Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
O00370 RNU6-1023P-201ENST00000516137 106 ntBASIC0.91□□□□□ -2.26
O00370 MIR4744-201ENST00000581563 82 ntBASIC0.91□□□□□ -2.26
O00370 AC131055.1-201ENST00000584626 316 ntBASIC0.91□□□□□ -2.26
O00370 AP000942.4-201ENST00000604811 241 ntBASIC0.91□□□□□ -2.26
O00370 AC211469.2-201ENST00000605461 205 ntBASIC0.91□□□□□ -2.26
O00370 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.9□□□□□ -2.27
O00370 RNU6-396P-201ENST00000365369 105 ntBASIC0.9□□□□□ -2.27
O00370 SNORA1-201ENST00000384107 130 ntBASIC0.9□□□□□ -2.27
O00370 RNU4-70P-201ENST00000384579 139 ntBASIC0.9□□□□□ -2.27
O00370 Y_RNA.571-201ENST00000384753 98 ntBASIC0.9□□□□□ -2.27
O00370 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.9□□□□□ -2.27
O00370 MIR1302-7-201ENST00000408841 72 ntBASIC0.9□□□□□ -2.27
O00370 RNU6-938P-201ENST00000411285 103 ntBASIC0.9□□□□□ -2.27
O00370 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.9□□□□□ -2.27
O00370 RNU4-71P-201ENST00000516258 113 ntBASIC0.9□□□□□ -2.27
O00370 RNA5SP153-201ENST00000516498 76 ntBASIC0.9□□□□□ -2.27
O00370 MIR2115-201ENST00000516657 100 ntBASIC0.9□□□□□ -2.27
O00370 RNU6-197P-201ENST00000516680 100 ntBASIC0.9□□□□□ -2.27
O00370 AP003716.2-201ENST00000528260 108 ntBASIC0.9□□□□□ -2.27
O00370 RNU1-36P-201ENST00000365130 165 ntBASIC0.89□□□□□ -2.27
O00370 RNU6-1189P-201ENST00000383958 107 ntBASIC0.89□□□□□ -2.27
O00370 Y_RNA.540-201ENST00000384638 111 ntBASIC0.89□□□□□ -2.27
O00370 RPS29P24-201ENST00000486345 171 ntBASIC0.89□□□□□ -2.27
O00370 MIR4308-201ENST00000580634 81 ntBASIC0.89□□□□□ -2.27
O00370 SNORD114-2-201ENST00000363953 78 ntBASIC0.88□□□□□ -2.27
O00370 MIR200A-201ENST00000384875 90 ntBASIC0.88□□□□□ -2.27
O00370 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
O00370 RNU6-578P-201ENST00000390980 103 ntBASIC0.88□□□□□ -2.27
O00370 SNORA40.5-201ENST00000391061 128 ntBASIC0.88□□□□□ -2.27
O00370 RNU2-64P-201ENST00000411315 191 ntBASIC0.88□□□□□ -2.27
O00370 HMGN1P33-201ENST00000432945 451 ntBASIC0.88□□□□□ -2.27
O00370 SEPT7P4-201ENST00000437076 306 ntBASIC0.88□□□□□ -2.27
O00370 AC067940.1-201ENST00000458411 300 ntBASIC0.88□□□□□ -2.27
O00370 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.88□□□□□ -2.27
O00370 PSMC1P5-201ENST00000512850 177 ntBASIC0.88□□□□□ -2.27
O00370 AC004817.2-201ENST00000561794 651 ntBASIC0.88□□□□□ -2.27
O00370 AC013244.2-201ENST00000603396 103 ntBASIC0.88□□□□□ -2.27
O00370 AP000753.3-201ENST00000604083 169 ntBASIC0.88□□□□□ -2.27
O00370 AC108706.1-201ENST00000611053 297 ntBASIC0.88□□□□□ -2.27
O00370 MIR302B-201ENST00000362188 73 ntBASIC0.87□□□□□ -2.27
O00370 Y_RNA.489-201ENST00000384410 101 ntBASIC0.87□□□□□ -2.27
O00370 MIR7-2-201ENST00000384970 110 ntBASIC0.87□□□□□ -2.27
O00370 MIR613-201ENST00000385248 95 ntBASIC0.87□□□□□ -2.27
O00370 SNORD89-201ENST00000390981 114 ntBASIC0.87□□□□□ -2.27
O00370 AC090844.1-201ENST00000422019 156 ntBASIC0.87□□□□□ -2.27
O00370 AL392103.1-201ENST00000447000 198 ntBASIC0.87□□□□□ -2.27
O00370 RNU2-11P-201ENST00000459191 187 ntBASIC0.87□□□□□ -2.27
O00370 snoU13.16-201ENST00000459350 104 ntBASIC0.87□□□□□ -2.27
O00370 RNU2-13P-201ENST00000515909 113 ntBASIC0.87□□□□□ -2.27
O00370 RNA5SP436-201ENST00000516020 115 ntBASIC0.87□□□□□ -2.27
O00370 RNU6-351P-201ENST00000516097 100 ntBASIC0.87□□□□□ -2.27
O00370 RNU7-53P-201ENST00000516705 60 ntBASIC0.87□□□□□ -2.27
O00370 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
O00370 Y_RNA.83-201ENST00000363005 113 ntBASIC0.86□□□□□ -2.27
O00370 Y_RNA.200-201ENST00000364018 102 ntBASIC0.86□□□□□ -2.27
O00370 RNU6-125P-201ENST00000384505 107 ntBASIC0.86□□□□□ -2.27
O00370 RNU6-913P-201ENST00000390913 95 ntBASIC0.86□□□□□ -2.27
O00370 AC006461.1-201ENST00000412637 326 ntBASIC0.86□□□□□ -2.27
O00370 RPS3AP1-201ENST00000413190 320 ntBASIC0.86□□□□□ -2.27
O00370 AL035398.1-201ENST00000430869 322 ntBASIC0.86□□□□□ -2.27
O00370 RNA5SP480-201ENST00000516840 109 ntBASIC0.86□□□□□ -2.27
O00370 RNU11-2P-201ENST00000516898 142 ntBASIC0.86□□□□□ -2.27
O00370 RNU6-1271P-201ENST00000517049 105 ntBASIC0.86□□□□□ -2.27
O00370 AC036111.3-201ENST00000526389 112 ntBASIC0.86□□□□□ -2.27
O00370 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.86□□□□□ -2.27
O00370 PVT1_3.1-201ENST00000620853 95 ntBASIC0.86□□□□□ -2.27
O00370 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
O00370 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
O00370 SNORD113.3-201ENST00000364630 78 ntBASIC0.85□□□□□ -2.27
O00370 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
O00370 SNORD77.3-201ENST00000391113 65 ntBASIC0.85□□□□□ -2.27
O00370 MIR548I3-201ENST00000408378 149 ntBASIC0.85□□□□□ -2.27
O00370 RNU6-1190P-201ENST00000410811 104 ntBASIC0.85□□□□□ -2.27
O00370 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
O00370 AC097639.2-201ENST00000603159 172 ntBASIC0.85□□□□□ -2.27
O00370 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.85□□□□□ -2.27
O00370 AL596211.1-201ENST00000569873 2277 ntBASIC0.84□□□□□ -2.27
O00370 MIR411-201ENST00000362239 96 ntBASIC0.84□□□□□ -2.27
O00370 Y_RNA.188-201ENST00000363952 111 ntBASIC0.84□□□□□ -2.27
O00370 SNORA1.1-201ENST00000364671 133 ntBASIC0.84□□□□□ -2.27
O00370 Y_RNA.351-201ENST00000365436 96 ntBASIC0.84□□□□□ -2.27
O00370 Y_RNA.410-201ENST00000383992 113 ntBASIC0.84□□□□□ -2.27
O00370 MIR598-201ENST00000384868 97 ntBASIC0.84□□□□□ -2.27
O00370 RNU6-613P-201ENST00000410412 108 ntBASIC0.84□□□□□ -2.27
O00370 AC015818.7-201ENST00000428754 109 ntBASIC0.84□□□□□ -2.27
O00370 FABP5P4-201ENST00000437203 171 ntBASIC0.84□□□□□ -2.27
O00370 AC087499.7-201ENST00000441958 109 ntBASIC0.84□□□□□ -2.27
O00370 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.84□□□□□ -2.27
O00370 RNU7-45P-201ENST00000459460 63 ntBASIC0.84□□□□□ -2.27
O00370 RNU7-96P-201ENST00000459535 64 ntBASIC0.84□□□□□ -2.27
O00370 RNU7-70P-201ENST00000516941 66 ntBASIC0.84□□□□□ -2.27
O00370 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.84□□□□□ -2.27
O00370 AC106800.4-201ENST00000614905 153 ntBASIC0.84□□□□□ -2.27
O00370 MIR376A2-201ENST00000636782 80 ntBASIC0.84□□□□□ -2.27
O00370 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.84□□□□□ -2.28
O00370 AC023934.1-201ENST00000574529 2389 ntBASIC0.83□□□□□ -2.28
O00370 RNU6-1020P-201ENST00000363684 107 ntBASIC0.83□□□□□ -2.28
O00370 RNU6-1335P-201ENST00000365426 107 ntBASIC0.83□□□□□ -2.28
O00370 RNU6-47P-201ENST00000383866 107 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms