 111 ntBASIC1.52□□□□□ -2.17
NKX6-1P78426 MIR4303-201ENST00000581299 66 ntBASIC1.52□□□□□ -2.17
NKX6-1P78426 U8.1-201ENST00000362843 134 ntBASIC1.51□□□□□ -2.17
NKX6-1P78426 RNU6-125P-201ENST00000384505 107 ntBASIC1.51□□□□□ -2.17
NKX6-1P78426 MIR569-201ENST00000385228 96 ntBASIC1.51□□□□□ -2.17
NKX6-1P78426 AC009474.2-201ENST00000451383 136 ntBASIC1.51□□□□□ -2.17
NKX6-1P78426 SNORA31.4-201ENST00000516049 129 ntBASIC1.51□□□□□ -2.17
NKX6-1P78426 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.51□□□□□ -2.17
NKX6-1P78426 AP001328.1-201ENST00000528550 176 ntBASIC1.51□□□□□ -2.17
NKX6-1P78426 MIR4419B-201ENST00000577260 68 ntBASIC1.51□□□□□ -2.17
NKX6-1P78426 MIR3152-201ENST00000579801 74 ntBASIC1.51□□□□□ -2.17
NKX6-1P78426 MIR3133-201ENST00000583157 78 ntBASIC1.51□□□□□ -2.17
NKX6-1P78426 RNA5SP363-201ENST00000365072 115 ntBASIC1.5□□□□□ -2.17
NKX6-1P78426 RNU6-997P-201ENST00000384725 107 ntBASIC1.5□□□□□ -2.17
NKX6-1P78426 RNU6-460P-201ENST00000391158 108 ntBASIC1.5□□□□□ -2.17
NKX6-1P78426 AC245047.7-201ENST00000440265 293 ntBASIC1.5□□□□□ -2.17
NKX6-1P78426 RNU6-970P-201ENST00000516312 107 ntBASIC1.5□□□□□ -2.17
NKX6-1P78426 Y_RNA.690-201ENST00000516603 95 ntBASIC1.5□□□□□ -2.17
NKX6-1P78426 AP001340.1-201ENST00000624405 217 ntBASIC1.5□□□□□ -2.17
NKX6-1P78426 MIR103A2-201ENST00000362154 78 ntBASIC1.49□□□□□ -2.17
NKX6-1P78426 RNA5SP264-201ENST00000363115 107 ntBASIC1.49□□□□□ -2.17
NKX6-1P78426 SNORA25.3-201ENST00000363205 127 ntBASIC1.49□□□□□ -2.17
NKX6-1P78426 RNU6-774P-201ENST00000363238 107 ntBASIC1.49□□□□□ -2.17
NKX6-1P78426 RNU6-915P-201ENST00000364943 103 ntBASIC1.49□□□□□ -2.17
NKX6-1P78426 Y_RNA.420-201ENST00000384043 110 ntBASIC1.49□□□□□ -2.17
NKX6-1P78426 SNORA20-201ENST00000384662 132 ntBASIC1.49□□□□□ -2.17
NKX6-1P78426 AL603914.1-201ENST00000401964 204 ntBASIC1.49□□□□□ -2.17
NKX6-1P78426 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.49□□□□□ -2.17
NKX6-1P78426 AC048334.1-201ENST00000477975 159 ntBASIC1.49□□□□□ -2.17
NKX6-1P78426 SNORA31.2-201ENST00000516019 134 ntBASIC1.49□□□□□ -2.17
NKX6-1P78426 RNA5SP236-201ENST00000516169 116 ntBASIC1.49□□□□□ -2.17
NKX6-1P78426 RNU6-426P-201ENST00000516464 97 ntBASIC1.49□□□□□ -2.17
NKX6-1P78426 Y_RNA.692-201ENST00000516627 105 ntBASIC1.49□□□□□ -2.17
NKX6-1P78426 MIR548AO-201ENST00000579992 96 ntBASIC1.49□□□□□ -2.17
NKX6-1P78426 AC011603.4-201ENST00000611325 277 ntBASIC1.49□□□□□ -2.17
NKX6-1P78426 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.49□□□□□ -2.17
NKX6-1P78426 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.48□□□□□ -2.17
NKX6-1P78426 RNY1P11-201ENST00000363759 113 ntBASIC1.48□□□□□ -2.17
NKX6-1P78426 SNORA1.1-201ENST00000364671 133 ntBASIC1.48□□□□□ -2.17
NKX6-1P78426 RNY1P6-201ENST00000384193 109 ntBASIC1.48□□□□□ -2.17
NKX6-1P78426 RNU7-95P-201ENST00000459222 64 ntBASIC1.48□□□□□ -2.17
NKX6-1P78426 RNU6-113P-201ENST00000516653 101 ntBASIC1.48□□□□□ -2.17
NKX6-1P78426 RNU11-2P-201ENST00000516898 142 ntBASIC1.48□□□□□ -2.17
NKX6-1P78426 Y_RNA.757-201ENST00000578934 114 ntBASIC1.48□□□□□ -2.17
NKX6-1P78426 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.48□□□□□ -2.17
NKX6-1P78426 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
NKX6-1P78426 AC010332.2-201ENST00000613083 1904 ntBASIC1.48□□□□□ -2.17
NKX6-1P78426 Y_RNA.327-201ENST00000365201 102 ntBASIC1.47□□□□□ -2.17
NKX6-1P78426 RNU6-396P-201ENST00000365369 105 ntBASIC1.47□□□□□ -2.17
NKX6-1P78426 Y_RNA.568-201ENST00000384742 113 ntBASIC1.47□□□□□ -2.17
NKX6-1P78426 RNU6-913P-201ENST00000390913 95 ntBASIC1.47□□□□□ -2.17
NKX6-1P78426 AL603908.1-201ENST00000406098 201 ntBASIC1.47□□□□□ -2.17
NKX6-1P78426 RNU6-893P-201ENST00000458841 100 ntBASIC1.47□□□□□ -2.17
NKX6-1P78426 MIR3618-201ENST00000580330 88 ntBASIC1.47□□□□□ -2.17
NKX6-1P78426 AL020996.3-201ENST00000606617 222 ntBASIC1.47□□□□□ -2.17
NKX6-1P78426 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.47□□□□□ -2.17
NKX6-1P78426 Y_RNA.354-201ENST00000365448 111 ntBASIC1.46□□□□□ -2.18
NKX6-1P78426 MIR613-201ENST00000385248 95 ntBASIC1.46□□□□□ -2.18
NKX6-1P78426 SNORA40-201ENST00000388090 126 ntBASIC1.46□□□□□ -2.18
NKX6-1P78426 RNU5E-3P-201ENST00000515913 68 ntBASIC1.46□□□□□ -2.18
NKX6-1P78426 Y_RNA.686-201ENST00000516548 134 ntBASIC1.46□□□□□ -2.18
NKX6-1P78426 RNU2-60P-201ENST00000517290 128 ntBASIC1.46□□□□□ -2.18
NKX6-1P78426 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.46□□□□□ -2.18
NKX6-1P78426 SNORD53B-201ENST00000577887 78 ntBASIC1.46□□□□□ -2.18
NKX6-1P78426 PRELID3BP2-201ENST00000605362 201 ntBASIC1.46□□□□□ -2.18
NKX6-1P78426 AL022345.2-201ENST00000606307 135 ntBASIC1.46□□□□□ -2.18
NKX6-1P78426 MIR8055-201ENST00000610739 97 ntBASIC1.46□□□□□ -2.18
NKX6-1P78426 TUG1_4.1-201ENST00000619464 181 ntBASIC1.46□□□□□ -2.18
NKX6-1P78426 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.46□□□□□ -2.18
NKX6-1P78426 SNORD48-201ENST00000364953 64 ntBASIC1.45□□□□□ -2.18
NKX6-1P78426 RNU6-690P-201ENST00000365242 106 ntBASIC1.45□□□□□ -2.18
NKX6-1P78426 SNORD50.2-201ENST00000365465 70 ntBASIC1.45□□□□□ -2.18
NKX6-1P78426 RNU6-1319P-201ENST00000390855 104 ntBASIC1.45□□□□□ -2.18
NKX6-1P78426 RNU6-747P-201ENST00000390928 104 ntBASIC1.45□□□□□ -2.18
NKX6-1P78426 RNU6-241P-201ENST00000391148 104 ntBASIC1.45□□□□□ -2.18
NKX6-1P78426 RNU6-177P-201ENST00000411257 104 ntBASIC1.45□□□□□ -2.18
NKX6-1P78426 RPS3AP1-201ENST00000413190 320 ntBASIC1.45□□□□□ -2.18
NKX6-1P78426 snoU13.25-201ENST00000458945 104 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 187.8 ms