Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 ZNF209P-201ENST00000593450 2304 ntBASIC1.89□□□□□ -2.11
RTFDC1Q9BY42 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.89□□□□□ -2.11
RTFDC1Q9BY42 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.88□□□□□ -2.11
RTFDC1Q9BY42 RNU6-383P-201ENST00000410864 94 ntBASIC1.88□□□□□ -2.11
RTFDC1Q9BY42 RN7SKP164-201ENST00000516138 266 ntBASIC1.88□□□□□ -2.11
RTFDC1Q9BY42 SNORA31.24-201ENST00000517232 57 ntBASIC1.88□□□□□ -2.11
RTFDC1Q9BY42 AC024614.2-201ENST00000577584 372 ntBASIC1.88□□□□□ -2.11
RTFDC1Q9BY42 MIR4285-201ENST00000581001 85 ntBASIC1.88□□□□□ -2.11
RTFDC1Q9BY42 SNORD50B-201ENST00000364995 70 ntBASIC1.87□□□□□ -2.11
RTFDC1Q9BY42 MIR653-201ENST00000385279 96 ntBASIC1.87□□□□□ -2.11
RTFDC1Q9BY42 SNORA26-201ENST00000391286 122 ntBASIC1.87□□□□□ -2.11
RTFDC1Q9BY42 NDUFA4P2-201ENST00000489989 244 ntBASIC1.87□□□□□ -2.11
RTFDC1Q9BY42 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.87□□□□□ -2.11
RTFDC1Q9BY42 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.87□□□□□ -2.11
RTFDC1Q9BY42 AL391903.3-201ENST00000612158 163 ntBASIC1.87□□□□□ -2.11
RTFDC1Q9BY42 AL121890.5-201ENST00000620848 304 ntBASIC1.87□□□□□ -2.11
RTFDC1Q9BY42 Y_RNA.24-201ENST00000362508 103 ntBASIC1.86□□□□□ -2.11
RTFDC1Q9BY42 Y_RNA.60-201ENST00000362831 98 ntBASIC1.86□□□□□ -2.11
RTFDC1Q9BY42 Y_RNA.65-201ENST00000362846 100 ntBASIC1.86□□□□□ -2.11
RTFDC1Q9BY42 RNU6-103P-201ENST00000363686 107 ntBASIC1.86□□□□□ -2.11
RTFDC1Q9BY42 RNU6-1138P-201ENST00000365359 106 ntBASIC1.86□□□□□ -2.11
RTFDC1Q9BY42 MIR136-201ENST00000385207 82 ntBASIC1.86□□□□□ -2.11
RTFDC1Q9BY42 RNU1-123P-201ENST00000458950 160 ntBASIC1.86□□□□□ -2.11
RTFDC1Q9BY42 RNU6-902P-201ENST00000517212 91 ntBASIC1.86□□□□□ -2.11
RTFDC1Q9BY42 RNU6-1116P-201ENST00000517269 99 ntBASIC1.86□□□□□ -2.11
RTFDC1Q9BY42 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RTFDC1Q9BY42 RNY1-201ENST00000364228 113 ntBASIC1.85□□□□□ -2.11
RTFDC1Q9BY42 MIR616-201ENST00000385293 97 ntBASIC1.85□□□□□ -2.11
RTFDC1Q9BY42 MIR1278-201ENST00000408753 81 ntBASIC1.85□□□□□ -2.11
RTFDC1Q9BY42 RNU6-651P-201ENST00000411040 105 ntBASIC1.85□□□□□ -2.11
RTFDC1Q9BY42 RNU2-55P-201ENST00000411146 174 ntBASIC1.85□□□□□ -2.11
RTFDC1Q9BY42 AC093850.1-201ENST00000454121 251 ntBASIC1.85□□□□□ -2.11
RTFDC1Q9BY42 RNU6-1271P-201ENST00000517049 105 ntBASIC1.85□□□□□ -2.11
RTFDC1Q9BY42 MIR4643-201ENST00000577473 78 ntBASIC1.85□□□□□ -2.11
RTFDC1Q9BY42 AC106754.2-201ENST00000623006 233 ntBASIC1.85□□□□□ -2.11
RTFDC1Q9BY42 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.85□□□□□ -2.11
RTFDC1Q9BY42 Y_RNA.76-201ENST00000362931 109 ntBASIC1.84□□□□□ -2.11
RTFDC1Q9BY42 Y_RNA.229-201ENST00000364347 113 ntBASIC1.84□□□□□ -2.11
RTFDC1Q9BY42 Y_RNA.476-201ENST00000384347 108 ntBASIC1.84□□□□□ -2.11
RTFDC1Q9BY42 Y_RNA.515-201ENST00000384535 112 ntBASIC1.84□□□□□ -2.11
RTFDC1Q9BY42 MIR1298-201ENST00000408783 112 ntBASIC1.84□□□□□ -2.11
RTFDC1Q9BY42 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.84□□□□□ -2.11
RTFDC1Q9BY42 AC092991.1-201ENST00000477176 376 ntBASIC1.84□□□□□ -2.11
RTFDC1Q9BY42 MTND1P19-201ENST00000511780 315 ntBASIC1.84□□□□□ -2.11
RTFDC1Q9BY42 SNORD77.4-201ENST00000516158 81 ntBASIC1.84□□□□□ -2.11
RTFDC1Q9BY42 AC019176.1-201ENST00000518519 225 ntBASIC1.84□□□□□ -2.11
RTFDC1Q9BY42 SNORA4-201ENST00000584302 138 ntBASIC1.84□□□□□ -2.11
RTFDC1Q9BY42 AL365434.2-201ENST00000607979 234 ntBASIC1.84□□□□□ -2.11
RTFDC1Q9BY42 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
RTFDC1Q9BY42 Y_RNA.224-201ENST00000364308 111 ntBASIC1.83□□□□□ -2.12
RTFDC1Q9BY42 RNY4P28-201ENST00000365281 93 ntBASIC1.83□□□□□ -2.12
RTFDC1Q9BY42 Y_RNA.539-201ENST00000384635 107 ntBASIC1.83□□□□□ -2.12
RTFDC1Q9BY42 RNU6-1228P-201ENST00000391014 107 ntBASIC1.83□□□□□ -2.12
RTFDC1Q9BY42 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.83□□□□□ -2.12
RTFDC1Q9BY42 snoU13.18-201ENST00000459483 104 ntBASIC1.83□□□□□ -2.12
RTFDC1Q9BY42 SNORD116-28-201ENST00000516123 91 ntBASIC1.83□□□□□ -2.12
RTFDC1Q9BY42 RNU7-149P-201ENST00000516739 59 ntBASIC1.83□□□□□ -2.12
RTFDC1Q9BY42 AL049861.1-201ENST00000603130 150 ntBASIC1.83□□□□□ -2.12
RTFDC1Q9BY42 GHRLOS.1-201ENST00000610995 70 ntBASIC1.83□□□□□ -2.12
RTFDC1Q9BY42 RNU6-653P-201ENST00000363074 106 ntBASIC1.82□□□□□ -2.12
RTFDC1Q9BY42 Y_RNA.552-201ENST00000384665 112 ntBASIC1.82□□□□□ -2.12
RTFDC1Q9BY42 AC015922.2-201ENST00000435593 184 ntBASIC1.82□□□□□ -2.12
RTFDC1Q9BY42 RNA5SP102-201ENST00000516865 106 ntBASIC1.82□□□□□ -2.12
RTFDC1Q9BY42 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.82□□□□□ -2.12
RTFDC1Q9BY42 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
RTFDC1Q9BY42 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
RTFDC1Q9BY42 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
RTFDC1Q9BY42 RNU4-10P-201ENST00000364383 140 ntBASIC1.81□□□□□ -2.12
RTFDC1Q9BY42 RNU6-53P-201ENST00000365367 106 ntBASIC1.81□□□□□ -2.12
RTFDC1Q9BY42 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.81□□□□□ -2.12
RTFDC1Q9BY42 Y_RNA.587-201ENST00000391210 103 ntBASIC1.81□□□□□ -2.12
RTFDC1Q9BY42 FAM106DP-201ENST00000586416 501 ntBASIC1.81□□□□□ -2.12
RTFDC1Q9BY42 AC006441.5-201ENST00000612680 209 ntBASIC1.81□□□□□ -2.12
RTFDC1Q9BY42 AL353770.2-201ENST00000620024 78 ntBASIC1.81□□□□□ -2.12
RTFDC1Q9BY42 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
RTFDC1Q9BY42 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
RTFDC1Q9BY42 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
RTFDC1Q9BY42 RNU6-381P-201ENST00000391259 108 ntBASIC1.8□□□□□ -2.12
RTFDC1Q9BY42 AL354695.1-201ENST00000427935 228 ntBASIC1.8□□□□□ -2.12
RTFDC1Q9BY42 RPL39P39-201ENST00000455840 151 ntBASIC1.8□□□□□ -2.12
RTFDC1Q9BY42 RNU6-917P-201ENST00000516294 104 ntBASIC1.8□□□□□ -2.12
RTFDC1Q9BY42 RNU1-92P-201ENST00000517017 135 ntBASIC1.8□□□□□ -2.12
RTFDC1Q9BY42 RNU6-111P-201ENST00000517179 105 ntBASIC1.8□□□□□ -2.12
RTFDC1Q9BY42 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.8□□□□□ -2.12
RTFDC1Q9BY42 AC011921.3-201ENST00000605540 361 ntBASIC1.8□□□□□ -2.12
RTFDC1Q9BY42 Pinc.1-201ENST00000616452 154 ntBASIC1.8□□□□□ -2.12
RTFDC1Q9BY42 AC141273.2-201ENST00000618989 130 ntBASIC1.8□□□□□ -2.12
RTFDC1Q9BY42 Y_RNA.121-201ENST00000363309 113 ntBASIC1.79□□□□□ -2.12
RTFDC1Q9BY42 Y_RNA.199-201ENST00000364014 102 ntBASIC1.79□□□□□ -2.12
RTFDC1Q9BY42 Y_RNA.200-201ENST00000364018 102 ntBASIC1.79□□□□□ -2.12
RTFDC1Q9BY42 SNORA79-201ENST00000408376 140 ntBASIC1.79□□□□□ -2.12
RTFDC1Q9BY42 Y_RNA.626-201ENST00000411288 95 ntBASIC1.79□□□□□ -2.12
RTFDC1Q9BY42 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.79□□□□□ -2.12
RTFDC1Q9BY42 RNU6-1299P-201ENST00000516316 100 ntBASIC1.79□□□□□ -2.12
RTFDC1Q9BY42 RNU6-830P-201ENST00000516353 107 ntBASIC1.79□□□□□ -2.12
RTFDC1Q9BY42 Y_RNA.680-201ENST00000516441 93 ntBASIC1.79□□□□□ -2.12
RTFDC1Q9BY42 AC090142.3-201ENST00000519012 385 ntBASIC1.79□□□□□ -2.12
RTFDC1Q9BY42 Z83818.1-201ENST00000603584 150 ntBASIC1.79□□□□□ -2.12
RTFDC1Q9BY42 AL157834.3-201ENST00000615543 103 ntBASIC1.79□□□□□ -2.12
RTFDC1Q9BY42 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms