Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AL358944.1-201ENST00000528537 144 ntBASIC2.55□□□□□ -2
DDX1Q92499 MIR5197-201ENST00000583721 112 ntBASIC2.55□□□□□ -2
DDX1Q92499 AC103810.6-201ENST00000606708 136 ntBASIC2.55□□□□□ -2
DDX1Q92499 MIR6079-201ENST00000635807 62 ntBASIC2.55□□□□□ -2
DDX1Q92499 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
DDX1Q92499 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
DDX1Q92499 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
DDX1Q92499 Z82195.2-201ENST00000612348 18351 ntBASIC2.54□□□□□ -2
DDX1Q92499 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
DDX1Q92499 RNA5SP289-201ENST00000362332 137 ntBASIC2.54□□□□□ -2
DDX1Q92499 RNU6-440P-201ENST00000390882 105 ntBASIC2.54□□□□□ -2
DDX1Q92499 SNRPGP13-201ENST00000442212 177 ntBASIC2.54□□□□□ -2
DDX1Q92499 AC026436.1-201ENST00000510537 270 ntBASIC2.54□□□□□ -2
DDX1Q92499 SNORA40.13-201ENST00000516379 120 ntBASIC2.54□□□□□ -2
DDX1Q92499 AC084364.2-201ENST00000546924 395 ntBASIC2.54□□□□□ -2
DDX1Q92499 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.54□□□□□ -2
DDX1Q92499 AL137847.3-201ENST00000611521 109 ntBASIC2.54□□□□□ -2
DDX1Q92499 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.54□□□□□ -2
DDX1Q92499 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
DDX1Q92499 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
DDX1Q92499 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.53□□□□□ -2
DDX1Q92499 RNU6-349P-201ENST00000362402 107 ntBASIC2.53□□□□□ -2
DDX1Q92499 SNORA48.1-201ENST00000390879 135 ntBASIC2.53□□□□□ -2
DDX1Q92499 SNORA26.2-201ENST00000390922 122 ntBASIC2.53□□□□□ -2
DDX1Q92499 SNORD23.1-201ENST00000408212 104 ntBASIC2.53□□□□□ -2
DDX1Q92499 Y_RNA.621-201ENST00000411065 96 ntBASIC2.53□□□□□ -2
DDX1Q92499 FTH1P12-201ENST00000432137 551 ntBASIC2.53□□□□□ -2
DDX1Q92499 AC233266.1-201ENST00000454518 96 ntBASIC2.53□□□□□ -2
DDX1Q92499 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.53□□□□□ -2
DDX1Q92499 RNU6-341P-201ENST00000516973 96 ntBASIC2.53□□□□□ -2
DDX1Q92499 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.53□□□□□ -2
DDX1Q92499 AC087685.1-201ENST00000587507 141 ntBASIC2.53□□□□□ -2
DDX1Q92499 AC242852.1-201ENST00000612151 96 ntBASIC2.53□□□□□ -2
DDX1Q92499 AC244015.1-201ENST00000622301 99 ntBASIC2.53□□□□□ -2
DDX1Q92499 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.52□□□□□ -2.01
DDX1Q92499 Y_RNA.49-201ENST00000362714 112 ntBASIC2.52□□□□□ -2.01
DDX1Q92499 Y_RNA.267-201ENST00000364679 109 ntBASIC2.52□□□□□ -2.01
DDX1Q92499 Y_RNA.362-201ENST00000365518 110 ntBASIC2.52□□□□□ -2.01
DDX1Q92499 Y_RNA.558-201ENST00000384685 113 ntBASIC2.52□□□□□ -2.01
DDX1Q92499 MIR522-201ENST00000385071 87 ntBASIC2.52□□□□□ -2.01
DDX1Q92499 RNA5SP501-201ENST00000410990 112 ntBASIC2.52□□□□□ -2.01
DDX1Q92499 SNRPGP14-201ENST00000435400 219 ntBASIC2.52□□□□□ -2.01
DDX1Q92499 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.52□□□□□ -2.01
DDX1Q92499 RNU6-1291P-201ENST00000516591 104 ntBASIC2.52□□□□□ -2.01
DDX1Q92499 RNU6-158P-201ENST00000517104 100 ntBASIC2.52□□□□□ -2.01
DDX1Q92499 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.52□□□□□ -2.01
DDX1Q92499 AC046143.2-201ENST00000609789 160 ntBASIC2.52□□□□□ -2.01
DDX1Q92499 AC092881.1-201ENST00000638218 2733 ntBASIC2.52□□□□□ -2.01
DDX1Q92499 Y_RNA.78-201ENST00000362970 110 ntBASIC2.51□□□□□ -2.01
DDX1Q92499 SNORA63.5-201ENST00000363548 123 ntBASIC2.51□□□□□ -2.01
DDX1Q92499 RNU6-1113P-201ENST00000384348 107 ntBASIC2.51□□□□□ -2.01
DDX1Q92499 MIR1287-201ENST00000408492 90 ntBASIC2.51□□□□□ -2.01
DDX1Q92499 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.51□□□□□ -2.01
DDX1Q92499 AC108729.3-201ENST00000513484 108 ntBASIC2.51□□□□□ -2.01
DDX1Q92499 RNU6-240P-201ENST00000516098 97 ntBASIC2.51□□□□□ -2.01
DDX1Q92499 RNVU1-2-201ENST00000516326 135 ntBASIC2.51□□□□□ -2.01
DDX1Q92499 RNU6-830P-201ENST00000516353 107 ntBASIC2.51□□□□□ -2.01
DDX1Q92499 MIR5009-201ENST00000578736 100 ntBASIC2.51□□□□□ -2.01
DDX1Q92499 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
DDX1Q92499 AL589743.1-201ENST00000551932 2712 ntBASIC2.5□□□□□ -2.01
DDX1Q92499 RNY4P6-201ENST00000363667 96 ntBASIC2.5□□□□□ -2.01
DDX1Q92499 Y_RNA.544-201ENST00000384650 113 ntBASIC2.5□□□□□ -2.01
DDX1Q92499 MIR590-201ENST00000385008 97 ntBASIC2.5□□□□□ -2.01
DDX1Q92499 RNA5SP450-201ENST00000411206 102 ntBASIC2.5□□□□□ -2.01
DDX1Q92499 RNU6-109P-201ENST00000516364 107 ntBASIC2.5□□□□□ -2.01
DDX1Q92499 RNU6-184P-201ENST00000516514 107 ntBASIC2.5□□□□□ -2.01
DDX1Q92499 RNU2-19P-201ENST00000517288 84 ntBASIC2.5□□□□□ -2.01
DDX1Q92499 AC006441.5-201ENST00000612680 209 ntBASIC2.5□□□□□ -2.01
DDX1Q92499 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.49□□□□□ -2.01
DDX1Q92499 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.49□□□□□ -2.01
DDX1Q92499 WWP1P1-201ENST00000466609 2769 ntBASIC2.49□□□□□ -2.01
DDX1Q92499 Y_RNA.410-201ENST00000383992 113 ntBASIC2.49□□□□□ -2.01
DDX1Q92499 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.49□□□□□ -2.01
DDX1Q92499 AC234781.5-201ENST00000508429 271 ntBASIC2.49□□□□□ -2.01
DDX1Q92499 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.49□□□□□ -2.01
DDX1Q92499 RNY4P20-201ENST00000516678 93 ntBASIC2.49□□□□□ -2.01
DDX1Q92499 RNA5SP402-201ENST00000517148 110 ntBASIC2.49□□□□□ -2.01
DDX1Q92499 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
DDX1Q92499 AC068339.1-201ENST00000526965 141 ntBASIC2.49□□□□□ -2.01
DDX1Q92499 MIR4762-201ENST00000585261 75 ntBASIC2.49□□□□□ -2.01
DDX1Q92499 AC062037.1-201ENST00000605302 128 ntBASIC2.49□□□□□ -2.01
DDX1Q92499 AC134878.1-201ENST00000619901 243 ntBASIC2.49□□□□□ -2.01
DDX1Q92499 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.49□□□□□ -2.01
DDX1Q92499 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.49□□□□□ -2.01
DDX1Q92499 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
DDX1Q92499 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
DDX1Q92499 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
DDX1Q92499 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
DDX1Q92499 MIR126-201ENST00000362291 85 ntBASIC2.48□□□□□ -2.01
DDX1Q92499 Y_RNA.242-201ENST00000364473 110 ntBASIC2.48□□□□□ -2.01
DDX1Q92499 RNU6-1275P-201ENST00000391087 107 ntBASIC2.48□□□□□ -2.01
DDX1Q92499 SNORA19.1-201ENST00000410656 129 ntBASIC2.48□□□□□ -2.01
DDX1Q92499 RNU2-7P-201ENST00000410794 178 ntBASIC2.48□□□□□ -2.01
DDX1Q92499 RNU6-938P-201ENST00000411285 103 ntBASIC2.48□□□□□ -2.01
DDX1Q92499 HMGN2P23-201ENST00000456759 269 ntBASIC2.48□□□□□ -2.01
DDX1Q92499 AC055731.1-201ENST00000474387 401 ntBASIC2.48□□□□□ -2.01
DDX1Q92499 RNU6-904P-201ENST00000516206 101 ntBASIC2.48□□□□□ -2.01
DDX1Q92499 AP002004.2-201ENST00000531656 154 ntBASIC2.48□□□□□ -2.01
DDX1Q92499 MIR5007-201ENST00000583098 95 ntBASIC2.48□□□□□ -2.01
DDX1Q92499 Y_RNA.818-201ENST00000618813 71 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 235 ms