Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MIR622-201ENST00000638396 96 ntBASIC3.26□□□□□ -1.89
SCUBE3Q8IX30 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SCUBE3Q8IX30 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
SCUBE3Q8IX30 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
SCUBE3Q8IX30 AP000648.3-201ENST00000623539 4507 ntBASIC3.25□□□□□ -1.89
SCUBE3Q8IX30 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
SCUBE3Q8IX30 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.25□□□□□ -1.89
SCUBE3Q8IX30 MIR449A-201ENST00000362113 91 ntBASIC3.25□□□□□ -1.89
SCUBE3Q8IX30 RNU6-461P-201ENST00000364195 107 ntBASIC3.25□□□□□ -1.89
SCUBE3Q8IX30 SNORA44-201ENST00000384584 132 ntBASIC3.25□□□□□ -1.89
SCUBE3Q8IX30 RNU7-48P-201ENST00000458875 63 ntBASIC3.25□□□□□ -1.89
SCUBE3Q8IX30 RPS27P29-201ENST00000463110 252 ntBASIC3.25□□□□□ -1.89
SCUBE3Q8IX30 SNORA25.13-201ENST00000516395 103 ntBASIC3.25□□□□□ -1.89
SCUBE3Q8IX30 RNU7-137P-201ENST00000516788 62 ntBASIC3.25□□□□□ -1.89
SCUBE3Q8IX30 MIR8065-201ENST00000620577 100 ntBASIC3.25□□□□□ -1.89
SCUBE3Q8IX30 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SCUBE3Q8IX30 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
SCUBE3Q8IX30 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.24□□□□□ -1.89
SCUBE3Q8IX30 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
SCUBE3Q8IX30 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.24□□□□□ -1.89
SCUBE3Q8IX30 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.24□□□□□ -1.89
SCUBE3Q8IX30 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SCUBE3Q8IX30 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SCUBE3Q8IX30 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SCUBE3Q8IX30 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.24□□□□□ -1.89
SCUBE3Q8IX30 SNORA2B-201ENST00000384583 137 ntBASIC3.23□□□□□ -1.89
SCUBE3Q8IX30 MIR29C-201ENST00000385231 88 ntBASIC3.23□□□□□ -1.89
SCUBE3Q8IX30 RNU6-602P-201ENST00000411155 105 ntBASIC3.23□□□□□ -1.89
SCUBE3Q8IX30 AC006483.1-201ENST00000487308 313 ntBASIC3.23□□□□□ -1.89
SCUBE3Q8IX30 AC008885.1-201ENST00000514930 301 ntBASIC3.23□□□□□ -1.89
SCUBE3Q8IX30 MIR3162-201ENST00000581818 82 ntBASIC3.23□□□□□ -1.89
SCUBE3Q8IX30 AL137790.1-201ENST00000634283 177 ntBASIC3.23□□□□□ -1.89
SCUBE3Q8IX30 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SCUBE3Q8IX30 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SCUBE3Q8IX30 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SCUBE3Q8IX30 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
SCUBE3Q8IX30 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SCUBE3Q8IX30 RNU6-805P-201ENST00000365643 106 ntBASIC3.22□□□□□ -1.89
SCUBE3Q8IX30 RNU1-109P-201ENST00000383960 147 ntBASIC3.22□□□□□ -1.89
SCUBE3Q8IX30 RN7SKP220-201ENST00000410611 288 ntBASIC3.22□□□□□ -1.89
SCUBE3Q8IX30 RNA5SP380-201ENST00000517190 98 ntBASIC3.22□□□□□ -1.89
SCUBE3Q8IX30 Z97988.1-201ENST00000637697 135 ntBASIC3.22□□□□□ -1.89
SCUBE3Q8IX30 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
SCUBE3Q8IX30 MIR22-201ENST00000362190 85 ntBASIC3.21□□□□□ -1.9
SCUBE3Q8IX30 Y_RNA.57-201ENST00000362806 113 ntBASIC3.21□□□□□ -1.9
SCUBE3Q8IX30 RNU6-478P-201ENST00000363904 110 ntBASIC3.21□□□□□ -1.9
SCUBE3Q8IX30 SNORA54-201ENST00000384281 123 ntBASIC3.21□□□□□ -1.9
SCUBE3Q8IX30 AC104332.2-201ENST00000429959 156 ntBASIC3.21□□□□□ -1.9
SCUBE3Q8IX30 AC087499.7-201ENST00000441958 109 ntBASIC3.21□□□□□ -1.9
SCUBE3Q8IX30 AC004223.1-201ENST00000479840 271 ntBASIC3.21□□□□□ -1.9
SCUBE3Q8IX30 RN7SL20P-201ENST00000488827 297 ntBASIC3.21□□□□□ -1.9
SCUBE3Q8IX30 SCARNA16.3-201ENST00000516595 184 ntBASIC3.21□□□□□ -1.9
SCUBE3Q8IX30 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.21□□□□□ -1.9
SCUBE3Q8IX30 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SCUBE3Q8IX30 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SCUBE3Q8IX30 RNU6-624P-201ENST00000363411 107 ntBASIC3.2□□□□□ -1.9
SCUBE3Q8IX30 MIR526A1-201ENST00000384897 85 ntBASIC3.2□□□□□ -1.9
SCUBE3Q8IX30 RNA5SP293-201ENST00000410527 113 ntBASIC3.2□□□□□ -1.9
SCUBE3Q8IX30 Z98742.3-201ENST00000418637 326 ntBASIC3.2□□□□□ -1.9
SCUBE3Q8IX30 RNU6-523P-201ENST00000516304 54 ntBASIC3.2□□□□□ -1.9
SCUBE3Q8IX30 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.2□□□□□ -1.9
SCUBE3Q8IX30 AL449363.1-201ENST00000617815 186 ntBASIC3.2□□□□□ -1.9
SCUBE3Q8IX30 AP001362.1-201ENST00000625165 124 ntBASIC3.2□□□□□ -1.9
SCUBE3Q8IX30 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.2□□□□□ -1.9
SCUBE3Q8IX30 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SCUBE3Q8IX30 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.2□□□□□ -1.9
SCUBE3Q8IX30 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SCUBE3Q8IX30 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SCUBE3Q8IX30 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SCUBE3Q8IX30 AC093831.2-201ENST00000624393 3427 ntBASIC3.19□□□□□ -1.9
SCUBE3Q8IX30 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCUBE3Q8IX30 MIR148B-201ENST00000362252 99 ntBASIC3.19□□□□□ -1.9
SCUBE3Q8IX30 RPL23AP6-201ENST00000446637 472 ntBASIC3.19□□□□□ -1.9
SCUBE3Q8IX30 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.19□□□□□ -1.9
SCUBE3Q8IX30 AC007318.2-201ENST00000620999 243 ntBASIC3.19□□□□□ -1.9
SCUBE3Q8IX30 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.19□□□□□ -1.9
SCUBE3Q8IX30 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
SCUBE3Q8IX30 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SCUBE3Q8IX30 SNORA71.1-201ENST00000364523 117 ntBASIC3.18□□□□□ -1.9
SCUBE3Q8IX30 BX510359.4-201ENST00000423750 193 ntBASIC3.18□□□□□ -1.9
SCUBE3Q8IX30 AL450471.1-201ENST00000447509 127 ntBASIC3.18□□□□□ -1.9
SCUBE3Q8IX30 SNORD4B-201ENST00000459083 72 ntBASIC3.18□□□□□ -1.9
SCUBE3Q8IX30 AL513423.1-201ENST00000621695 132 ntBASIC3.18□□□□□ -1.9
SCUBE3Q8IX30 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
SCUBE3Q8IX30 AC073325.2-201ENST00000339545 159 ntBASIC3.17□□□□□ -1.9
SCUBE3Q8IX30 RNU4-32P-201ENST00000363404 141 ntBASIC3.17□□□□□ -1.9
SCUBE3Q8IX30 SNORA46-201ENST00000384762 135 ntBASIC3.17□□□□□ -1.9
SCUBE3Q8IX30 SNORD14A-201ENST00000606526 91 ntBASIC3.17□□□□□ -1.9
SCUBE3Q8IX30 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SCUBE3Q8IX30 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SCUBE3Q8IX30 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SCUBE3Q8IX30 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
SCUBE3Q8IX30 RNA5SP133-201ENST00000363368 119 ntBASIC3.16□□□□□ -1.9
SCUBE3Q8IX30 RNA5SP274-201ENST00000410484 108 ntBASIC3.16□□□□□ -1.9
SCUBE3Q8IX30 RNA5SP385-201ENST00000515947 110 ntBASIC3.16□□□□□ -1.9
SCUBE3Q8IX30 RN7SKP132-201ENST00000516001 208 ntBASIC3.16□□□□□ -1.9
SCUBE3Q8IX30 SNORA74.3-201ENST00000517108 154 ntBASIC3.16□□□□□ -1.9
SCUBE3Q8IX30 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC3.16□□□□□ -1.9
SCUBE3Q8IX30 MIR8066-201ENST00000617280 78 ntBASIC3.16□□□□□ -1.9
SCUBE3Q8IX30 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 260.2 ms