Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 Y_RNA.494-201ENST00000384432 111 ntBASIC2.07□□□□□ -2.08
KRT40Q6A162 RNU6-950P-201ENST00000384651 107 ntBASIC2.07□□□□□ -2.08
KRT40Q6A162 RNU2-7P-201ENST00000410794 178 ntBASIC2.07□□□□□ -2.08
KRT40Q6A162 AC015922.2-201ENST00000435593 184 ntBASIC2.07□□□□□ -2.08
KRT40Q6A162 MTATP6P21-201ENST00000440681 189 ntBASIC2.07□□□□□ -2.08
KRT40Q6A162 snoU13.27-201ENST00000459278 104 ntBASIC2.07□□□□□ -2.08
KRT40Q6A162 RNU7-34P-201ENST00000459394 64 ntBASIC2.07□□□□□ -2.08
KRT40Q6A162 AC055731.1-201ENST00000474387 401 ntBASIC2.07□□□□□ -2.08
KRT40Q6A162 RN7SKP19-201ENST00000516016 252 ntBASIC2.07□□□□□ -2.08
KRT40Q6A162 RNU6-1061P-201ENST00000516530 99 ntBASIC2.07□□□□□ -2.08
KRT40Q6A162 AP003484.1-201ENST00000530974 250 ntBASIC2.07□□□□□ -2.08
KRT40Q6A162 AC133485.4-201ENST00000561835 220 ntBASIC2.07□□□□□ -2.08
KRT40Q6A162 AC138907.4-201ENST00000570107 226 ntBASIC2.07□□□□□ -2.08
KRT40Q6A162 SNORA2.2-201ENST00000365473 135 ntBASIC2.06□□□□□ -2.08
KRT40Q6A162 RNU6-44P-201ENST00000384045 107 ntBASIC2.06□□□□□ -2.08
KRT40Q6A162 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.06□□□□□ -2.08
KRT40Q6A162 RNU7-12P-201ENST00000516030 62 ntBASIC2.06□□□□□ -2.08
KRT40Q6A162 SNORA31.4-201ENST00000516049 129 ntBASIC2.06□□□□□ -2.08
KRT40Q6A162 RNU6-830P-201ENST00000516353 107 ntBASIC2.06□□□□□ -2.08
KRT40Q6A162 RNU2-19P-201ENST00000517288 84 ntBASIC2.06□□□□□ -2.08
KRT40Q6A162 MIR4529-201ENST00000578110 78 ntBASIC2.06□□□□□ -2.08
KRT40Q6A162 SNORA4-201ENST00000584302 138 ntBASIC2.06□□□□□ -2.08
KRT40Q6A162 MIR6129-201ENST00000616087 109 ntBASIC2.06□□□□□ -2.08
KRT40Q6A162 AC084768.2-201ENST00000622736 221 ntBASIC2.06□□□□□ -2.08
KRT40Q6A162 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRT40Q6A162 SNORD48-201ENST00000364953 64 ntBASIC2.05□□□□□ -2.08
KRT40Q6A162 Y_RNA.366-201ENST00000365540 102 ntBASIC2.05□□□□□ -2.08
KRT40Q6A162 RNU6-1144P-201ENST00000384247 104 ntBASIC2.05□□□□□ -2.08
KRT40Q6A162 RNU6-476P-201ENST00000384726 107 ntBASIC2.05□□□□□ -2.08
KRT40Q6A162 MIR526A1-201ENST00000384897 85 ntBASIC2.05□□□□□ -2.08
KRT40Q6A162 RNU6-1064P-201ENST00000410626 104 ntBASIC2.05□□□□□ -2.08
KRT40Q6A162 MIR4709-201ENST00000577272 72 ntBASIC2.05□□□□□ -2.08
KRT40Q6A162 MIR3683-201ENST00000580847 82 ntBASIC2.05□□□□□ -2.08
KRT40Q6A162 uc_338.20-201ENST00000621563 178 ntBASIC2.05□□□□□ -2.08
KRT40Q6A162 AL391516.1-201ENST00000554380 2449 ntBASIC2.05□□□□□ -2.08
KRT40Q6A162 RNU6-349P-201ENST00000362402 107 ntBASIC2.04□□□□□ -2.08
KRT40Q6A162 RNU6-1056P-201ENST00000383996 107 ntBASIC2.04□□□□□ -2.08
KRT40Q6A162 SNORD38C-201ENST00000384381 69 ntBASIC2.04□□□□□ -2.08
KRT40Q6A162 MIR516B2-201ENST00000385190 85 ntBASIC2.04□□□□□ -2.08
KRT40Q6A162 AL035461.1-201ENST00000421490 332 ntBASIC2.04□□□□□ -2.08
KRT40Q6A162 AC087499.4-201ENST00000448505 178 ntBASIC2.04□□□□□ -2.08
KRT40Q6A162 RNA5SP481-201ENST00000516814 122 ntBASIC2.04□□□□□ -2.08
KRT40Q6A162 MIR4778-201ENST00000577635 80 ntBASIC2.04□□□□□ -2.08
KRT40Q6A162 U1.36-201ENST00000620684 176 ntBASIC2.04□□□□□ -2.08
KRT40Q6A162 AL513423.1-201ENST00000621695 132 ntBASIC2.04□□□□□ -2.08
KRT40Q6A162 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.03□□□□□ -2.08
KRT40Q6A162 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
KRT40Q6A162 MIR660-201ENST00000385235 97 ntBASIC2.03□□□□□ -2.08
KRT40Q6A162 PGBD4P5-201ENST00000445958 426 ntBASIC2.03□□□□□ -2.08
KRT40Q6A162 RPS26P48-201ENST00000491713 339 ntBASIC2.03□□□□□ -2.08
KRT40Q6A162 RNU6-240P-201ENST00000516098 97 ntBASIC2.03□□□□□ -2.08
KRT40Q6A162 RNU6-919P-201ENST00000516731 104 ntBASIC2.03□□□□□ -2.08
KRT40Q6A162 RNU7-181P-201ENST00000517234 74 ntBASIC2.03□□□□□ -2.08
KRT40Q6A162 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.03□□□□□ -2.08
KRT40Q6A162 U6.95-201ENST00000636931 70 ntBASIC2.03□□□□□ -2.08
KRT40Q6A162 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRT40Q6A162 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
KRT40Q6A162 Y_RNA.540-201ENST00000384638 111 ntBASIC2.02□□□□□ -2.09
KRT40Q6A162 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.02□□□□□ -2.09
KRT40Q6A162 RNU6-113P-201ENST00000516653 101 ntBASIC2.02□□□□□ -2.09
KRT40Q6A162 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.02□□□□□ -2.09
KRT40Q6A162 RNA5SP276-201ENST00000362580 94 ntBASIC2.01□□□□□ -2.09
KRT40Q6A162 RNU6-203P-201ENST00000384038 104 ntBASIC2.01□□□□□ -2.09
KRT40Q6A162 RNY4P18-201ENST00000391107 89 ntBASIC2.01□□□□□ -2.09
KRT40Q6A162 RNA5SP233-201ENST00000459153 113 ntBASIC2.01□□□□□ -2.09
KRT40Q6A162 RNU7-95P-201ENST00000459222 64 ntBASIC2.01□□□□□ -2.09
KRT40Q6A162 RNA5SP480-201ENST00000516840 109 ntBASIC2.01□□□□□ -2.09
KRT40Q6A162 DNAJC19P9-201ENST00000555084 351 ntBASIC2.01□□□□□ -2.09
KRT40Q6A162 MTND5P34-201ENST00000568888 325 ntBASIC2.01□□□□□ -2.09
KRT40Q6A162 AC025166.1-201ENST00000612411 163 ntBASIC2.01□□□□□ -2.09
KRT40Q6A162 AC091932.4-201ENST00000623386 200 ntBASIC2.01□□□□□ -2.09
KRT40Q6A162 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.01□□□□□ -2.09
KRT40Q6A162 MIR424-201ENST00000362227 98 ntBASIC2□□□□□ -2.09
KRT40Q6A162 RNA5SP325-201ENST00000363756 130 ntBASIC2□□□□□ -2.09
KRT40Q6A162 MIR676-201ENST00000390702 67 ntBASIC2□□□□□ -2.09
KRT40Q6A162 U8.17-201ENST00000391292 132 ntBASIC2□□□□□ -2.09
KRT40Q6A162 MIR1263-201ENST00000408324 86 ntBASIC2□□□□□ -2.09
KRT40Q6A162 RNU6-589P-201ENST00000516485 107 ntBASIC2□□□□□ -2.09
KRT40Q6A162 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2□□□□□ -2.09
KRT40Q6A162 SNORA18.7-201ENST00000516910 131 ntBASIC2□□□□□ -2.09
KRT40Q6A162 AC090821.2-201ENST00000523552 176 ntBASIC2□□□□□ -2.09
KRT40Q6A162 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2□□□□□ -2.09
KRT40Q6A162 MIR3618-201ENST00000580330 88 ntBASIC2□□□□□ -2.09
KRT40Q6A162 HSPE1P19-201ENST00000603327 295 ntBASIC2□□□□□ -2.09
KRT40Q6A162 AL137067.1-201ENST00000615933 120 ntBASIC2□□□□□ -2.09
KRT40Q6A162 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
KRT40Q6A162 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
KRT40Q6A162 MTND5P18-201ENST00000445624 1801 ntBASIC2□□□□□ -2.09
KRT40Q6A162 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2□□□□□ -2.09
KRT40Q6A162 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
KRT40Q6A162 Y_RNA.241-201ENST00000364470 117 ntBASIC1.99□□□□□ -2.09
KRT40Q6A162 Y_RNA.351-201ENST00000365436 96 ntBASIC1.99□□□□□ -2.09
KRT40Q6A162 MIR194-1-201ENST00000384892 85 ntBASIC1.99□□□□□ -2.09
KRT40Q6A162 MIR452-201ENST00000385020 85 ntBASIC1.99□□□□□ -2.09
KRT40Q6A162 MIR1276-201ENST00000408707 83 ntBASIC1.99□□□□□ -2.09
KRT40Q6A162 RNU6-250P-201ENST00000516958 103 ntBASIC1.99□□□□□ -2.09
KRT40Q6A162 AC024614.2-201ENST00000577584 372 ntBASIC1.99□□□□□ -2.09
KRT40Q6A162 AL670379.3-201ENST00000605040 251 ntBASIC1.99□□□□□ -2.09
KRT40Q6A162 SNORD3E-202ENST00000627253 216 ntBASIC1.99□□□□□ -2.09
KRT40Q6A162 AC095038.3-201ENST00000634439 195 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms