Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 SNORD115-36-201ENST00000365629 82 ntBASIC-1.78□□□□□ -2.69
SCN11AQ9UI33 RNU6-905P-201ENST00000384434 107 ntBASIC-1.78□□□□□ -2.69
SCN11AQ9UI33 RNA5SP237-201ENST00000410414 113 ntBASIC-1.78□□□□□ -2.69
SCN11AQ9UI33 RNU4-55P-201ENST00000410731 137 ntBASIC-1.78□□□□□ -2.69
SCN11AQ9UI33 SNORA25.16-201ENST00000516741 121 ntBASIC-1.78□□□□□ -2.69
SCN11AQ9UI33 MIR4473-201ENST00000583731 91 ntBASIC-1.78□□□□□ -2.69
SCN11AQ9UI33 SNORD115-40-201ENST00000606510 82 ntBASIC-1.78□□□□□ -2.69
SCN11AQ9UI33 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.79□□□□□ -2.7
SCN11AQ9UI33 RNU6-769P-201ENST00000384407 104 ntBASIC-1.79□□□□□ -2.7
SCN11AQ9UI33 RNU6-1178P-201ENST00000516674 107 ntBASIC-1.79□□□□□ -2.7
SCN11AQ9UI33 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.79□□□□□ -2.7
SCN11AQ9UI33 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.8□□□□□ -2.7
SCN11AQ9UI33 SNORA20.2-201ENST00000383922 131 ntBASIC-1.8□□□□□ -2.7
SCN11AQ9UI33 RNU6-154P-201ENST00000384306 106 ntBASIC-1.8□□□□□ -2.7
SCN11AQ9UI33 SNORA72.6-201ENST00000384520 129 ntBASIC-1.8□□□□□ -2.7
SCN11AQ9UI33 MIR29B1-201ENST00000385015 81 ntBASIC-1.8□□□□□ -2.7
SCN11AQ9UI33 USMG5P1-201ENST00000425964 177 ntBASIC-1.8□□□□□ -2.7
SCN11AQ9UI33 AC134698.4-201ENST00000523451 826 ntBASIC-1.8□□□□□ -2.7
SCN11AQ9UI33 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.8□□□□□ -2.7
SCN11AQ9UI33 MIR3920-201ENST00000581751 86 ntBASIC-1.8□□□□□ -2.7
SCN11AQ9UI33 AL158209.2-201ENST00000619266 216 ntBASIC-1.8□□□□□ -2.7
SCN11AQ9UI33 Y_RNA.46-201ENST00000362695 102 ntBASIC-1.8□□□□□ -2.7
SCN11AQ9UI33 RNU6-913P-201ENST00000390913 95 ntBASIC-1.8□□□□□ -2.7
SCN11AQ9UI33 snoU13.13-201ENST00000458842 104 ntBASIC-1.8□□□□□ -2.7
SCN11AQ9UI33 RNU6-612P-201ENST00000516909 102 ntBASIC-1.8□□□□□ -2.7
SCN11AQ9UI33 RNU6-966P-201ENST00000516479 104 ntBASIC-1.81□□□□□ -2.7
SCN11AQ9UI33 AC009248.2-201ENST00000619826 254 ntBASIC-1.81□□□□□ -2.7
SCN11AQ9UI33 SNORD114-17-201ENST00000364699 75 ntBASIC-1.82□□□□□ -2.7
SCN11AQ9UI33 RNU6-393P-201ENST00000384475 107 ntBASIC-1.82□□□□□ -2.7
SCN11AQ9UI33 RNU6-298P-201ENST00000390888 96 ntBASIC-1.82□□□□□ -2.7
SCN11AQ9UI33 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.82□□□□□ -2.7
SCN11AQ9UI33 MTCO2P29-201ENST00000465212 189 ntBASIC-1.82□□□□□ -2.7
SCN11AQ9UI33 RNU6-410P-201ENST00000517006 107 ntBASIC-1.82□□□□□ -2.7
SCN11AQ9UI33 MIR6502-201ENST00000617296 76 ntBASIC-1.82□□□□□ -2.7
SCN11AQ9UI33 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-1.82□□□□□ -2.7
SCN11AQ9UI33 MIR410-201ENST00000362222 80 ntBASIC-1.82□□□□□ -2.7
SCN11AQ9UI33 RNU6-723P-201ENST00000383973 107 ntBASIC-1.82□□□□□ -2.7
SCN11AQ9UI33 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.82□□□□□ -2.7
SCN11AQ9UI33 MIR617-201ENST00000385030 97 ntBASIC-1.82□□□□□ -2.7
SCN11AQ9UI33 MTND4LP7-201ENST00000431728 294 ntBASIC-1.82□□□□□ -2.7
SCN11AQ9UI33 UBE2D3P4-201ENST00000441973 436 ntBASIC-1.82□□□□□ -2.7
SCN11AQ9UI33 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.82□□□□□ -2.7
SCN11AQ9UI33 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.82□□□□□ -2.7
SCN11AQ9UI33 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.82□□□□□ -2.7
SCN11AQ9UI33 AC087752.4-201ENST00000605911 462 ntBASIC-1.82□□□□□ -2.7
SCN11AQ9UI33 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.83□□□□□ -2.7
SCN11AQ9UI33 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.83□□□□□ -2.7
SCN11AQ9UI33 MIR1284-201ENST00000408337 120 ntBASIC-1.83□□□□□ -2.7
SCN11AQ9UI33 AC108729.2-201ENST00000476543 840 ntBASIC-1.83□□□□□ -2.7
SCN11AQ9UI33 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.83□□□□□ -2.7
SCN11AQ9UI33 RNU6-531P-201ENST00000516694 104 ntBASIC-1.83□□□□□ -2.7
SCN11AQ9UI33 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.84□□□□□ -2.7
SCN11AQ9UI33 MTND2P18-201ENST00000419962 1030 ntBASIC-1.84□□□□□ -2.7
SCN11AQ9UI33 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-1.84□□□□□ -2.7
SCN11AQ9UI33 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.84□□□□□ -2.7
SCN11AQ9UI33 MIR4520-1-201ENST00000582609 70 ntBASIC-1.84□□□□□ -2.7
SCN11AQ9UI33 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.84□□□□□ -2.7
SCN11AQ9UI33 RNU6-179P-201ENST00000363350 107 ntBASIC-1.85□□□□□ -2.7
SCN11AQ9UI33 SNORD115-35-201ENST00000365122 82 ntBASIC-1.85□□□□□ -2.7
SCN11AQ9UI33 RNU6-641P-201ENST00000384006 107 ntBASIC-1.85□□□□□ -2.7
SCN11AQ9UI33 MTND3P9-201ENST00000429526 346 ntBASIC-1.85□□□□□ -2.7
SCN11AQ9UI33 AL353813.1-201ENST00000440700 253 ntBASIC-1.85□□□□□ -2.7
SCN11AQ9UI33 RPS29P24-201ENST00000486345 171 ntBASIC-1.85□□□□□ -2.7
SCN11AQ9UI33 AL137161.1-201ENST00000532231 390 ntBASIC-1.85□□□□□ -2.7
SCN11AQ9UI33 MIR548H5-201ENST00000580314 60 ntBASIC-1.85□□□□□ -2.7
SCN11AQ9UI33 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.85□□□□□ -2.7
SCN11AQ9UI33 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.85□□□□□ -2.71
SCN11AQ9UI33 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.85□□□□□ -2.71
SCN11AQ9UI33 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.85□□□□□ -2.71
SCN11AQ9UI33 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.85□□□□□ -2.71
SCN11AQ9UI33 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.85□□□□□ -2.71
SCN11AQ9UI33 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.85□□□□□ -2.71
SCN11AQ9UI33 RNU6-466P-201ENST00000391224 103 ntBASIC-1.85□□□□□ -2.71
SCN11AQ9UI33 RNU6-588P-201ENST00000410281 105 ntBASIC-1.85□□□□□ -2.71
SCN11AQ9UI33 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-1.85□□□□□ -2.71
SCN11AQ9UI33 AC005972.2-201ENST00000604690 348 ntBASIC-1.85□□□□□ -2.71
SCN11AQ9UI33 AC131235.4-201ENST00000609288 620 ntBASIC-1.85□□□□□ -2.71
SCN11AQ9UI33 AC145423.2-201ENST00000610631 239 ntBASIC-1.85□□□□□ -2.71
SCN11AQ9UI33 RNU4-1-201ENST00000363925 141 ntBASIC-1.86□□□□□ -2.71
SCN11AQ9UI33 SNORD115-32-201ENST00000364079 82 ntBASIC-1.86□□□□□ -2.71
SCN11AQ9UI33 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.86□□□□□ -2.71
SCN11AQ9UI33 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.86□□□□□ -2.71
SCN11AQ9UI33 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-1.86□□□□□ -2.71
SCN11AQ9UI33 ZNF92P2-201ENST00000600543 1059 ntBASIC-1.86□□□□□ -2.71
SCN11AQ9UI33 RNU7-10P-201ENST00000607194 63 ntBASIC-1.86□□□□□ -2.71
SCN11AQ9UI33 AC245297.2-201ENST00000610119 565 ntBASIC-1.86□□□□□ -2.71
SCN11AQ9UI33 PART1_1.1-201ENST00000611761 217 ntBASIC-1.86□□□□□ -2.71
SCN11AQ9UI33 MIR6818-201ENST00000621576 65 ntBASIC-1.86□□□□□ -2.71
SCN11AQ9UI33 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.87□□□□□ -2.71
SCN11AQ9UI33 SNORD115-7-201ENST00000365306 82 ntBASIC-1.87□□□□□ -2.71
SCN11AQ9UI33 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.87□□□□□ -2.71
SCN11AQ9UI33 RPS27AP14-201ENST00000422868 454 ntBASIC-1.87□□□□□ -2.71
SCN11AQ9UI33 DISC2.1-201ENST00000612827 205 ntBASIC-1.87□□□□□ -2.71
SCN11AQ9UI33 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.87□□□□□ -2.71
SCN11AQ9UI33 Y_RNA.361-201ENST00000365515 120 ntBASIC-1.87□□□□□ -2.71
SCN11AQ9UI33 Y_RNA.465-201ENST00000384293 102 ntBASIC-1.87□□□□□ -2.71
SCN11AQ9UI33 RNU7-53P-201ENST00000516705 60 ntBASIC-1.87□□□□□ -2.71
SCN11AQ9UI33 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.87□□□□□ -2.71
SCN11AQ9UI33 MIR5704-201ENST00000584029 77 ntBASIC-1.87□□□□□ -2.71
SCN11AQ9UI33 AC022441.3-201ENST00000605737 136 ntBASIC-1.87□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 209.3 ms