Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PCDHA13Q9Y5I0 AC131280.1-202ENST00000624067 4211 ntBASIC2.05□□□□□ -2.08
PCDHA13Q9Y5I0 RNU6-1084P-201ENST00000362498 107 ntBASIC2.05□□□□□ -2.08
PCDHA13Q9Y5I0 RNU6-643P-201ENST00000384018 107 ntBASIC2.05□□□□□ -2.08
PCDHA13Q9Y5I0 MIR17-201ENST00000385012 84 ntBASIC2.05□□□□□ -2.08
PCDHA13Q9Y5I0 RNU6-239P-201ENST00000390990 99 ntBASIC2.05□□□□□ -2.08
PCDHA13Q9Y5I0 Y_RNA.580-201ENST00000391004 95 ntBASIC2.05□□□□□ -2.08
PCDHA13Q9Y5I0 RN7SKP223-201ENST00000410582 62 ntBASIC2.05□□□□□ -2.08
PCDHA13Q9Y5I0 snoU13.26-201ENST00000459452 105 ntBASIC2.05□□□□□ -2.08
PCDHA13Q9Y5I0 AC099513.1-201ENST00000490423 301 ntBASIC2.05□□□□□ -2.08
PCDHA13Q9Y5I0 RNU7-121P-201ENST00000516604 62 ntBASIC2.05□□□□□ -2.08
PCDHA13Q9Y5I0 RNA5SP168-201ENST00000516642 112 ntBASIC2.05□□□□□ -2.08
PCDHA13Q9Y5I0 MIR4287-201ENST00000579398 78 ntBASIC2.05□□□□□ -2.08
PCDHA13Q9Y5I0 AC120024.3-201ENST00000603167 156 ntBASIC2.05□□□□□ -2.08
PCDHA13Q9Y5I0 MIR219B-201ENST00000637023 88 ntBASIC2.05□□□□□ -2.08
PCDHA13Q9Y5I0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
PCDHA13Q9Y5I0 AL596028.1-201ENST00000326971 197 ntBASIC2.04□□□□□ -2.08
PCDHA13Q9Y5I0 RNU6-833P-201ENST00000363486 107 ntBASIC2.04□□□□□ -2.08
PCDHA13Q9Y5I0 Y_RNA.272-201ENST00000364696 102 ntBASIC2.04□□□□□ -2.08
PCDHA13Q9Y5I0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
PCDHA13Q9Y5I0 Y_RNA.486-201ENST00000384398 107 ntBASIC2.04□□□□□ -2.08
PCDHA13Q9Y5I0 SNORD72-201ENST00000390994 80 ntBASIC2.04□□□□□ -2.08
PCDHA13Q9Y5I0 U8.16-201ENST00000391279 133 ntBASIC2.04□□□□□ -2.08
PCDHA13Q9Y5I0 CALM2P4-201ENST00000430810 426 ntBASIC2.04□□□□□ -2.08
PCDHA13Q9Y5I0 HMGN2P32-201ENST00000444648 269 ntBASIC2.04□□□□□ -2.08
PCDHA13Q9Y5I0 PGBD4P5-201ENST00000445958 426 ntBASIC2.04□□□□□ -2.08
PCDHA13Q9Y5I0 RPL23AP6-201ENST00000446637 472 ntBASIC2.04□□□□□ -2.08
PCDHA13Q9Y5I0 RNU7-34P-201ENST00000459394 64 ntBASIC2.04□□□□□ -2.08
PCDHA13Q9Y5I0 AC107027.2-201ENST00000512197 115 ntBASIC2.04□□□□□ -2.08
PCDHA13Q9Y5I0 MIR4713-201ENST00000582691 75 ntBASIC2.04□□□□□ -2.08
PCDHA13Q9Y5I0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.04□□□□□ -2.08
PCDHA13Q9Y5I0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
PCDHA13Q9Y5I0 RNU6-661P-201ENST00000362409 107 ntBASIC2.03□□□□□ -2.08
PCDHA13Q9Y5I0 SNORD14E-201ENST00000364009 85 ntBASIC2.03□□□□□ -2.08
PCDHA13Q9Y5I0 Y_RNA.634-201ENST00000364811 113 ntBASIC2.03□□□□□ -2.08
PCDHA13Q9Y5I0 RNU6-442P-201ENST00000383968 104 ntBASIC2.03□□□□□ -2.08
PCDHA13Q9Y5I0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.03□□□□□ -2.08
PCDHA13Q9Y5I0 RNU6-365P-201ENST00000517113 106 ntBASIC2.03□□□□□ -2.08
PCDHA13Q9Y5I0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.03□□□□□ -2.08
PCDHA13Q9Y5I0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.03□□□□□ -2.08
PCDHA13Q9Y5I0 AC006441.5-201ENST00000612680 209 ntBASIC2.03□□□□□ -2.08
PCDHA13Q9Y5I0 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.03□□□□□ -2.08
PCDHA13Q9Y5I0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
PCDHA13Q9Y5I0 AL442644.1-201ENST00000454390 3105 ntBASIC2.02□□□□□ -2.09
PCDHA13Q9Y5I0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
PCDHA13Q9Y5I0 MIR424-201ENST00000362227 98 ntBASIC2.02□□□□□ -2.09
PCDHA13Q9Y5I0 Y_RNA.337-201ENST00000365312 102 ntBASIC2.02□□□□□ -2.09
PCDHA13Q9Y5I0 RNU6-163P-201ENST00000384396 106 ntBASIC2.02□□□□□ -2.09
PCDHA13Q9Y5I0 MIR194-1-201ENST00000384892 85 ntBASIC2.02□□□□□ -2.09
PCDHA13Q9Y5I0 RNU2-70P-201ENST00000410718 179 ntBASIC2.02□□□□□ -2.09
PCDHA13Q9Y5I0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.02□□□□□ -2.09
PCDHA13Q9Y5I0 SNRPGP14-201ENST00000435400 219 ntBASIC2.02□□□□□ -2.09
PCDHA13Q9Y5I0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.02□□□□□ -2.09
PCDHA13Q9Y5I0 RNA5SP233-201ENST00000459153 113 ntBASIC2.02□□□□□ -2.09
PCDHA13Q9Y5I0 AC114811.1-201ENST00000507207 168 ntBASIC2.02□□□□□ -2.09
PCDHA13Q9Y5I0 MIR4299-201ENST00000577899 72 ntBASIC2.02□□□□□ -2.09
PCDHA13Q9Y5I0 MIR3144-201ENST00000579460 79 ntBASIC2.02□□□□□ -2.09
PCDHA13Q9Y5I0 MIR378D2-201ENST00000580636 98 ntBASIC2.02□□□□□ -2.09
PCDHA13Q9Y5I0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
PCDHA13Q9Y5I0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
PCDHA13Q9Y5I0 RNU6-1123P-201ENST00000362347 106 ntBASIC2.01□□□□□ -2.09
PCDHA13Q9Y5I0 MIR504-201ENST00000385065 83 ntBASIC2.01□□□□□ -2.09
PCDHA13Q9Y5I0 MIR660-201ENST00000385235 97 ntBASIC2.01□□□□□ -2.09
PCDHA13Q9Y5I0 AL356379.1-201ENST00000414105 126 ntBASIC2.01□□□□□ -2.09
PCDHA13Q9Y5I0 RNU6-504P-201ENST00000516568 104 ntBASIC2.01□□□□□ -2.09
PCDHA13Q9Y5I0 SNORA16.1-201ENST00000364597 132 ntBASIC2□□□□□ -2.09
PCDHA13Q9Y5I0 SNORD24-201ENST00000383884 75 ntBASIC2□□□□□ -2.09
PCDHA13Q9Y5I0 MIR802-201ENST00000390235 94 ntBASIC2□□□□□ -2.09
PCDHA13Q9Y5I0 MIR891A-201ENST00000401237 79 ntBASIC2□□□□□ -2.09
PCDHA13Q9Y5I0 AC006461.1-201ENST00000412637 326 ntBASIC2□□□□□ -2.09
PCDHA13Q9Y5I0 AL161935.2-201ENST00000414627 60 ntBASIC2□□□□□ -2.09
PCDHA13Q9Y5I0 snoU13.15-201ENST00000459407 104 ntBASIC2□□□□□ -2.09
PCDHA13Q9Y5I0 RNU7-12P-201ENST00000516030 62 ntBASIC2□□□□□ -2.09
PCDHA13Q9Y5I0 RNU6-1116P-201ENST00000517269 99 ntBASIC2□□□□□ -2.09
PCDHA13Q9Y5I0 AL627230.6-201ENST00000611129 280 ntBASIC2□□□□□ -2.09
PCDHA13Q9Y5I0 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2□□□□□ -2.09
PCDHA13Q9Y5I0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
PCDHA13Q9Y5I0 Y_RNA.66-201ENST00000362862 102 ntBASIC1.99□□□□□ -2.09
PCDHA13Q9Y5I0 RNU6-414P-201ENST00000363705 104 ntBASIC1.99□□□□□ -2.09
PCDHA13Q9Y5I0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
PCDHA13Q9Y5I0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.99□□□□□ -2.09
PCDHA13Q9Y5I0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.99□□□□□ -2.09
PCDHA13Q9Y5I0 JTBP1-201ENST00000441314 247 ntBASIC1.99□□□□□ -2.09
PCDHA13Q9Y5I0 SNORD116-25-201ENST00000516517 92 ntBASIC1.99□□□□□ -2.09
PCDHA13Q9Y5I0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.99□□□□□ -2.09
PCDHA13Q9Y5I0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
PCDHA13Q9Y5I0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
PCDHA13Q9Y5I0 Y_RNA.91-201ENST00000363042 107 ntBASIC1.98□□□□□ -2.09
PCDHA13Q9Y5I0 RNU6-268P-201ENST00000364174 107 ntBASIC1.98□□□□□ -2.09
PCDHA13Q9Y5I0 RNU6-978P-201ENST00000364371 103 ntBASIC1.98□□□□□ -2.09
PCDHA13Q9Y5I0 RNU6-597P-201ENST00000365620 102 ntBASIC1.98□□□□□ -2.09
PCDHA13Q9Y5I0 AC004965.1-201ENST00000413033 213 ntBASIC1.98□□□□□ -2.09
PCDHA13Q9Y5I0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
PCDHA13Q9Y5I0 MIR4419B-201ENST00000577260 68 ntBASIC1.98□□□□□ -2.09
PCDHA13Q9Y5I0 AC104465.1-201ENST00000611365 139 ntBASIC1.98□□□□□ -2.09
PCDHA13Q9Y5I0 MIR7843-201ENST00000622274 79 ntBASIC1.98□□□□□ -2.09
PCDHA13Q9Y5I0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.98□□□□□ -2.09
PCDHA13Q9Y5I0 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
PCDHA13Q9Y5I0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
PCDHA13Q9Y5I0 RNU6-888P-201ENST00000363010 101 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 192.8 ms