Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 AC133485.4-201ENST00000561835 220 ntBASIC1.97□□□□□ -2.09
SNHG28P0DPA3 AC138907.4-201ENST00000570107 226 ntBASIC1.97□□□□□ -2.09
SNHG28P0DPA3 MIR3129-201ENST00000581095 76 ntBASIC1.97□□□□□ -2.09
SNHG28P0DPA3 AC073413.2-201ENST00000604332 360 ntBASIC1.97□□□□□ -2.09
SNHG28P0DPA3 AL022345.2-201ENST00000606307 135 ntBASIC1.97□□□□□ -2.09
SNHG28P0DPA3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
SNHG28P0DPA3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.97□□□□□ -2.09
SNHG28P0DPA3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.09
SNHG28P0DPA3 RNU6-1138P-201ENST00000365359 106 ntBASIC1.96□□□□□ -2.1
SNHG28P0DPA3 MIR548A1-201ENST00000385041 97 ntBASIC1.96□□□□□ -2.1
SNHG28P0DPA3 SNORA12.1-201ENST00000390873 148 ntBASIC1.96□□□□□ -2.1
SNHG28P0DPA3 AC123900.1-201ENST00000420390 96 ntBASIC1.96□□□□□ -2.1
SNHG28P0DPA3 AC008134.1-201ENST00000420943 193 ntBASIC1.96□□□□□ -2.1
SNHG28P0DPA3 RN7SKP19-201ENST00000516016 252 ntBASIC1.96□□□□□ -2.1
SNHG28P0DPA3 RNU6-1291P-201ENST00000516591 104 ntBASIC1.96□□□□□ -2.1
SNHG28P0DPA3 NDUFA5P6-201ENST00000542110 379 ntBASIC1.96□□□□□ -2.1
SNHG28P0DPA3 MIR4679-2-201ENST00000578358 77 ntBASIC1.96□□□□□ -2.1
SNHG28P0DPA3 Y_RNA.757-201ENST00000578934 114 ntBASIC1.96□□□□□ -2.1
SNHG28P0DPA3 AC105245.1-201ENST00000581934 244 ntBASIC1.96□□□□□ -2.1
SNHG28P0DPA3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.96□□□□□ -2.1
SNHG28P0DPA3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SNHG28P0DPA3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.95□□□□□ -2.1
SNHG28P0DPA3 SNRPGP10-201ENST00000432323 225 ntBASIC1.95□□□□□ -2.1
SNHG28P0DPA3 AL357134.1-201ENST00000445848 426 ntBASIC1.95□□□□□ -2.1
SNHG28P0DPA3 OR9P1P-201ENST00000496431 281 ntBASIC1.95□□□□□ -2.1
SNHG28P0DPA3 Y_RNA.666-201ENST00000516187 112 ntBASIC1.95□□□□□ -2.1
SNHG28P0DPA3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.95□□□□□ -2.1
SNHG28P0DPA3 MIR3618-201ENST00000580330 88 ntBASIC1.95□□□□□ -2.1
SNHG28P0DPA3 AL365205.2-201ENST00000594586 68 ntBASIC1.95□□□□□ -2.1
SNHG28P0DPA3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.95□□□□□ -2.1
SNHG28P0DPA3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SNHG28P0DPA3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SNHG28P0DPA3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.94□□□□□ -2.1
SNHG28P0DPA3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SNHG28P0DPA3 MIR450A1-201ENST00000362262 91 ntBASIC1.94□□□□□ -2.1
SNHG28P0DPA3 SNORD116-21-201ENST00000384507 92 ntBASIC1.94□□□□□ -2.1
SNHG28P0DPA3 MIR624-201ENST00000385217 97 ntBASIC1.94□□□□□ -2.1
SNHG28P0DPA3 RNU6-1186P-201ENST00000410429 97 ntBASIC1.94□□□□□ -2.1
SNHG28P0DPA3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.94□□□□□ -2.1
SNHG28P0DPA3 AL603825.1-201ENST00000438481 80 ntBASIC1.94□□□□□ -2.1
SNHG28P0DPA3 RN7SL274P-201ENST00000492268 272 ntBASIC1.94□□□□□ -2.1
SNHG28P0DPA3 SCARNA15-202ENST00000516881 127 ntBASIC1.94□□□□□ -2.1
SNHG28P0DPA3 AL670379.3-201ENST00000605040 251 ntBASIC1.94□□□□□ -2.1
SNHG28P0DPA3 U6.95-201ENST00000636931 70 ntBASIC1.94□□□□□ -2.1
SNHG28P0DPA3 MTND5P18-201ENST00000445624 1801 ntBASIC1.94□□□□□ -2.1
SNHG28P0DPA3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.93□□□□□ -2.1
SNHG28P0DPA3 Y_RNA.253-201ENST00000364562 112 ntBASIC1.93□□□□□ -2.1
SNHG28P0DPA3 RNU6-220P-201ENST00000390919 107 ntBASIC1.93□□□□□ -2.1
SNHG28P0DPA3 SNORD77.3-201ENST00000391113 65 ntBASIC1.93□□□□□ -2.1
SNHG28P0DPA3 CALM2P4-201ENST00000430810 426 ntBASIC1.93□□□□□ -2.1
SNHG28P0DPA3 AL161788.1-201ENST00000441805 169 ntBASIC1.93□□□□□ -2.1
SNHG28P0DPA3 CKS1BP2-201ENST00000497342 240 ntBASIC1.93□□□□□ -2.1
SNHG28P0DPA3 AC011406.1-201ENST00000512440 370 ntBASIC1.93□□□□□ -2.1
SNHG28P0DPA3 RNU6-168P-201ENST00000516189 101 ntBASIC1.93□□□□□ -2.1
SNHG28P0DPA3 RNU6-1041P-201ENST00000516254 102 ntBASIC1.93□□□□□ -2.1
SNHG28P0DPA3 RNU2-34P-201ENST00000516534 121 ntBASIC1.93□□□□□ -2.1
SNHG28P0DPA3 RNU6-1270P-201ENST00000517128 108 ntBASIC1.93□□□□□ -2.1
SNHG28P0DPA3 MIR502-201ENST00000606349 86 ntBASIC1.93□□□□□ -2.1
SNHG28P0DPA3 MIR338-201ENST00000636369 67 ntBASIC1.93□□□□□ -2.1
SNHG28P0DPA3 AC008555.8-201ENST00000623602 2168 ntBASIC1.93□□□□□ -2.1
SNHG28P0DPA3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SNHG28P0DPA3 Y_RNA.549-201ENST00000384657 102 ntBASIC1.92□□□□□ -2.1
SNHG28P0DPA3 MIR548A3-201ENST00000385297 97 ntBASIC1.92□□□□□ -2.1
SNHG28P0DPA3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SNHG28P0DPA3 SNORD23.1-201ENST00000408212 104 ntBASIC1.92□□□□□ -2.1
SNHG28P0DPA3 AF228730.3-201ENST00000436691 102 ntBASIC1.92□□□□□ -2.1
SNHG28P0DPA3 AC008507.4-201ENST00000585464 127 ntBASIC1.92□□□□□ -2.1
SNHG28P0DPA3 uc_338.28-201ENST00000612082 187 ntBASIC1.92□□□□□ -2.1
SNHG28P0DPA3 AC025166.1-201ENST00000612411 163 ntBASIC1.92□□□□□ -2.1
SNHG28P0DPA3 snoU2-30.2-201ENST00000362805 70 ntBASIC1.91□□□□□ -2.1
SNHG28P0DPA3 MIR518F-201ENST00000384973 87 ntBASIC1.91□□□□□ -2.1
SNHG28P0DPA3 MT-TI-201ENST00000387365 69 ntBASIC1.91□□□□□ -2.1
SNHG28P0DPA3 MIR1262-201ENST00000408276 93 ntBASIC1.91□□□□□ -2.1
SNHG28P0DPA3 RNA5SP127-201ENST00000411051 133 ntBASIC1.91□□□□□ -2.1
SNHG28P0DPA3 AL606517.2-201ENST00000442855 241 ntBASIC1.91□□□□□ -2.1
SNHG28P0DPA3 AC233266.1-201ENST00000454518 96 ntBASIC1.91□□□□□ -2.1
SNHG28P0DPA3 Y_RNA.649-201ENST00000459077 103 ntBASIC1.91□□□□□ -2.1
SNHG28P0DPA3 SNORA18.4-201ENST00000516440 124 ntBASIC1.91□□□□□ -2.1
SNHG28P0DPA3 RNU6-365P-201ENST00000517113 106 ntBASIC1.91□□□□□ -2.1
SNHG28P0DPA3 MIR2681-201ENST00000581814 105 ntBASIC1.91□□□□□ -2.1
SNHG28P0DPA3 MIR4448-201ENST00000584360 86 ntBASIC1.91□□□□□ -2.1
SNHG28P0DPA3 AC242852.1-201ENST00000612151 96 ntBASIC1.91□□□□□ -2.1
SNHG28P0DPA3 AL591926.4-201ENST00000616895 298 ntBASIC1.91□□□□□ -2.1
SNHG28P0DPA3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.91□□□□□ -2.1
SNHG28P0DPA3 AC244015.1-201ENST00000622301 99 ntBASIC1.91□□□□□ -2.1
SNHG28P0DPA3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.91□□□□□ -2.1
SNHG28P0DPA3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SNHG28P0DPA3 RNU6-888P-201ENST00000363010 101 ntBASIC1.9□□□□□ -2.11
SNHG28P0DPA3 RNU6-457P-201ENST00000363999 107 ntBASIC1.9□□□□□ -2.11
SNHG28P0DPA3 RNU6-647P-201ENST00000364243 107 ntBASIC1.9□□□□□ -2.11
SNHG28P0DPA3 RNA5SP125-201ENST00000364843 120 ntBASIC1.9□□□□□ -2.11
SNHG28P0DPA3 RNU4-52P-201ENST00000384209 138 ntBASIC1.9□□□□□ -2.11
SNHG28P0DPA3 RNU6-106P-201ENST00000384405 107 ntBASIC1.9□□□□□ -2.11
SNHG28P0DPA3 SNORA67.5-201ENST00000391036 107 ntBASIC1.9□□□□□ -2.11
SNHG28P0DPA3 MIR1263-201ENST00000408324 86 ntBASIC1.9□□□□□ -2.11
SNHG28P0DPA3 Y_RNA.621-201ENST00000411065 96 ntBASIC1.9□□□□□ -2.11
SNHG28P0DPA3 HMGN1P7-201ENST00000491722 313 ntBASIC1.9□□□□□ -2.11
SNHG28P0DPA3 AC023141.11-201ENST00000508864 202 ntBASIC1.9□□□□□ -2.11
SNHG28P0DPA3 RNU7-99P-201ENST00000516271 62 ntBASIC1.9□□□□□ -2.11
SNHG28P0DPA3 RNU6-1149P-201ENST00000516810 97 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms