Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 RPS29P29-201ENST00000456396 171 ntBASIC3.04□□□□□ -1.92
PCDHB11Q9Y5F2 Y_RNA.685-201ENST00000516532 108 ntBASIC3.04□□□□□ -1.92
PCDHB11Q9Y5F2 MIR622-201ENST00000638396 96 ntBASIC3.04□□□□□ -1.92
PCDHB11Q9Y5F2 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHB11Q9Y5F2 Y_RNA.17-201ENST00000362433 111 ntBASIC3.03□□□□□ -1.92
PCDHB11Q9Y5F2 Y_RNA.219-201ENST00000364232 113 ntBASIC3.03□□□□□ -1.92
PCDHB11Q9Y5F2 Y_RNA.377-201ENST00000365644 108 ntBASIC3.03□□□□□ -1.92
PCDHB11Q9Y5F2 SNORA7.4-201ENST00000384249 137 ntBASIC3.03□□□□□ -1.92
PCDHB11Q9Y5F2 Y_RNA.470-201ENST00000384307 117 ntBASIC3.03□□□□□ -1.92
PCDHB11Q9Y5F2 SNORD15B-201ENST00000384714 146 ntBASIC3.03□□□□□ -1.92
PCDHB11Q9Y5F2 SNORA26.6-201ENST00000391256 115 ntBASIC3.03□□□□□ -1.92
PCDHB11Q9Y5F2 MIR1283-2-201ENST00000408621 87 ntBASIC3.03□□□□□ -1.92
PCDHB11Q9Y5F2 SNORA7.5-201ENST00000410672 110 ntBASIC3.03□□□□□ -1.92
PCDHB11Q9Y5F2 RNU2-13P-201ENST00000515909 113 ntBASIC3.03□□□□□ -1.92
PCDHB11Q9Y5F2 RNU6-958P-201ENST00000516995 106 ntBASIC3.03□□□□□ -1.92
PCDHB11Q9Y5F2 U7.3-201ENST00000616123 62 ntBASIC3.03□□□□□ -1.92
PCDHB11Q9Y5F2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.03□□□□□ -1.92
PCDHB11Q9Y5F2 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.03□□□□□ -1.92
PCDHB11Q9Y5F2 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PCDHB11Q9Y5F2 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
PCDHB11Q9Y5F2 RNU6-616P-201ENST00000384353 107 ntBASIC3.02□□□□□ -1.93
PCDHB11Q9Y5F2 SNORA18-201ENST00000384416 132 ntBASIC3.02□□□□□ -1.93
PCDHB11Q9Y5F2 RNU7-26P-201ENST00000458980 63 ntBASIC3.02□□□□□ -1.93
PCDHB11Q9Y5F2 RNU7-67P-201ENST00000459003 62 ntBASIC3.02□□□□□ -1.93
PCDHB11Q9Y5F2 AC092185.1-201ENST00000491371 97 ntBASIC3.02□□□□□ -1.93
PCDHB11Q9Y5F2 RPL23AP63-201ENST00000498752 471 ntBASIC3.02□□□□□ -1.93
PCDHB11Q9Y5F2 SCARNA16.3-201ENST00000516595 184 ntBASIC3.02□□□□□ -1.93
PCDHB11Q9Y5F2 RNA5SP33-201ENST00000516687 98 ntBASIC3.02□□□□□ -1.93
PCDHB11Q9Y5F2 DNAJC19P9-201ENST00000555084 351 ntBASIC3.02□□□□□ -1.93
PCDHB11Q9Y5F2 MIR548AE2-201ENST00000583456 67 ntBASIC3.02□□□□□ -1.93
PCDHB11Q9Y5F2 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
PCDHB11Q9Y5F2 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PCDHB11Q9Y5F2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.02□□□□□ -1.93
PCDHB11Q9Y5F2 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.01□□□□□ -1.93
PCDHB11Q9Y5F2 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.01□□□□□ -1.93
PCDHB11Q9Y5F2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
PCDHB11Q9Y5F2 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PCDHB11Q9Y5F2 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
PCDHB11Q9Y5F2 Y_RNA.430-201ENST00000384081 110 ntBASIC3.01□□□□□ -1.93
PCDHB11Q9Y5F2 SNORA46-201ENST00000384762 135 ntBASIC3.01□□□□□ -1.93
PCDHB11Q9Y5F2 AC008885.1-201ENST00000514930 301 ntBASIC3.01□□□□□ -1.93
PCDHB11Q9Y5F2 RNU6-1018P-201ENST00000516577 106 ntBASIC3.01□□□□□ -1.93
PCDHB11Q9Y5F2 RNA5SP380-201ENST00000517190 98 ntBASIC3.01□□□□□ -1.93
PCDHB11Q9Y5F2 UBL5P2-201ENST00000583788 219 ntBASIC3.01□□□□□ -1.93
PCDHB11Q9Y5F2 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.01□□□□□ -1.93
PCDHB11Q9Y5F2 AC006023.1-201ENST00000603944 259 ntBASIC3.01□□□□□ -1.93
PCDHB11Q9Y5F2 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PCDHB11Q9Y5F2 Y_RNA.96-201ENST00000363092 109 ntBASIC3□□□□□ -1.93
PCDHB11Q9Y5F2 SNORD45B-201ENST00000364617 72 ntBASIC3□□□□□ -1.93
PCDHB11Q9Y5F2 RNU6-60P-201ENST00000364792 103 ntBASIC3□□□□□ -1.93
PCDHB11Q9Y5F2 MIR520A-201ENST00000384862 85 ntBASIC3□□□□□ -1.93
PCDHB11Q9Y5F2 RNA5SP465-201ENST00000391195 109 ntBASIC3□□□□□ -1.93
PCDHB11Q9Y5F2 RNU7-73P-201ENST00000458743 63 ntBASIC3□□□□□ -1.93
PCDHB11Q9Y5F2 MIR1270-201ENST00000459320 83 ntBASIC3□□□□□ -1.93
PCDHB11Q9Y5F2 RNVU1-2-201ENST00000516326 135 ntBASIC3□□□□□ -1.93
PCDHB11Q9Y5F2 MIR548Z-201ENST00000584743 97 ntBASIC3□□□□□ -1.93
PCDHB11Q9Y5F2 RPL12P50-201ENST00000603116 116 ntBASIC3□□□□□ -1.93
PCDHB11Q9Y5F2 MIR6717-201ENST00000622747 73 ntBASIC3□□□□□ -1.93
PCDHB11Q9Y5F2 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3□□□□□ -1.93
PCDHB11Q9Y5F2 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PCDHB11Q9Y5F2 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PCDHB11Q9Y5F2 RNU1-109P-201ENST00000383960 147 ntBASIC2.99□□□□□ -1.93
PCDHB11Q9Y5F2 RNU6-1201P-201ENST00000384227 107 ntBASIC2.99□□□□□ -1.93
PCDHB11Q9Y5F2 MRPL35P3-201ENST00000421557 364 ntBASIC2.99□□□□□ -1.93
PCDHB11Q9Y5F2 HMGN2P3-201ENST00000433603 273 ntBASIC2.99□□□□□ -1.93
PCDHB11Q9Y5F2 HMGN2P5-201ENST00000436882 273 ntBASIC2.99□□□□□ -1.93
PCDHB11Q9Y5F2 UQCRHP3-201ENST00000451503 251 ntBASIC2.99□□□□□ -1.93
PCDHB11Q9Y5F2 AC093850.1-201ENST00000454121 251 ntBASIC2.99□□□□□ -1.93
PCDHB11Q9Y5F2 AC022254.1-201ENST00000567857 235 ntBASIC2.99□□□□□ -1.93
PCDHB11Q9Y5F2 MIR4777-201ENST00000583710 86 ntBASIC2.99□□□□□ -1.93
PCDHB11Q9Y5F2 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.99□□□□□ -1.93
PCDHB11Q9Y5F2 AL513423.1-201ENST00000621695 132 ntBASIC2.99□□□□□ -1.93
PCDHB11Q9Y5F2 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PCDHB11Q9Y5F2 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
PCDHB11Q9Y5F2 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
PCDHB11Q9Y5F2 SNORD78.1-201ENST00000390866 65 ntBASIC2.98□□□□□ -1.93
PCDHB11Q9Y5F2 SNORA48.1-201ENST00000390879 135 ntBASIC2.98□□□□□ -1.93
PCDHB11Q9Y5F2 RNU6-1190P-201ENST00000410811 104 ntBASIC2.98□□□□□ -1.93
PCDHB11Q9Y5F2 RNU7-34P-201ENST00000459394 64 ntBASIC2.98□□□□□ -1.93
PCDHB11Q9Y5F2 RN7SL75P-201ENST00000461926 281 ntBASIC2.98□□□□□ -1.93
PCDHB11Q9Y5F2 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.98□□□□□ -1.93
PCDHB11Q9Y5F2 RNU6-162P-201ENST00000516228 103 ntBASIC2.98□□□□□ -1.93
PCDHB11Q9Y5F2 RNA5SP437-201ENST00000517249 129 ntBASIC2.98□□□□□ -1.93
PCDHB11Q9Y5F2 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.98□□□□□ -1.93
PCDHB11Q9Y5F2 AL020996.3-201ENST00000606617 222 ntBASIC2.98□□□□□ -1.93
PCDHB11Q9Y5F2 MIR4791-201ENST00000607666 84 ntBASIC2.98□□□□□ -1.93
PCDHB11Q9Y5F2 AC021506.2-201ENST00000612354 169 ntBASIC2.98□□□□□ -1.93
PCDHB11Q9Y5F2 AC091304.10-201ENST00000641554 121 ntBASIC2.98□□□□□ -1.93
PCDHB11Q9Y5F2 AC093831.2-201ENST00000624393 3427 ntBASIC2.98□□□□□ -1.93
PCDHB11Q9Y5F2 Y_RNA.95-201ENST00000363079 95 ntBASIC2.97□□□□□ -1.93
PCDHB11Q9Y5F2 MIR518A2-201ENST00000384966 87 ntBASIC2.97□□□□□ -1.93
PCDHB11Q9Y5F2 RNU6-913P-201ENST00000390913 95 ntBASIC2.97□□□□□ -1.93
PCDHB11Q9Y5F2 SNORD28B-201ENST00000390993 75 ntBASIC2.97□□□□□ -1.93
PCDHB11Q9Y5F2 AL451046.2-201ENST00000403074 277 ntBASIC2.97□□□□□ -1.93
PCDHB11Q9Y5F2 RNU2-7P-201ENST00000410794 178 ntBASIC2.97□□□□□ -1.93
PCDHB11Q9Y5F2 UBBP3-201ENST00000445497 241 ntBASIC2.97□□□□□ -1.93
PCDHB11Q9Y5F2 SNORD123-201ENST00000459473 70 ntBASIC2.97□□□□□ -1.93
PCDHB11Q9Y5F2 RNU6-521P-201ENST00000516663 105 ntBASIC2.97□□□□□ -1.93
PCDHB11Q9Y5F2 SUB1P4-201ENST00000566062 339 ntBASIC2.97□□□□□ -1.93
PCDHB11Q9Y5F2 MIR548AR-201ENST00000582191 57 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms