Protein–RNA interactions for Protein: Q16649

NFIL3, Nuclear factor interleukin-3-regulated protein, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3Q16649 MTND1P7-201ENST00000632801 297 ntBASIC1.19□□□□□ -2.22
NFIL3Q16649 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
NFIL3Q16649 Y_RNA.7-201ENST00000362352 102 ntBASIC1.18□□□□□ -2.22
NFIL3Q16649 Y_RNA.241-201ENST00000364470 117 ntBASIC1.18□□□□□ -2.22
NFIL3Q16649 SNORA70.7-201ENST00000384159 133 ntBASIC1.18□□□□□ -2.22
NFIL3Q16649 SNORA40.5-201ENST00000391061 128 ntBASIC1.18□□□□□ -2.22
NFIL3Q16649 RNU6-493P-201ENST00000391321 108 ntBASIC1.18□□□□□ -2.22
NFIL3Q16649 RNU7-90P-201ENST00000459216 62 ntBASIC1.18□□□□□ -2.22
NFIL3Q16649 MIR4308-201ENST00000580634 81 ntBASIC1.18□□□□□ -2.22
NFIL3Q16649 SEPT14P17-201ENST00000617978 177 ntBASIC1.18□□□□□ -2.22
NFIL3Q16649 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.17□□□□□ -2.22
NFIL3Q16649 AC008163.1-202ENST00000636004 2889 ntBASIC1.17□□□□□ -2.22
NFIL3Q16649 Y_RNA.121-201ENST00000363309 113 ntBASIC1.17□□□□□ -2.22
NFIL3Q16649 RNU6-53P-201ENST00000365367 106 ntBASIC1.17□□□□□ -2.22
NFIL3Q16649 RNU6-578P-201ENST00000390980 103 ntBASIC1.17□□□□□ -2.22
NFIL3Q16649 AF228730.3-201ENST00000436691 102 ntBASIC1.17□□□□□ -2.22
NFIL3Q16649 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.17□□□□□ -2.22
NFIL3Q16649 AP003484.1-201ENST00000530974 250 ntBASIC1.17□□□□□ -2.22
NFIL3Q16649 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.17□□□□□ -2.22
NFIL3Q16649 Y_RNA.23-201ENST00000362496 106 ntBASIC1.16□□□□□ -2.22
NFIL3Q16649 RNU6-923P-201ENST00000364753 107 ntBASIC1.16□□□□□ -2.22
NFIL3Q16649 OR2A41P-201ENST00000473586 105 ntBASIC1.16□□□□□ -2.22
NFIL3Q16649 SNORA18.4-201ENST00000516440 124 ntBASIC1.16□□□□□ -2.22
NFIL3Q16649 MIR548AO-201ENST00000579992 96 ntBASIC1.16□□□□□ -2.22
NFIL3Q16649 AP000942.4-201ENST00000604811 241 ntBASIC1.16□□□□□ -2.22
NFIL3Q16649 AC108706.1-201ENST00000611053 297 ntBASIC1.16□□□□□ -2.22
NFIL3Q16649 Y_RNA.118-201ENST00000363300 101 ntBASIC1.15□□□□□ -2.23
NFIL3Q16649 Y_RNA.410-201ENST00000383992 113 ntBASIC1.15□□□□□ -2.23
NFIL3Q16649 Y_RNA.489-201ENST00000384410 101 ntBASIC1.15□□□□□ -2.23
NFIL3Q16649 Y_RNA.571-201ENST00000384753 98 ntBASIC1.15□□□□□ -2.23
NFIL3Q16649 SNORA79-201ENST00000408376 140 ntBASIC1.15□□□□□ -2.23
NFIL3Q16649 SNORD36C-201ENST00000516733 66 ntBASIC1.15□□□□□ -2.23
NFIL3Q16649 RNU2-4P-201ENST00000606190 192 ntBASIC1.15□□□□□ -2.23
NFIL3Q16649 SNORD114-21-201ENST00000606412 72 ntBASIC1.15□□□□□ -2.23
NFIL3Q16649 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
NFIL3Q16649 Y_RNA.401-201ENST00000383965 117 ntBASIC1.14□□□□□ -2.23
NFIL3Q16649 SNORA27-201ENST00000384323 126 ntBASIC1.14□□□□□ -2.23
NFIL3Q16649 Y_RNA.618-201ENST00000410949 107 ntBASIC1.14□□□□□ -2.23
NFIL3Q16649 AL121914.1-201ENST00000450188 156 ntBASIC1.14□□□□□ -2.23
NFIL3Q16649 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.14□□□□□ -2.23
NFIL3Q16649 AC009779.6-201ENST00000603972 165 ntBASIC1.14□□□□□ -2.23
NFIL3Q16649 MIR6516-201ENST00000630554 81 ntBASIC1.14□□□□□ -2.23
NFIL3Q16649 Y_RNA.200-201ENST00000364018 102 ntBASIC1.13□□□□□ -2.23
NFIL3Q16649 Y_RNA.330-201ENST00000365230 109 ntBASIC1.13□□□□□ -2.23
NFIL3Q16649 SNORA1-201ENST00000384107 130 ntBASIC1.13□□□□□ -2.23
NFIL3Q16649 MIR1276-201ENST00000408707 83 ntBASIC1.13□□□□□ -2.23
NFIL3Q16649 MRPL35P3-201ENST00000421557 364 ntBASIC1.13□□□□□ -2.23
NFIL3Q16649 snoU13.16-201ENST00000459350 104 ntBASIC1.13□□□□□ -2.23
NFIL3Q16649 Y_RNA.797-201ENST00000515977 94 ntBASIC1.13□□□□□ -2.23
NFIL3Q16649 RNA5SP102-201ENST00000516865 106 ntBASIC1.13□□□□□ -2.23
NFIL3Q16649 MIR4295-201ENST00000585286 85 ntBASIC1.13□□□□□ -2.23
NFIL3Q16649 Y_RNA.188-201ENST00000363952 111 ntBASIC1.12□□□□□ -2.23
NFIL3Q16649 Y_RNA.542-201ENST00000384641 111 ntBASIC1.12□□□□□ -2.23
NFIL3Q16649 MT-TG-201ENST00000387429 68 ntBASIC1.12□□□□□ -2.23
NFIL3Q16649 SNORD77.3-201ENST00000391113 65 ntBASIC1.12□□□□□ -2.23
NFIL3Q16649 RNU6-918P-201ENST00000391219 106 ntBASIC1.12□□□□□ -2.23
NFIL3Q16649 RNU7-67P-201ENST00000459003 62 ntBASIC1.12□□□□□ -2.23
NFIL3Q16649 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.12□□□□□ -2.23
NFIL3Q16649 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.12□□□□□ -2.23
NFIL3Q16649 AC103810.9-201ENST00000606688 112 ntBASIC1.12□□□□□ -2.23
NFIL3Q16649 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.12□□□□□ -2.23
NFIL3Q16649 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
NFIL3Q16649 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.11□□□□□ -2.23
NFIL3Q16649 MIR411-201ENST00000362239 96 ntBASIC1.11□□□□□ -2.23
NFIL3Q16649 Y_RNA.83-201ENST00000363005 113 ntBASIC1.11□□□□□ -2.23
NFIL3Q16649 SNORD114-27-201ENST00000363766 70 ntBASIC1.11□□□□□ -2.23
NFIL3Q16649 Y_RNA.191-201ENST00000363972 113 ntBASIC1.11□□□□□ -2.23
NFIL3Q16649 RNU4-38P-201ENST00000364472 129 ntBASIC1.11□□□□□ -2.23
NFIL3Q16649 RNU6-396P-201ENST00000365369 105 ntBASIC1.11□□□□□ -2.23
NFIL3Q16649 RNU6-1189P-201ENST00000383958 107 ntBASIC1.11□□□□□ -2.23
NFIL3Q16649 Y_RNA.435-201ENST00000384095 112 ntBASIC1.11□□□□□ -2.23
NFIL3Q16649 RNU4-70P-201ENST00000384579 139 ntBASIC1.11□□□□□ -2.23
NFIL3Q16649 MIR200A-201ENST00000384875 90 ntBASIC1.11□□□□□ -2.23
NFIL3Q16649 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
NFIL3Q16649 RNU6-613P-201ENST00000410412 108 ntBASIC1.11□□□□□ -2.23
NFIL3Q16649 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.11□□□□□ -2.23
NFIL3Q16649 RNU7-73P-201ENST00000458743 63 ntBASIC1.11□□□□□ -2.23
NFIL3Q16649 SNORD124-201ENST00000459577 104 ntBASIC1.11□□□□□ -2.23
NFIL3Q16649 AC087343.1-201ENST00000477341 475 ntBASIC1.11□□□□□ -2.23
NFIL3Q16649 RPS29P24-201ENST00000486345 171 ntBASIC1.11□□□□□ -2.23
NFIL3Q16649 MIR2115-201ENST00000516657 100 ntBASIC1.11□□□□□ -2.23
NFIL3Q16649 RNU6-958P-201ENST00000516995 106 ntBASIC1.11□□□□□ -2.23
NFIL3Q16649 AC131055.1-201ENST00000584626 316 ntBASIC1.11□□□□□ -2.23
NFIL3Q16649 MIR6504-201ENST00000613520 61 ntBASIC1.11□□□□□ -2.23
NFIL3Q16649 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.11□□□□□ -2.23
NFIL3Q16649 Y_RNA.182-201ENST00000363880 111 ntBASIC1.1□□□□□ -2.23
NFIL3Q16649 RNU6-1292P-201ENST00000383856 107 ntBASIC1.1□□□□□ -2.23
NFIL3Q16649 Y_RNA.440-201ENST00000384120 114 ntBASIC1.1□□□□□ -2.23
NFIL3Q16649 RNU6-1271P-201ENST00000517049 105 ntBASIC1.1□□□□□ -2.23
NFIL3Q16649 AC036111.3-201ENST00000526389 112 ntBASIC1.1□□□□□ -2.23
NFIL3Q16649 MIR378D2-201ENST00000580636 98 ntBASIC1.1□□□□□ -2.23
NFIL3Q16649 AL365205.2-201ENST00000594586 68 ntBASIC1.1□□□□□ -2.23
NFIL3Q16649 HSPE1P19-201ENST00000603327 295 ntBASIC1.1□□□□□ -2.23
NFIL3Q16649 Z83818.1-201ENST00000603584 150 ntBASIC1.1□□□□□ -2.23
NFIL3Q16649 MIR7111-201ENST00000619751 72 ntBASIC1.1□□□□□ -2.23
NFIL3Q16649 AL391516.1-201ENST00000554380 2449 ntBASIC1.1□□□□□ -2.23
NFIL3Q16649 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
NFIL3Q16649 Y_RNA.75-201ENST00000362927 97 ntBASIC1.09□□□□□ -2.23
NFIL3Q16649 RNU6-978P-201ENST00000364371 103 ntBASIC1.09□□□□□ -2.23
NFIL3Q16649 RNU6-654P-201ENST00000364373 107 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 283.7 ms