Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.54□□□□□ -2.16
RFC1P35251 AC007751.1-201ENST00000529260 376 ntBASIC1.54□□□□□ -2.16
RFC1P35251 AL160236.1-201ENST00000556317 195 ntBASIC1.54□□□□□ -2.16
RFC1P35251 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
RFC1P35251 Y_RNA.23-201ENST00000362496 106 ntBASIC1.53□□□□□ -2.16
RFC1P35251 Y_RNA.150-201ENST00000363562 102 ntBASIC1.53□□□□□ -2.16
RFC1P35251 SNORD61-201ENST00000384252 73 ntBASIC1.53□□□□□ -2.16
RFC1P35251 MIR516B2-201ENST00000385190 85 ntBASIC1.53□□□□□ -2.16
RFC1P35251 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
RFC1P35251 SEPT7P4-201ENST00000437076 306 ntBASIC1.53□□□□□ -2.16
RFC1P35251 AC079140.2-201ENST00000506193 142 ntBASIC1.53□□□□□ -2.16
RFC1P35251 RNA5SP153-201ENST00000516498 76 ntBASIC1.53□□□□□ -2.16
RFC1P35251 RNU6-197P-201ENST00000516680 100 ntBASIC1.53□□□□□ -2.16
RFC1P35251 SNORA31.24-201ENST00000517232 57 ntBASIC1.53□□□□□ -2.16
RFC1P35251 MIR4303-201ENST00000581299 66 ntBASIC1.53□□□□□ -2.16
RFC1P35251 AL121890.5-201ENST00000620848 304 ntBASIC1.53□□□□□ -2.16
RFC1P35251 RNU6-312P-201ENST00000364629 107 ntBASIC1.52□□□□□ -2.17
RFC1P35251 RNU7-25P-201ENST00000516544 62 ntBASIC1.52□□□□□ -2.17
RFC1P35251 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.52□□□□□ -2.17
RFC1P35251 MIR4431-201ENST00000579990 94 ntBASIC1.52□□□□□ -2.17
RFC1P35251 MIR4524B-201ENST00000581569 115 ntBASIC1.52□□□□□ -2.17
RFC1P35251 AL365434.2-201ENST00000607979 234 ntBASIC1.52□□□□□ -2.17
RFC1P35251 AC098479.1-201ENST00000609225 154 ntBASIC1.52□□□□□ -2.17
RFC1P35251 AL161722.3-201ENST00000605789 2983 ntBASIC1.52□□□□□ -2.17
RFC1P35251 RNU6-643P-201ENST00000384018 107 ntBASIC1.51□□□□□ -2.17
RFC1P35251 RNU6-886P-201ENST00000384319 105 ntBASIC1.51□□□□□ -2.17
RFC1P35251 Y_RNA.547-201ENST00000384654 119 ntBASIC1.51□□□□□ -2.17
RFC1P35251 MIR518F-201ENST00000384973 87 ntBASIC1.51□□□□□ -2.17
RFC1P35251 MIR452-201ENST00000385020 85 ntBASIC1.51□□□□□ -2.17
RFC1P35251 SNORA17.3-201ENST00000391159 129 ntBASIC1.51□□□□□ -2.17
RFC1P35251 RNU2-70P-201ENST00000410718 179 ntBASIC1.51□□□□□ -2.17
RFC1P35251 AL353997.5-201ENST00000618886 171 ntBASIC1.51□□□□□ -2.17
RFC1P35251 RNU6-888P-201ENST00000363010 101 ntBASIC1.5□□□□□ -2.17
RFC1P35251 Y_RNA.242-201ENST00000364473 110 ntBASIC1.5□□□□□ -2.17
RFC1P35251 SNORA2.2-201ENST00000365473 135 ntBASIC1.5□□□□□ -2.17
RFC1P35251 SNORD24-201ENST00000383884 75 ntBASIC1.5□□□□□ -2.17
RFC1P35251 SNORD41-201ENST00000386967 70 ntBASIC1.5□□□□□ -2.17
RFC1P35251 MIR802-201ENST00000390235 94 ntBASIC1.5□□□□□ -2.17
RFC1P35251 MIR548O-201ENST00000408583 114 ntBASIC1.5□□□□□ -2.17
RFC1P35251 SNRPGP13-201ENST00000442212 177 ntBASIC1.5□□□□□ -2.17
RFC1P35251 RPS29P23-201ENST00000458635 123 ntBASIC1.5□□□□□ -2.17
RFC1P35251 RNU4-57P-201ENST00000515980 135 ntBASIC1.5□□□□□ -2.17
RFC1P35251 Y_RNA.662-201ENST00000516028 97 ntBASIC1.5□□□□□ -2.17
RFC1P35251 RNU6-830P-201ENST00000516353 107 ntBASIC1.5□□□□□ -2.17
RFC1P35251 RNU6-126P-201ENST00000516685 103 ntBASIC1.5□□□□□ -2.17
RFC1P35251 RNU6-365P-201ENST00000517113 106 ntBASIC1.5□□□□□ -2.17
RFC1P35251 FAM106DP-201ENST00000586416 501 ntBASIC1.5□□□□□ -2.17
RFC1P35251 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
RFC1P35251 U8.1-201ENST00000362843 134 ntBASIC1.49□□□□□ -2.17
RFC1P35251 RNU6-978P-201ENST00000364371 103 ntBASIC1.49□□□□□ -2.17
RFC1P35251 Y_RNA.441-201ENST00000384123 112 ntBASIC1.49□□□□□ -2.17
RFC1P35251 MIR548I3-201ENST00000408378 149 ntBASIC1.49□□□□□ -2.17
RFC1P35251 MIR548I1-201ENST00000408810 149 ntBASIC1.49□□□□□ -2.17
RFC1P35251 RNU6-1135P-201ENST00000411083 103 ntBASIC1.49□□□□□ -2.17
RFC1P35251 AC027119.1-201ENST00000440877 241 ntBASIC1.49□□□□□ -2.17
RFC1P35251 RNA5SP61-201ENST00000516453 100 ntBASIC1.49□□□□□ -2.17
RFC1P35251 RNU6-1270P-201ENST00000517128 108 ntBASIC1.49□□□□□ -2.17
RFC1P35251 AC090049.2-201ENST00000550377 109 ntBASIC1.49□□□□□ -2.17
RFC1P35251 MIR3937-201ENST00000580135 106 ntBASIC1.49□□□□□ -2.17
RFC1P35251 RNU4-84P-201ENST00000364200 139 ntBASIC1.48□□□□□ -2.17
RFC1P35251 SNORA1-201ENST00000384107 130 ntBASIC1.48□□□□□ -2.17
RFC1P35251 SNORD38C-201ENST00000384381 69 ntBASIC1.48□□□□□ -2.17
RFC1P35251 Y_RNA.555-201ENST00000384673 110 ntBASIC1.48□□□□□ -2.17
RFC1P35251 MIR136-201ENST00000385207 82 ntBASIC1.48□□□□□ -2.17
RFC1P35251 SNORA26-201ENST00000391286 122 ntBASIC1.48□□□□□ -2.17
RFC1P35251 AC006461.1-201ENST00000412637 326 ntBASIC1.48□□□□□ -2.17
RFC1P35251 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.48□□□□□ -2.17
RFC1P35251 RNU6-693P-201ENST00000516134 107 ntBASIC1.48□□□□□ -2.17
RFC1P35251 AC019176.1-201ENST00000518519 225 ntBASIC1.48□□□□□ -2.17
RFC1P35251 MIR378D2-201ENST00000580636 98 ntBASIC1.48□□□□□ -2.17
RFC1P35251 AC015726.2-201ENST00000620112 122 ntBASIC1.48□□□□□ -2.17
RFC1P35251 Y_RNA.270-201ENST00000364693 104 ntBASIC1.47□□□□□ -2.17
RFC1P35251 RNU6-482P-201ENST00000391068 107 ntBASIC1.47□□□□□ -2.17
RFC1P35251 RNU6-938P-201ENST00000411285 103 ntBASIC1.47□□□□□ -2.17
RFC1P35251 RNU6-504P-201ENST00000516568 104 ntBASIC1.47□□□□□ -2.17
RFC1P35251 RNU6-922P-201ENST00000516753 99 ntBASIC1.47□□□□□ -2.17
RFC1P35251 AL513534.2-201ENST00000603836 250 ntBASIC1.47□□□□□ -2.17
RFC1P35251 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.47□□□□□ -2.17
RFC1P35251 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.47□□□□□ -2.17
RFC1P35251 SNORD26-201ENST00000384147 75 ntBASIC1.46□□□□□ -2.18
RFC1P35251 RNU6-1065P-201ENST00000384513 106 ntBASIC1.46□□□□□ -2.18
RFC1P35251 SNORA79-201ENST00000408376 140 ntBASIC1.46□□□□□ -2.18
RFC1P35251 RNU6-394P-201ENST00000410735 107 ntBASIC1.46□□□□□ -2.18
RFC1P35251 RPS27P16-201ENST00000425758 201 ntBASIC1.46□□□□□ -2.18
RFC1P35251 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.46□□□□□ -2.18
RFC1P35251 AF228730.3-201ENST00000436691 102 ntBASIC1.46□□□□□ -2.18
RFC1P35251 RNU7-121P-201ENST00000516604 62 ntBASIC1.46□□□□□ -2.18
RFC1P35251 SNORA18.7-201ENST00000516910 131 ntBASIC1.46□□□□□ -2.18
RFC1P35251 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.46□□□□□ -2.18
RFC1P35251 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.46□□□□□ -2.18
RFC1P35251 Y_RNA.180-201ENST00000363867 113 ntBASIC1.45□□□□□ -2.18
RFC1P35251 RNA5SP99-201ENST00000364020 114 ntBASIC1.45□□□□□ -2.18
RFC1P35251 SNORD28B-201ENST00000390993 75 ntBASIC1.45□□□□□ -2.18
RFC1P35251 U8.17-201ENST00000391292 132 ntBASIC1.45□□□□□ -2.18
RFC1P35251 SNORD123-201ENST00000459473 70 ntBASIC1.45□□□□□ -2.18
RFC1P35251 AC005840.1-201ENST00000498412 377 ntBASIC1.45□□□□□ -2.18
RFC1P35251 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.45□□□□□ -2.18
RFC1P35251 SNORA74.3-201ENST00000517108 154 ntBASIC1.45□□□□□ -2.18
RFC1P35251 RNU7-181P-201ENST00000517234 74 ntBASIC1.45□□□□□ -2.18
RFC1P35251 MIR548AR-201ENST00000582191 57 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms