Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 RNU6-693P-201ENST00000516134 107 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 AC211469.2-201ENST00000605461 205 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 AC011921.3-201ENST00000605540 361 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 SNORD115-40-201ENST00000606510 82 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 RNU6-94P-201ENST00000607728 107 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 AL365265.1-201ENST00000621045 234 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 U6.104-201ENST00000637979 90 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 Y_RNA.37-201ENST00000362606 108 ntBASIC0.84□□□□□ -2.27
CCDC63Q8NA47 Y_RNA.91-201ENST00000363042 107 ntBASIC0.84□□□□□ -2.27
CCDC63Q8NA47 RNU6-653P-201ENST00000363074 106 ntBASIC0.84□□□□□ -2.27
CCDC63Q8NA47 MIR100-201ENST00000385259 80 ntBASIC0.84□□□□□ -2.27
CCDC63Q8NA47 RNU2-38P-201ENST00000410856 79 ntBASIC0.84□□□□□ -2.27
CCDC63Q8NA47 AC006461.1-201ENST00000412637 326 ntBASIC0.84□□□□□ -2.27
CCDC63Q8NA47 RNA5SP458-201ENST00000516188 119 ntBASIC0.84□□□□□ -2.27
CCDC63Q8NA47 Y_RNA.76-201ENST00000362931 109 ntBASIC0.83□□□□□ -2.28
CCDC63Q8NA47 Y_RNA.133-201ENST00000363428 110 ntBASIC0.83□□□□□ -2.28
CCDC63Q8NA47 Y_RNA.149-201ENST00000363558 117 ntBASIC0.83□□□□□ -2.28
CCDC63Q8NA47 Y_RNA.241-201ENST00000364470 117 ntBASIC0.83□□□□□ -2.28
CCDC63Q8NA47 Y_RNA.327-201ENST00000365201 102 ntBASIC0.83□□□□□ -2.28
CCDC63Q8NA47 RNU6-1335P-201ENST00000365426 107 ntBASIC0.83□□□□□ -2.28
CCDC63Q8NA47 Y_RNA.352-201ENST00000365439 102 ntBASIC0.83□□□□□ -2.28
CCDC63Q8NA47 MIR568-201ENST00000385036 95 ntBASIC0.83□□□□□ -2.28
CCDC63Q8NA47 MIR616-201ENST00000385293 97 ntBASIC0.83□□□□□ -2.28
CCDC63Q8NA47 RNU6-381P-201ENST00000391259 108 ntBASIC0.83□□□□□ -2.28
CCDC63Q8NA47 RNU2-55P-201ENST00000411146 174 ntBASIC0.83□□□□□ -2.28
CCDC63Q8NA47 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.83□□□□□ -2.28
CCDC63Q8NA47 AC090844.1-201ENST00000422019 156 ntBASIC0.83□□□□□ -2.28
CCDC63Q8NA47 AC087499.4-201ENST00000448505 178 ntBASIC0.83□□□□□ -2.28
CCDC63Q8NA47 SNRPGP8-201ENST00000454064 226 ntBASIC0.83□□□□□ -2.28
CCDC63Q8NA47 Y_RNA.638-201ENST00000459374 113 ntBASIC0.83□□□□□ -2.28
CCDC63Q8NA47 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
CCDC63Q8NA47 SCARNA15.1-201ENST00000516384 125 ntBASIC0.83□□□□□ -2.28
CCDC63Q8NA47 SNORA18.4-201ENST00000516440 124 ntBASIC0.83□□□□□ -2.28
CCDC63Q8NA47 MIR2115-201ENST00000516657 100 ntBASIC0.83□□□□□ -2.28
CCDC63Q8NA47 SNORD36C-201ENST00000516733 66 ntBASIC0.83□□□□□ -2.28
CCDC63Q8NA47 RNU6-365P-201ENST00000517113 106 ntBASIC0.83□□□□□ -2.28
CCDC63Q8NA47 RNU6-1270P-201ENST00000517128 108 ntBASIC0.83□□□□□ -2.28
CCDC63Q8NA47 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.83□□□□□ -2.28
CCDC63Q8NA47 MIR4653-201ENST00000585107 83 ntBASIC0.83□□□□□ -2.28
CCDC63Q8NA47 AP000942.4-201ENST00000604811 241 ntBASIC0.83□□□□□ -2.28
CCDC63Q8NA47 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.82□□□□□ -2.28
CCDC63Q8NA47 SNORD45.3-201ENST00000363836 72 ntBASIC0.82□□□□□ -2.28
CCDC63Q8NA47 SNORD113.3-201ENST00000364630 78 ntBASIC0.82□□□□□ -2.28
CCDC63Q8NA47 Y_RNA.277-201ENST00000364754 102 ntBASIC0.82□□□□□ -2.28
CCDC63Q8NA47 Y_RNA.634-201ENST00000364811 113 ntBASIC0.82□□□□□ -2.28
CCDC63Q8NA47 Y_RNA.416-201ENST00000384014 113 ntBASIC0.82□□□□□ -2.28
CCDC63Q8NA47 RNY3P5-201ENST00000384127 102 ntBASIC0.82□□□□□ -2.28
CCDC63Q8NA47 RNU6-125P-201ENST00000384505 107 ntBASIC0.82□□□□□ -2.28
CCDC63Q8NA47 SNORD111-201ENST00000408139 94 ntBASIC0.82□□□□□ -2.28
CCDC63Q8NA47 RNU2-64P-201ENST00000411315 191 ntBASIC0.82□□□□□ -2.28
CCDC63Q8NA47 RPS3AP1-201ENST00000413190 320 ntBASIC0.82□□□□□ -2.28
CCDC63Q8NA47 AL035398.1-201ENST00000430869 322 ntBASIC0.82□□□□□ -2.28
CCDC63Q8NA47 FABP5P4-201ENST00000437203 171 ntBASIC0.82□□□□□ -2.28
CCDC63Q8NA47 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.82□□□□□ -2.28
CCDC63Q8NA47 SNORD127-201ENST00000458892 86 ntBASIC0.82□□□□□ -2.28
CCDC63Q8NA47 RNU6-1299P-201ENST00000516316 100 ntBASIC0.82□□□□□ -2.28
CCDC63Q8NA47 Y_RNA.679-201ENST00000516416 91 ntBASIC0.82□□□□□ -2.28
CCDC63Q8NA47 RNU6-197P-201ENST00000516680 100 ntBASIC0.82□□□□□ -2.28
CCDC63Q8NA47 RNU6-126P-201ENST00000516685 103 ntBASIC0.82□□□□□ -2.28
CCDC63Q8NA47 MIR4698-201ENST00000577795 80 ntBASIC0.82□□□□□ -2.28
CCDC63Q8NA47 AC097639.2-201ENST00000603159 172 ntBASIC0.82□□□□□ -2.28
CCDC63Q8NA47 FAM71BP1-201ENST00000604431 523 ntBASIC0.82□□□□□ -2.28
CCDC63Q8NA47 snoU13.31-201ENST00000607291 104 ntBASIC0.82□□□□□ -2.28
CCDC63Q8NA47 RNU6-396P-201ENST00000365369 105 ntBASIC0.81□□□□□ -2.28
CCDC63Q8NA47 Y_RNA.562-201ENST00000384695 113 ntBASIC0.81□□□□□ -2.28
CCDC63Q8NA47 MIR532-201ENST00000385025 91 ntBASIC0.81□□□□□ -2.28
CCDC63Q8NA47 SNORA40.5-201ENST00000391061 128 ntBASIC0.81□□□□□ -2.28
CCDC63Q8NA47 AL606845.1-201ENST00000404881 255 ntBASIC0.81□□□□□ -2.28
CCDC63Q8NA47 Y_RNA.622-201ENST00000411091 108 ntBASIC0.81□□□□□ -2.28
CCDC63Q8NA47 MTND2P23-201ENST00000422990 651 ntBASIC0.81□□□□□ -2.28
CCDC63Q8NA47 MTCYBP9-201ENST00000431021 303 ntBASIC0.81□□□□□ -2.28
CCDC63Q8NA47 AF228730.3-201ENST00000436691 102 ntBASIC0.81□□□□□ -2.28
CCDC63Q8NA47 RNU6-327P-201ENST00000516270 127 ntBASIC0.81□□□□□ -2.28
CCDC63Q8NA47 RNU6-504P-201ENST00000516568 104 ntBASIC0.81□□□□□ -2.28
CCDC63Q8NA47 AP003484.1-201ENST00000530974 250 ntBASIC0.81□□□□□ -2.28
CCDC63Q8NA47 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.81□□□□□ -2.28
CCDC63Q8NA47 MIR6857-201ENST00000613267 93 ntBASIC0.81□□□□□ -2.28
CCDC63Q8NA47 HSBP1P2-201ENST00000299671 229 ntBASIC0.8□□□□□ -2.28
CCDC63Q8NA47 Y_RNA.168-201ENST00000363740 102 ntBASIC0.8□□□□□ -2.28
CCDC63Q8NA47 Y_RNA.432-201ENST00000384087 111 ntBASIC0.8□□□□□ -2.28
CCDC63Q8NA47 SNORA2B-201ENST00000384583 137 ntBASIC0.8□□□□□ -2.28
CCDC63Q8NA47 MIR608-201ENST00000384820 100 ntBASIC0.8□□□□□ -2.28
CCDC63Q8NA47 MIR605-201ENST00000385078 83 ntBASIC0.8□□□□□ -2.28
CCDC63Q8NA47 MT-TN-201ENST00000387400 73 ntBASIC0.8□□□□□ -2.28
CCDC63Q8NA47 RNU6-913P-201ENST00000390913 95 ntBASIC0.8□□□□□ -2.28
CCDC63Q8NA47 AL606490.4-201ENST00000423117 127 ntBASIC0.8□□□□□ -2.28
CCDC63Q8NA47 snoU13.16-201ENST00000459350 104 ntBASIC0.8□□□□□ -2.28
CCDC63Q8NA47 PSMC1P5-201ENST00000512850 177 ntBASIC0.8□□□□□ -2.28
CCDC63Q8NA47 RNU6-561P-201ENST00000516222 102 ntBASIC0.8□□□□□ -2.28
CCDC63Q8NA47 RNA5SP153-201ENST00000516498 76 ntBASIC0.8□□□□□ -2.28
CCDC63Q8NA47 AL442067.1-201ENST00000613261 223 ntBASIC0.8□□□□□ -2.28
CCDC63Q8NA47 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.8□□□□□ -2.28
CCDC63Q8NA47 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
CCDC63Q8NA47 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
CCDC63Q8NA47 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
CCDC63Q8NA47 MIR377-201ENST00000362145 69 ntBASIC0.79□□□□□ -2.28
CCDC63Q8NA47 RNU6-580P-201ENST00000365159 107 ntBASIC0.79□□□□□ -2.28
CCDC63Q8NA47 RNU6-53P-201ENST00000365367 106 ntBASIC0.79□□□□□ -2.28
CCDC63Q8NA47 RNU6-1228P-201ENST00000391014 107 ntBASIC0.79□□□□□ -2.28
CCDC63Q8NA47 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 583 ms