Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 SNORD116-17-201ENST00000383929 92 ntBASIC1.86□□□□□ -2.11
RHOP08100 SNORD116-15-201ENST00000384445 92 ntBASIC1.86□□□□□ -2.11
RHOP08100 SNORD116-19-201ENST00000384729 92 ntBASIC1.86□□□□□ -2.11
RHOP08100 MIR660-201ENST00000385235 97 ntBASIC1.86□□□□□ -2.11
RHOP08100 MIR676-201ENST00000390702 67 ntBASIC1.86□□□□□ -2.11
RHOP08100 RNU6-1168P-201ENST00000390831 104 ntBASIC1.86□□□□□ -2.11
RHOP08100 RNU6-360P-201ENST00000390944 104 ntBASIC1.86□□□□□ -2.11
RHOP08100 RNU2-40P-201ENST00000410833 196 ntBASIC1.86□□□□□ -2.11
RHOP08100 HMGN2P19-201ENST00000425149 265 ntBASIC1.86□□□□□ -2.11
RHOP08100 RNA5SP236-201ENST00000516169 116 ntBASIC1.86□□□□□ -2.11
RHOP08100 Y_RNA.686-201ENST00000516548 134 ntBASIC1.86□□□□□ -2.11
RHOP08100 RNA5SP364-201ENST00000516938 78 ntBASIC1.86□□□□□ -2.11
RHOP08100 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
RHOP08100 MIR424-201ENST00000362227 98 ntBASIC1.85□□□□□ -2.11
RHOP08100 Y_RNA.37-201ENST00000362606 108 ntBASIC1.85□□□□□ -2.11
RHOP08100 Y_RNA.127-201ENST00000363386 109 ntBASIC1.85□□□□□ -2.11
RHOP08100 RNU6-80P-201ENST00000384195 107 ntBASIC1.85□□□□□ -2.11
RHOP08100 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.85□□□□□ -2.11
RHOP08100 MTATP6P21-201ENST00000440681 189 ntBASIC1.85□□□□□ -2.11
RHOP08100 PGBD4P5-201ENST00000445958 426 ntBASIC1.85□□□□□ -2.11
RHOP08100 AC087499.4-201ENST00000448505 178 ntBASIC1.85□□□□□ -2.11
RHOP08100 RNU4-57P-201ENST00000515980 135 ntBASIC1.85□□□□□ -2.11
RHOP08100 Y_RNA.692-201ENST00000516627 105 ntBASIC1.85□□□□□ -2.11
RHOP08100 SCARNA15-202ENST00000516881 127 ntBASIC1.85□□□□□ -2.11
RHOP08100 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.85□□□□□ -2.11
RHOP08100 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.85□□□□□ -2.11
RHOP08100 Y_RNA.757-201ENST00000578934 114 ntBASIC1.85□□□□□ -2.11
RHOP08100 MIR548AI-201ENST00000579940 88 ntBASIC1.85□□□□□ -2.11
RHOP08100 snoU13.31-201ENST00000607291 104 ntBASIC1.85□□□□□ -2.11
RHOP08100 MIR376A2-201ENST00000636782 80 ntBASIC1.85□□□□□ -2.11
RHOP08100 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
RHOP08100 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
RHOP08100 RNU6-661P-201ENST00000362409 107 ntBASIC1.84□□□□□ -2.11
RHOP08100 Y_RNA.71-201ENST00000362892 104 ntBASIC1.84□□□□□ -2.11
RHOP08100 SNORA16.1-201ENST00000364597 132 ntBASIC1.84□□□□□ -2.11
RHOP08100 MIR452-201ENST00000385020 85 ntBASIC1.84□□□□□ -2.11
RHOP08100 RNU6-938P-201ENST00000411285 103 ntBASIC1.84□□□□□ -2.11
RHOP08100 BTF3P4-201ENST00000418852 495 ntBASIC1.84□□□□□ -2.11
RHOP08100 AC015922.2-201ENST00000435593 184 ntBASIC1.84□□□□□ -2.11
RHOP08100 RNU6-1211P-201ENST00000459179 105 ntBASIC1.84□□□□□ -2.11
RHOP08100 RNU7-12P-201ENST00000516030 62 ntBASIC1.84□□□□□ -2.11
RHOP08100 RNU6-313P-201ENST00000516317 112 ntBASIC1.84□□□□□ -2.11
RHOP08100 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.84□□□□□ -2.11
RHOP08100 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.84□□□□□ -2.11
RHOP08100 MIR502-201ENST00000606349 86 ntBASIC1.84□□□□□ -2.11
RHOP08100 AL365222.1-201ENST00000614661 98 ntBASIC1.84□□□□□ -2.11
RHOP08100 AC015726.2-201ENST00000620112 122 ntBASIC1.84□□□□□ -2.11
RHOP08100 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.84□□□□□ -2.12
RHOP08100 SNORD18B-201ENST00000365659 72 ntBASIC1.83□□□□□ -2.12
RHOP08100 RNU6-1189P-201ENST00000383958 107 ntBASIC1.83□□□□□ -2.12
RHOP08100 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.83□□□□□ -2.12
RHOP08100 Y_RNA.690-201ENST00000516603 95 ntBASIC1.83□□□□□ -2.12
RHOP08100 RNU6-1149P-201ENST00000516810 97 ntBASIC1.83□□□□□ -2.12
RHOP08100 AC022254.1-201ENST00000567857 235 ntBASIC1.83□□□□□ -2.12
RHOP08100 MIR4255-201ENST00000579351 72 ntBASIC1.83□□□□□ -2.12
RHOP08100 MIR3121-201ENST00000579680 77 ntBASIC1.83□□□□□ -2.12
RHOP08100 MIR4713-201ENST00000582691 75 ntBASIC1.83□□□□□ -2.12
RHOP08100 MTND5P32-201ENST00000560711 1802 ntBASIC1.82□□□□□ -2.12
RHOP08100 RNU6-1123P-201ENST00000362347 106 ntBASIC1.82□□□□□ -2.12
RHOP08100 RNU6-1154P-201ENST00000391001 104 ntBASIC1.82□□□□□ -2.12
RHOP08100 RNU4-62P-201ENST00000410125 130 ntBASIC1.82□□□□□ -2.12
RHOP08100 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
RHOP08100 RNA5SP205-201ENST00000364653 136 ntBASIC1.81□□□□□ -2.12
RHOP08100 Y_RNA.440-201ENST00000384120 114 ntBASIC1.81□□□□□ -2.12
RHOP08100 SNORA22C-201ENST00000384614 134 ntBASIC1.81□□□□□ -2.12
RHOP08100 MIR194-1-201ENST00000384892 85 ntBASIC1.81□□□□□ -2.12
RHOP08100 SNORA67.5-201ENST00000391036 107 ntBASIC1.81□□□□□ -2.12
RHOP08100 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.81□□□□□ -2.12
RHOP08100 Y_RNA.651-201ENST00000459380 103 ntBASIC1.81□□□□□ -2.12
RHOP08100 RNU6-1333P-201ENST00000516162 93 ntBASIC1.81□□□□□ -2.12
RHOP08100 SNORD36C-201ENST00000516733 66 ntBASIC1.81□□□□□ -2.12
RHOP08100 AP003484.1-201ENST00000530974 250 ntBASIC1.81□□□□□ -2.12
RHOP08100 MIR4303-201ENST00000581299 66 ntBASIC1.81□□□□□ -2.12
RHOP08100 SNORD3E-202ENST00000627253 216 ntBASIC1.81□□□□□ -2.12
RHOP08100 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RHOP08100 AL161935.2-201ENST00000414627 60 ntBASIC1.8□□□□□ -2.12
RHOP08100 AL158147.1-201ENST00000443970 75 ntBASIC1.8□□□□□ -2.12
RHOP08100 RN7SKP179-201ENST00000516126 217 ntBASIC1.8□□□□□ -2.12
RHOP08100 RNU6-659P-201ENST00000516454 104 ntBASIC1.8□□□□□ -2.12
RHOP08100 RNU6-113P-201ENST00000516653 101 ntBASIC1.8□□□□□ -2.12
RHOP08100 RNU6-1234P-201ENST00000516877 103 ntBASIC1.8□□□□□ -2.12
RHOP08100 AC090049.2-201ENST00000550377 109 ntBASIC1.8□□□□□ -2.12
RHOP08100 MIR3935-201ENST00000583472 104 ntBASIC1.8□□□□□ -2.12
RHOP08100 MIR4781-201ENST00000585250 76 ntBASIC1.8□□□□□ -2.12
RHOP08100 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
RHOP08100 Y_RNA.114-201ENST00000363265 113 ntBASIC1.79□□□□□ -2.12
RHOP08100 RNU6-309P-201ENST00000364573 106 ntBASIC1.79□□□□□ -2.12
RHOP08100 Y_RNA.563-201ENST00000384707 108 ntBASIC1.79□□□□□ -2.12
RHOP08100 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
RHOP08100 RNA5SP489-201ENST00000410986 109 ntBASIC1.79□□□□□ -2.12
RHOP08100 AP1B1P2-201ENST00000416196 106 ntBASIC1.79□□□□□ -2.12
RHOP08100 Y_RNA.712-201ENST00000517011 92 ntBASIC1.79□□□□□ -2.12
RHOP08100 AL022345.2-201ENST00000606307 135 ntBASIC1.79□□□□□ -2.12
RHOP08100 ICE2P2-201ENST00000483823 2787 ntBASIC1.79□□□□□ -2.12
RHOP08100 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
RHOP08100 SNORD115-34-201ENST00000362441 82 ntBASIC1.78□□□□□ -2.12
RHOP08100 SNORD115-12-201ENST00000362583 82 ntBASIC1.78□□□□□ -2.12
RHOP08100 SNORD115-29-201ENST00000362834 82 ntBASIC1.78□□□□□ -2.12
RHOP08100 SNORD115-9-201ENST00000362912 82 ntBASIC1.78□□□□□ -2.12
RHOP08100 SNORD115-21-201ENST00000362963 81 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 226.4 ms