Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 MIR548A2-201ENST00000384956 97 ntBASIC-1.29□□□□□ -2.62
TPM4P67936 SNORD41.1-201ENST00000391000 69 ntBASIC-1.29□□□□□ -2.62
TPM4P67936 SNORD110-201ENST00000408189 75 ntBASIC-1.29□□□□□ -2.62
TPM4P67936 AC006210.1-201ENST00000424882 111 ntBASIC-1.29□□□□□ -2.62
TPM4P67936 RNU6-693P-201ENST00000516134 107 ntBASIC-1.29□□□□□ -2.62
TPM4P67936 SNORA25.13-201ENST00000516395 103 ntBASIC-1.29□□□□□ -2.62
TPM4P67936 MIR4659A-201ENST00000580269 81 ntBASIC-1.29□□□□□ -2.62
TPM4P67936 AC011373.1-201ENST00000607270 237 ntBASIC-1.29□□□□□ -2.62
TPM4P67936 AC245008.1-201ENST00000608123 476 ntBASIC-1.29□□□□□ -2.62
TPM4P67936 RN7SL660P-201ENST00000614852 299 ntBASIC-1.29□□□□□ -2.62
TPM4P67936 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.29□□□□□ -2.62
TPM4P67936 RNU6-99P-201ENST00000364721 107 ntBASIC-1.3□□□□□ -2.62
TPM4P67936 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.3□□□□□ -2.62
TPM4P67936 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.3□□□□□ -2.62
TPM4P67936 RNA5SP451-201ENST00000410588 110 ntBASIC-1.3□□□□□ -2.62
TPM4P67936 RNU6-373P-201ENST00000411247 98 ntBASIC-1.3□□□□□ -2.62
TPM4P67936 RNU7-104P-201ENST00000459398 79 ntBASIC-1.3□□□□□ -2.62
TPM4P67936 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.3□□□□□ -2.62
TPM4P67936 AC063944.3-201ENST00000609969 533 ntBASIC-1.3□□□□□ -2.62
TPM4P67936 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.31□□□□□ -2.62
TPM4P67936 SNORA72.4-201ENST00000384174 132 ntBASIC-1.31□□□□□ -2.62
TPM4P67936 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.31□□□□□ -2.62
TPM4P67936 MIR516B1-201ENST00000385211 90 ntBASIC-1.31□□□□□ -2.62
TPM4P67936 RNU6-735P-201ENST00000410612 107 ntBASIC-1.31□□□□□ -2.62
TPM4P67936 RNU2-14P-201ENST00000411053 191 ntBASIC-1.31□□□□□ -2.62
TPM4P67936 AL021707.8-201ENST00000609428 183 ntBASIC-1.31□□□□□ -2.62
TPM4P67936 AC024614.3-201ENST00000637860 256 ntBASIC-1.31□□□□□ -2.62
TPM4P67936 SNORD81.1-201ENST00000363064 77 ntBASIC-1.32□□□□□ -2.62
TPM4P67936 SNORD24-201ENST00000383884 75 ntBASIC-1.32□□□□□ -2.62
TPM4P67936 RNU6-259P-201ENST00000383999 107 ntBASIC-1.32□□□□□ -2.62
TPM4P67936 DEFB108C-201ENST00000400154 252 ntBASIC-1.32□□□□□ -2.62
TPM4P67936 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.32□□□□□ -2.62
TPM4P67936 RNU6-1148P-201ENST00000410992 104 ntBASIC-1.32□□□□□ -2.62
TPM4P67936 AC009161.1-201ENST00000417306 376 ntBASIC-1.32□□□□□ -2.62
TPM4P67936 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.32□□□□□ -2.62
TPM4P67936 BX276092.1-201ENST00000427368 251 ntBASIC-1.32□□□□□ -2.62
TPM4P67936 RNU7-45P-201ENST00000459460 63 ntBASIC-1.32□□□□□ -2.62
TPM4P67936 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.32□□□□□ -2.62
TPM4P67936 AC105081.1-201ENST00000617727 106 ntBASIC-1.32□□□□□ -2.62
TPM4P67936 MIR1321-201ENST00000637766 79 ntBASIC-1.32□□□□□ -2.62
TPM4P67936 RNU6-702P-201ENST00000364982 107 ntBASIC-1.33□□□□□ -2.62
TPM4P67936 RNU6-1042P-201ENST00000384204 107 ntBASIC-1.33□□□□□ -2.62
TPM4P67936 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.33□□□□□ -2.62
TPM4P67936 MIR625-201ENST00000385047 85 ntBASIC-1.33□□□□□ -2.62
TPM4P67936 RNU6-1156P-201ENST00000410365 100 ntBASIC-1.33□□□□□ -2.62
TPM4P67936 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-1.33□□□□□ -2.62
TPM4P67936 RNU6-307P-201ENST00000516743 106 ntBASIC-1.33□□□□□ -2.62
TPM4P67936 MIR4662B-201ENST00000579498 81 ntBASIC-1.33□□□□□ -2.62
TPM4P67936 MIR4423-201ENST00000580922 80 ntBASIC-1.33□□□□□ -2.62
TPM4P67936 MIR6779-201ENST00000617283 64 ntBASIC-1.33□□□□□ -2.62
TPM4P67936 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.34□□□□□ -2.62
TPM4P67936 AL160004.2-201ENST00000432935 350 ntBASIC-1.34□□□□□ -2.62
TPM4P67936 RNU6-531P-201ENST00000516694 104 ntBASIC-1.34□□□□□ -2.62
TPM4P67936 MIR302B-201ENST00000362188 73 ntBASIC-1.35□□□□□ -2.63
TPM4P67936 MIR342-201ENST00000362212 99 ntBASIC-1.35□□□□□ -2.63
TPM4P67936 RNU4-58P-201ENST00000363192 141 ntBASIC-1.35□□□□□ -2.63
TPM4P67936 RNA5SP403-201ENST00000363598 108 ntBASIC-1.35□□□□□ -2.63
TPM4P67936 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.35□□□□□ -2.63
TPM4P67936 RNA5SP66-201ENST00000517178 101 ntBASIC-1.35□□□□□ -2.63
TPM4P67936 DEFB131E-201ENST00000532329 154 ntBASIC-1.35□□□□□ -2.63
TPM4P67936 AC006362.1-201ENST00000567392 174 ntBASIC-1.35□□□□□ -2.63
TPM4P67936 MIR4802-201ENST00000581881 80 ntBASIC-1.35□□□□□ -2.63
TPM4P67936 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.36□□□□□ -2.63
TPM4P67936 SNORD61-201ENST00000384252 73 ntBASIC-1.36□□□□□ -2.63
TPM4P67936 RNU6-1119P-201ENST00000384349 108 ntBASIC-1.36□□□□□ -2.63
TPM4P67936 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-1.36□□□□□ -2.63
TPM4P67936 Y_RNA.682-201ENST00000516457 100 ntBASIC-1.36□□□□□ -2.63
TPM4P67936 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-1.36□□□□□ -2.63
TPM4P67936 AL049861.1-201ENST00000603130 150 ntBASIC-1.36□□□□□ -2.63
TPM4P67936 RNU6-888P-201ENST00000363010 101 ntBASIC-1.37□□□□□ -2.63
TPM4P67936 RNU6-801P-201ENST00000364087 105 ntBASIC-1.37□□□□□ -2.63
TPM4P67936 Y_RNA.577-201ENST00000384794 101 ntBASIC-1.37□□□□□ -2.63
TPM4P67936 MTND2P9-201ENST00000422293 931 ntBASIC-1.37□□□□□ -2.63
TPM4P67936 SNORD77.4-201ENST00000516158 81 ntBASIC-1.37□□□□□ -2.63
TPM4P67936 MIR3145-201ENST00000580727 82 ntBASIC-1.37□□□□□ -2.63
TPM4P67936 MIR4493-201ENST00000584016 73 ntBASIC-1.37□□□□□ -2.63
TPM4P67936 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.37□□□□□ -2.63
TPM4P67936 TPTEP1-208ENST00000636884 213 ntBASIC-1.37□□□□□ -2.63
TPM4P67936 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.38□□□□□ -2.63
TPM4P67936 Y_RNA.77-201ENST00000362962 107 ntBASIC-1.38□□□□□ -2.63
TPM4P67936 RNY1P13-201ENST00000365030 105 ntBASIC-1.38□□□□□ -2.63
TPM4P67936 MTND3P10-201ENST00000450967 341 ntBASIC-1.38□□□□□ -2.63
TPM4P67936 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.38□□□□□ -2.63
TPM4P67936 AL356055.1-201ENST00000602528 446 ntBASIC-1.38□□□□□ -2.63
TPM4P67936 AC090582.1-201ENST00000636321 199 ntBASIC-1.38□□□□□ -2.63
TPM4P67936 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.39□□□□□ -2.63
TPM4P67936 RNU6-490P-201ENST00000362985 107 ntBASIC-1.39□□□□□ -2.63
TPM4P67936 RNA5SP98-201ENST00000363158 137 ntBASIC-1.39□□□□□ -2.63
TPM4P67936 RNU6-509P-201ENST00000363519 107 ntBASIC-1.39□□□□□ -2.63
TPM4P67936 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.39□□□□□ -2.63
TPM4P67936 Y_RNA.170-201ENST00000363746 110 ntBASIC-1.4□□□□□ -2.63
TPM4P67936 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.4□□□□□ -2.63
TPM4P67936 RNU6-144P-201ENST00000383951 107 ntBASIC-1.4□□□□□ -2.63
TPM4P67936 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.4□□□□□ -2.63
TPM4P67936 AF228730.3-201ENST00000436691 102 ntBASIC-1.4□□□□□ -2.63
TPM4P67936 RNA5SP484-201ENST00000458857 111 ntBASIC-1.4□□□□□ -2.63
TPM4P67936 AC100767.1-201ENST00000528178 123 ntBASIC-1.4□□□□□ -2.63
TPM4P67936 MIR5589-201ENST00000579442 60 ntBASIC-1.4□□□□□ -2.63
TPM4P67936 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-1.4□□□□□ -2.63
TPM4P67936 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.41□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 263.2 ms