Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 MIR653-201ENST00000385279 96 ntBASIC1.01□□□□□ -2.25
HDAC3O15379 SEPT7P4-201ENST00000437076 306 ntBASIC1.01□□□□□ -2.25
HDAC3O15379 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.01□□□□□ -2.25
HDAC3O15379 RNU7-25P-201ENST00000516544 62 ntBASIC1.01□□□□□ -2.25
HDAC3O15379 RNU6-165P-201ENST00000517170 99 ntBASIC1.01□□□□□ -2.25
HDAC3O15379 AC087685.1-201ENST00000587507 141 ntBASIC1.01□□□□□ -2.25
HDAC3O15379 AC072026.1-201ENST00000605023 201 ntBASIC1.01□□□□□ -2.25
HDAC3O15379 SNORD114-21-201ENST00000606412 72 ntBASIC1.01□□□□□ -2.25
HDAC3O15379 MIR6078-201ENST00000611069 100 ntBASIC1.01□□□□□ -2.25
HDAC3O15379 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.01□□□□□ -2.25
HDAC3O15379 FTX_2.1-201ENST00000618816 94 ntBASIC1.01□□□□□ -2.25
HDAC3O15379 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
HDAC3O15379 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
HDAC3O15379 Y_RNA.240-201ENST00000364469 95 ntBASIC1□□□□□ -2.25
HDAC3O15379 Y_RNA.336-201ENST00000365307 109 ntBASIC1□□□□□ -2.25
HDAC3O15379 RNU6-728P-201ENST00000365375 104 ntBASIC1□□□□□ -2.25
HDAC3O15379 RNU6-1336P-201ENST00000383886 109 ntBASIC1□□□□□ -2.25
HDAC3O15379 RNU6-442P-201ENST00000383968 104 ntBASIC1□□□□□ -2.25
HDAC3O15379 Y_RNA.432-201ENST00000384087 111 ntBASIC1□□□□□ -2.25
HDAC3O15379 RNY3P5-201ENST00000384127 102 ntBASIC1□□□□□ -2.25
HDAC3O15379 SNORD61-201ENST00000384252 73 ntBASIC1□□□□□ -2.25
HDAC3O15379 RNU6-1065P-201ENST00000384513 106 ntBASIC1□□□□□ -2.25
HDAC3O15379 AC023449.1-201ENST00000454464 154 ntBASIC1□□□□□ -2.25
HDAC3O15379 RNU6-1299P-201ENST00000516316 100 ntBASIC1□□□□□ -2.25
HDAC3O15379 Y_RNA.714-201ENST00000517065 90 ntBASIC1□□□□□ -2.25
HDAC3O15379 RNU6-1270P-201ENST00000517128 108 ntBASIC1□□□□□ -2.25
HDAC3O15379 MRPS18CP4-201ENST00000535821 231 ntBASIC1□□□□□ -2.25
HDAC3O15379 MIR3937-201ENST00000580135 106 ntBASIC1□□□□□ -2.25
HDAC3O15379 AC006441.5-201ENST00000612680 209 ntBASIC1□□□□□ -2.25
HDAC3O15379 RNU6-53P-201ENST00000365367 106 ntBASIC0.99□□□□□ -2.25
HDAC3O15379 RNU6-886P-201ENST00000384319 105 ntBASIC0.99□□□□□ -2.25
HDAC3O15379 Y_RNA.547-201ENST00000384654 119 ntBASIC0.99□□□□□ -2.25
HDAC3O15379 MIR518F-201ENST00000384973 87 ntBASIC0.99□□□□□ -2.25
HDAC3O15379 MIR802-201ENST00000390235 94 ntBASIC0.99□□□□□ -2.25
HDAC3O15379 MIR548O-201ENST00000408583 114 ntBASIC0.99□□□□□ -2.25
HDAC3O15379 RNU4-43P-201ENST00000410628 137 ntBASIC0.99□□□□□ -2.25
HDAC3O15379 HMGN2P32-201ENST00000444648 269 ntBASIC0.99□□□□□ -2.25
HDAC3O15379 RPS23P4-201ENST00000487908 423 ntBASIC0.99□□□□□ -2.25
HDAC3O15379 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.99□□□□□ -2.25
HDAC3O15379 RNU6-197P-201ENST00000516680 100 ntBASIC0.99□□□□□ -2.25
HDAC3O15379 RNU6-182P-201ENST00000516970 105 ntBASIC0.99□□□□□ -2.25
HDAC3O15379 RNA5SP404-201ENST00000517118 132 ntBASIC0.99□□□□□ -2.25
HDAC3O15379 AL512310.8-201ENST00000550183 120 ntBASIC0.99□□□□□ -2.25
HDAC3O15379 FAM106DP-201ENST00000586416 501 ntBASIC0.99□□□□□ -2.25
HDAC3O15379 AC097639.2-201ENST00000603159 172 ntBASIC0.99□□□□□ -2.25
HDAC3O15379 AC015726.2-201ENST00000620112 122 ntBASIC0.99□□□□□ -2.25
HDAC3O15379 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
HDAC3O15379 RNU6-978P-201ENST00000364371 103 ntBASIC0.98□□□□□ -2.25
HDAC3O15379 RNU6-818P-201ENST00000364837 108 ntBASIC0.98□□□□□ -2.25
HDAC3O15379 RNU6-643P-201ENST00000384018 107 ntBASIC0.98□□□□□ -2.25
HDAC3O15379 SNORA1-201ENST00000384107 130 ntBASIC0.98□□□□□ -2.25
HDAC3O15379 MIR452-201ENST00000385020 85 ntBASIC0.98□□□□□ -2.25
HDAC3O15379 RNU2-70P-201ENST00000410718 179 ntBASIC0.98□□□□□ -2.25
HDAC3O15379 RNU2-55P-201ENST00000411146 174 ntBASIC0.98□□□□□ -2.25
HDAC3O15379 AC006461.1-201ENST00000412637 326 ntBASIC0.98□□□□□ -2.25
HDAC3O15379 SNX2P2-201ENST00000424553 323 ntBASIC0.98□□□□□ -2.25
HDAC3O15379 snoU13.25-201ENST00000458945 104 ntBASIC0.98□□□□□ -2.25
HDAC3O15379 RPL39P28-201ENST00000465655 155 ntBASIC0.98□□□□□ -2.25
HDAC3O15379 RNU4-57P-201ENST00000515980 135 ntBASIC0.98□□□□□ -2.25
HDAC3O15379 AC090049.2-201ENST00000550377 109 ntBASIC0.98□□□□□ -2.25
HDAC3O15379 MIR4295-201ENST00000585286 85 ntBASIC0.98□□□□□ -2.25
HDAC3O15379 AC091895.1-201ENST00000624494 256 ntBASIC0.98□□□□□ -2.25
HDAC3O15379 MIR376A2-201ENST00000636782 80 ntBASIC0.98□□□□□ -2.25
HDAC3O15379 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.98□□□□□ -2.25
HDAC3O15379 Y_RNA.4-201ENST00000362333 112 ntBASIC0.97□□□□□ -2.25
HDAC3O15379 Y_RNA.164-201ENST00000363709 102 ntBASIC0.97□□□□□ -2.25
HDAC3O15379 RNY1P11-201ENST00000363759 113 ntBASIC0.97□□□□□ -2.25
HDAC3O15379 RNU6-392P-201ENST00000364926 101 ntBASIC0.97□□□□□ -2.25
HDAC3O15379 SNORA2.2-201ENST00000365473 135 ntBASIC0.97□□□□□ -2.25
HDAC3O15379 Y_RNA.494-201ENST00000384432 111 ntBASIC0.97□□□□□ -2.25
HDAC3O15379 SNORD28B-201ENST00000390993 75 ntBASIC0.97□□□□□ -2.25
HDAC3O15379 RNU6-1135P-201ENST00000411083 103 ntBASIC0.97□□□□□ -2.25
HDAC3O15379 RNU6-938P-201ENST00000411285 103 ntBASIC0.97□□□□□ -2.25
HDAC3O15379 Y_RNA.662-201ENST00000516028 97 ntBASIC0.97□□□□□ -2.25
HDAC3O15379 RNU6-693P-201ENST00000516134 107 ntBASIC0.97□□□□□ -2.25
HDAC3O15379 RNA5SP153-201ENST00000516498 76 ntBASIC0.97□□□□□ -2.25
HDAC3O15379 RNU7-181P-201ENST00000517234 74 ntBASIC0.97□□□□□ -2.25
HDAC3O15379 CYP3A52P-201ENST00000563326 91 ntBASIC0.97□□□□□ -2.25
HDAC3O15379 MIR3664-201ENST00000579074 99 ntBASIC0.97□□□□□ -2.25
HDAC3O15379 MIR4662B-201ENST00000579498 81 ntBASIC0.97□□□□□ -2.25
HDAC3O15379 MIR4431-201ENST00000579990 94 ntBASIC0.97□□□□□ -2.25
HDAC3O15379 MIR4781-201ENST00000585250 76 ntBASIC0.97□□□□□ -2.25
HDAC3O15379 AC098479.1-201ENST00000609225 154 ntBASIC0.97□□□□□ -2.25
HDAC3O15379 AC104465.1-201ENST00000611365 139 ntBASIC0.97□□□□□ -2.25
HDAC3O15379 MIR8065-201ENST00000620577 100 ntBASIC0.97□□□□□ -2.25
HDAC3O15379 MIR3658-201ENST00000636291 56 ntBASIC0.97□□□□□ -2.25
HDAC3O15379 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
HDAC3O15379 RNU6-888P-201ENST00000363010 101 ntBASIC0.96□□□□□ -2.26
HDAC3O15379 RNU4-38P-201ENST00000364472 129 ntBASIC0.96□□□□□ -2.26
HDAC3O15379 RNU6-312P-201ENST00000364629 107 ntBASIC0.96□□□□□ -2.26
HDAC3O15379 RNU6-1130P-201ENST00000365434 107 ntBASIC0.96□□□□□ -2.26
HDAC3O15379 Y_RNA.441-201ENST00000384123 112 ntBASIC0.96□□□□□ -2.26
HDAC3O15379 RNU6-804P-201ENST00000384286 107 ntBASIC0.96□□□□□ -2.26
HDAC3O15379 RNU6-768P-201ENST00000384683 107 ntBASIC0.96□□□□□ -2.26
HDAC3O15379 MIR570-201ENST00000384917 97 ntBASIC0.96□□□□□ -2.26
HDAC3O15379 MIR136-201ENST00000385207 82 ntBASIC0.96□□□□□ -2.26
HDAC3O15379 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
HDAC3O15379 MIR548I3-201ENST00000408378 149 ntBASIC0.96□□□□□ -2.26
HDAC3O15379 MIR548I1-201ENST00000408810 149 ntBASIC0.96□□□□□ -2.26
HDAC3O15379 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 231.9 ms