Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 Y_RNA.452-201ENST00000384202 108 ntBASIC1□□□□□ -2.25
UBL4AP11441 SNORA2B-201ENST00000384583 137 ntBASIC1□□□□□ -2.25
UBL4AP11441 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1□□□□□ -2.25
UBL4AP11441 RNU7-73P-201ENST00000458743 63 ntBASIC1□□□□□ -2.25
UBL4AP11441 RPS29P24-201ENST00000486345 171 ntBASIC1□□□□□ -2.25
UBL4AP11441 RNU6-1023P-201ENST00000516137 106 ntBASIC1□□□□□ -2.25
UBL4AP11441 RNU6-561P-201ENST00000516222 102 ntBASIC1□□□□□ -2.25
UBL4AP11441 RNY3P16-201ENST00000516338 101 ntBASIC1□□□□□ -2.25
UBL4AP11441 Y_RNA.7-201ENST00000362352 102 ntBASIC0.99□□□□□ -2.25
UBL4AP11441 SNORA20.1-201ENST00000364790 130 ntBASIC0.99□□□□□ -2.25
UBL4AP11441 MT-TN-201ENST00000387400 73 ntBASIC0.99□□□□□ -2.25
UBL4AP11441 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
UBL4AP11441 RNU4-43P-201ENST00000410628 137 ntBASIC0.99□□□□□ -2.25
UBL4AP11441 POLR2J4-204ENST00000418424 324 ntBASIC0.99□□□□□ -2.25
UBL4AP11441 AL035398.1-201ENST00000430869 322 ntBASIC0.99□□□□□ -2.25
UBL4AP11441 AL121914.1-201ENST00000450188 156 ntBASIC0.99□□□□□ -2.25
UBL4AP11441 RPL39P28-201ENST00000465655 155 ntBASIC0.99□□□□□ -2.25
UBL4AP11441 RNU4-71P-201ENST00000516258 113 ntBASIC0.99□□□□□ -2.25
UBL4AP11441 MIR3149-201ENST00000584629 83 ntBASIC0.99□□□□□ -2.25
UBL4AP11441 MIR4295-201ENST00000585286 85 ntBASIC0.99□□□□□ -2.25
UBL4AP11441 AP000753.3-201ENST00000604083 169 ntBASIC0.99□□□□□ -2.25
UBL4AP11441 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.99□□□□□ -2.25
UBL4AP11441 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.99□□□□□ -2.25
UBL4AP11441 Y_RNA.168-201ENST00000363740 102 ntBASIC0.98□□□□□ -2.25
UBL4AP11441 RNU6-463P-201ENST00000384340 107 ntBASIC0.98□□□□□ -2.25
UBL4AP11441 Y_RNA.626-201ENST00000411288 95 ntBASIC0.98□□□□□ -2.25
UBL4AP11441 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.98□□□□□ -2.25
UBL4AP11441 AC067940.1-201ENST00000458411 300 ntBASIC0.98□□□□□ -2.25
UBL4AP11441 U7.7-201ENST00000459276 60 ntBASIC0.98□□□□□ -2.25
UBL4AP11441 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.98□□□□□ -2.25
UBL4AP11441 RNA5SP255-201ENST00000516370 107 ntBASIC0.98□□□□□ -2.25
UBL4AP11441 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.98□□□□□ -2.25
UBL4AP11441 AL020996.3-201ENST00000606617 222 ntBASIC0.98□□□□□ -2.25
UBL4AP11441 7SK.10-201ENST00000621414 298 ntBASIC0.98□□□□□ -2.25
UBL4AP11441 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
UBL4AP11441 Y_RNA.23-201ENST00000362496 106 ntBASIC0.97□□□□□ -2.25
UBL4AP11441 Y_RNA.121-201ENST00000363309 113 ntBASIC0.97□□□□□ -2.25
UBL4AP11441 RNU1-36P-201ENST00000365130 165 ntBASIC0.97□□□□□ -2.25
UBL4AP11441 Y_RNA.542-201ENST00000384641 111 ntBASIC0.97□□□□□ -2.25
UBL4AP11441 RNU6-578P-201ENST00000390980 103 ntBASIC0.97□□□□□ -2.25
UBL4AP11441 RNU6-493P-201ENST00000391321 108 ntBASIC0.97□□□□□ -2.25
UBL4AP11441 RNU6-994P-201ENST00000410507 111 ntBASIC0.97□□□□□ -2.25
UBL4AP11441 RNU7-96P-201ENST00000459535 64 ntBASIC0.97□□□□□ -2.25
UBL4AP11441 AC087343.1-201ENST00000477341 475 ntBASIC0.97□□□□□ -2.25
UBL4AP11441 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.97□□□□□ -2.25
UBL4AP11441 AL359821.1-201ENST00000605519 182 ntBASIC0.97□□□□□ -2.25
UBL4AP11441 MIR8055-201ENST00000610739 97 ntBASIC0.97□□□□□ -2.25
UBL4AP11441 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
UBL4AP11441 MIR377-201ENST00000362145 69 ntBASIC0.96□□□□□ -2.26
UBL4AP11441 Y_RNA.238-201ENST00000364441 102 ntBASIC0.96□□□□□ -2.26
UBL4AP11441 RNU6-580P-201ENST00000365159 107 ntBASIC0.96□□□□□ -2.26
UBL4AP11441 SNORA1-201ENST00000384107 130 ntBASIC0.96□□□□□ -2.26
UBL4AP11441 Y_RNA.440-201ENST00000384120 114 ntBASIC0.96□□□□□ -2.26
UBL4AP11441 Y_RNA.447-201ENST00000384184 113 ntBASIC0.96□□□□□ -2.26
UBL4AP11441 SNORD38B-201ENST00000384690 67 ntBASIC0.96□□□□□ -2.26
UBL4AP11441 SNORD77.3-201ENST00000391113 65 ntBASIC0.96□□□□□ -2.26
UBL4AP11441 RNA5SP95-201ENST00000410319 137 ntBASIC0.96□□□□□ -2.26
UBL4AP11441 Y_RNA.618-201ENST00000410949 107 ntBASIC0.96□□□□□ -2.26
UBL4AP11441 RPS3AP1-201ENST00000413190 320 ntBASIC0.96□□□□□ -2.26
UBL4AP11441 AC108729.3-201ENST00000513484 108 ntBASIC0.96□□□□□ -2.26
UBL4AP11441 Y_RNA.797-201ENST00000515977 94 ntBASIC0.96□□□□□ -2.26
UBL4AP11441 AC025627.3-201ENST00000582078 182 ntBASIC0.96□□□□□ -2.26
UBL4AP11441 MIR4264-201ENST00000583520 66 ntBASIC0.96□□□□□ -2.26
UBL4AP11441 AL162730.1-201ENST00000605734 292 ntBASIC0.96□□□□□ -2.26
UBL4AP11441 AC108706.1-201ENST00000611053 297 ntBASIC0.96□□□□□ -2.26
UBL4AP11441 AC091895.1-201ENST00000624494 256 ntBASIC0.96□□□□□ -2.26
UBL4AP11441 SNORD38B-202ENST00000625943 69 ntBASIC0.96□□□□□ -2.26
UBL4AP11441 RNU6-923P-201ENST00000364753 107 ntBASIC0.95□□□□□ -2.26
UBL4AP11441 RNU6-125P-201ENST00000384505 107 ntBASIC0.95□□□□□ -2.26
UBL4AP11441 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.95□□□□□ -2.26
UBL4AP11441 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.95□□□□□ -2.26
UBL4AP11441 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.95□□□□□ -2.26
UBL4AP11441 Y_RNA.680-201ENST00000516441 93 ntBASIC0.95□□□□□ -2.26
UBL4AP11441 RNU6-1110P-201ENST00000516462 101 ntBASIC0.95□□□□□ -2.26
UBL4AP11441 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.95□□□□□ -2.26
UBL4AP11441 AC004817.2-201ENST00000561794 651 ntBASIC0.95□□□□□ -2.26
UBL4AP11441 MIR4498-201ENST00000577599 66 ntBASIC0.95□□□□□ -2.26
UBL4AP11441 RNU2-4P-201ENST00000606190 192 ntBASIC0.95□□□□□ -2.26
UBL4AP11441 SNORD114-21-201ENST00000606412 72 ntBASIC0.95□□□□□ -2.26
UBL4AP11441 RNU6-94P-201ENST00000607728 107 ntBASIC0.95□□□□□ -2.26
UBL4AP11441 AL136317.1-201ENST00000612653 226 ntBASIC0.95□□□□□ -2.26
UBL4AP11441 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
UBL4AP11441 Y_RNA.307-201ENST00000365022 117 ntBASIC0.94□□□□□ -2.26
UBL4AP11441 RNU6-53P-201ENST00000365367 106 ntBASIC0.94□□□□□ -2.26
UBL4AP11441 RNU6-1292P-201ENST00000383856 107 ntBASIC0.94□□□□□ -2.26
UBL4AP11441 RNU6-913P-201ENST00000390913 95 ntBASIC0.94□□□□□ -2.26
UBL4AP11441 AL603825.1-201ENST00000438481 80 ntBASIC0.94□□□□□ -2.26
UBL4AP11441 RNU2-11P-201ENST00000459191 187 ntBASIC0.94□□□□□ -2.26
UBL4AP11441 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.94□□□□□ -2.26
UBL4AP11441 AC005840.1-201ENST00000498412 377 ntBASIC0.94□□□□□ -2.26
UBL4AP11441 RNU6-998P-201ENST00000515894 101 ntBASIC0.94□□□□□ -2.26
UBL4AP11441 SNORD116-25-201ENST00000516517 92 ntBASIC0.94□□□□□ -2.26
UBL4AP11441 RNU6-111P-201ENST00000517179 105 ntBASIC0.94□□□□□ -2.26
UBL4AP11441 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
UBL4AP11441 MIR378D2-201ENST00000580636 98 ntBASIC0.94□□□□□ -2.26
UBL4AP11441 MIR3129-201ENST00000581095 76 ntBASIC0.94□□□□□ -2.26
UBL4AP11441 Z97988.1-201ENST00000637697 135 ntBASIC0.94□□□□□ -2.26
UBL4AP11441 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
UBL4AP11441 Y_RNA.60-201ENST00000362831 98 ntBASIC0.93□□□□□ -2.26
UBL4AP11441 Y_RNA.144-201ENST00000363521 113 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms