Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 AL161722.3-201ENST00000605789 2983 ntBASIC1.32□□□□□ -2.2
LRIF1Q5T3J3 uc_338.4-201ENST00000616635 176 ntBASIC1.32□□□□□ -2.2
LRIF1Q5T3J3 AC068700.1-201ENST00000565862 3754 ntBASIC1.31□□□□□ -2.2
LRIF1Q5T3J3 RNA5SP190-201ENST00000365222 118 ntBASIC1.31□□□□□ -2.2
LRIF1Q5T3J3 Y_RNA.562-201ENST00000384695 113 ntBASIC1.31□□□□□ -2.2
LRIF1Q5T3J3 MIR758-201ENST00000390227 88 ntBASIC1.31□□□□□ -2.2
LRIF1Q5T3J3 Y_RNA.590-201ENST00000410140 107 ntBASIC1.31□□□□□ -2.2
LRIF1Q5T3J3 SNRPGP14-201ENST00000435400 219 ntBASIC1.31□□□□□ -2.2
LRIF1Q5T3J3 SNRPGP13-201ENST00000442212 177 ntBASIC1.31□□□□□ -2.2
LRIF1Q5T3J3 RPL39P39-201ENST00000455840 151 ntBASIC1.31□□□□□ -2.2
LRIF1Q5T3J3 RPS29P23-201ENST00000458635 123 ntBASIC1.31□□□□□ -2.2
LRIF1Q5T3J3 Y_RNA.668-201ENST00000516233 93 ntBASIC1.31□□□□□ -2.2
LRIF1Q5T3J3 RNU6-830P-201ENST00000516353 107 ntBASIC1.31□□□□□ -2.2
LRIF1Q5T3J3 RNU6-165P-201ENST00000517170 99 ntBASIC1.31□□□□□ -2.2
LRIF1Q5T3J3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.31□□□□□ -2.2
LRIF1Q5T3J3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.31□□□□□ -2.2
LRIF1Q5T3J3 AC068338.1-201ENST00000565567 176 ntBASIC1.31□□□□□ -2.2
LRIF1Q5T3J3 U4.1-201ENST00000620349 87 ntBASIC1.31□□□□□ -2.2
LRIF1Q5T3J3 Y_RNA.122-201ENST00000363331 96 ntBASIC1.3□□□□□ -2.2
LRIF1Q5T3J3 RNU6-1138P-201ENST00000365359 106 ntBASIC1.3□□□□□ -2.2
LRIF1Q5T3J3 MIR626-201ENST00000385032 94 ntBASIC1.3□□□□□ -2.2
LRIF1Q5T3J3 RNU6-1132P-201ENST00000459214 107 ntBASIC1.3□□□□□ -2.2
LRIF1Q5T3J3 Y_RNA.679-201ENST00000516416 91 ntBASIC1.3□□□□□ -2.2
LRIF1Q5T3J3 RNU6-126P-201ENST00000516685 103 ntBASIC1.3□□□□□ -2.2
LRIF1Q5T3J3 RNU6-548P-201ENST00000517083 115 ntBASIC1.3□□□□□ -2.2
LRIF1Q5T3J3 SNORA74.3-201ENST00000517108 154 ntBASIC1.3□□□□□ -2.2
LRIF1Q5T3J3 AC006441.5-201ENST00000612680 209 ntBASIC1.3□□□□□ -2.2
LRIF1Q5T3J3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
LRIF1Q5T3J3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.29□□□□□ -2.2
LRIF1Q5T3J3 RNU6-268P-201ENST00000364174 107 ntBASIC1.29□□□□□ -2.2
LRIF1Q5T3J3 MIR516B2-201ENST00000385190 85 ntBASIC1.29□□□□□ -2.2
LRIF1Q5T3J3 AL603910.2-201ENST00000407268 136 ntBASIC1.29□□□□□ -2.2
LRIF1Q5T3J3 RNU2-38P-201ENST00000410856 79 ntBASIC1.29□□□□□ -2.2
LRIF1Q5T3J3 RNU6-1054P-201ENST00000411293 104 ntBASIC1.29□□□□□ -2.2
LRIF1Q5T3J3 AC100767.1-201ENST00000528178 123 ntBASIC1.29□□□□□ -2.2
LRIF1Q5T3J3 MIR4662B-201ENST00000579498 81 ntBASIC1.29□□□□□ -2.2
LRIF1Q5T3J3 BX284668.6-201ENST00000606899 438 ntBASIC1.29□□□□□ -2.2
LRIF1Q5T3J3 Y_RNA.304-201ENST00000365011 112 ntBASIC1.28□□□□□ -2.2
LRIF1Q5T3J3 Y_RNA.416-201ENST00000384014 113 ntBASIC1.28□□□□□ -2.2
LRIF1Q5T3J3 SNORD72-201ENST00000390994 80 ntBASIC1.28□□□□□ -2.2
LRIF1Q5T3J3 RPS29P29-201ENST00000456396 171 ntBASIC1.28□□□□□ -2.2
LRIF1Q5T3J3 Y_RNA.638-201ENST00000459374 113 ntBASIC1.28□□□□□ -2.2
LRIF1Q5T3J3 SNORD77.4-201ENST00000516158 81 ntBASIC1.28□□□□□ -2.2
LRIF1Q5T3J3 RNU7-149P-201ENST00000516739 59 ntBASIC1.28□□□□□ -2.2
LRIF1Q5T3J3 AL645939.4-201ENST00000604495 135 ntBASIC1.28□□□□□ -2.2
LRIF1Q5T3J3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.28□□□□□ -2.2
LRIF1Q5T3J3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
LRIF1Q5T3J3 Y_RNA.24-201ENST00000362508 103 ntBASIC1.27□□□□□ -2.21
LRIF1Q5T3J3 RNU6-196P-201ENST00000384315 107 ntBASIC1.27□□□□□ -2.21
LRIF1Q5T3J3 Y_RNA.478-201ENST00000384358 107 ntBASIC1.27□□□□□ -2.21
LRIF1Q5T3J3 RNU6-651P-201ENST00000411040 105 ntBASIC1.27□□□□□ -2.21
LRIF1Q5T3J3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.27□□□□□ -2.21
LRIF1Q5T3J3 AC245047.8-201ENST00000456455 284 ntBASIC1.27□□□□□ -2.21
LRIF1Q5T3J3 SNORD13-201ENST00000459299 104 ntBASIC1.27□□□□□ -2.21
LRIF1Q5T3J3 COX6CP14-201ENST00000469580 174 ntBASIC1.27□□□□□ -2.21
LRIF1Q5T3J3 RN7SL429P-201ENST00000479090 223 ntBASIC1.27□□□□□ -2.21
LRIF1Q5T3J3 RN7SL489P-201ENST00000486185 223 ntBASIC1.27□□□□□ -2.21
LRIF1Q5T3J3 RN7SL327P-201ENST00000488659 223 ntBASIC1.27□□□□□ -2.21
LRIF1Q5T3J3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.27□□□□□ -2.21
LRIF1Q5T3J3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.27□□□□□ -2.21
LRIF1Q5T3J3 RNU7-43P-201ENST00000516554 64 ntBASIC1.27□□□□□ -2.21
LRIF1Q5T3J3 AL162730.1-201ENST00000605734 292 ntBASIC1.27□□□□□ -2.21
LRIF1Q5T3J3 Pinc.1-201ENST00000616452 154 ntBASIC1.27□□□□□ -2.21
LRIF1Q5T3J3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.27□□□□□ -2.21
LRIF1Q5T3J3 RN7SL853P-201ENST00000617250 223 ntBASIC1.27□□□□□ -2.21
LRIF1Q5T3J3 MIR26B-201ENST00000362251 77 ntBASIC1.26□□□□□ -2.21
LRIF1Q5T3J3 RNY3P5-201ENST00000384127 102 ntBASIC1.26□□□□□ -2.21
LRIF1Q5T3J3 MIR1289-2-201ENST00000408360 111 ntBASIC1.26□□□□□ -2.21
LRIF1Q5T3J3 SNORD123-201ENST00000459473 70 ntBASIC1.26□□□□□ -2.21
LRIF1Q5T3J3 SNORD111.1-201ENST00000516421 86 ntBASIC1.26□□□□□ -2.21
LRIF1Q5T3J3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.26□□□□□ -2.21
LRIF1Q5T3J3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.26□□□□□ -2.21
LRIF1Q5T3J3 AL049861.1-201ENST00000603130 150 ntBASIC1.26□□□□□ -2.21
LRIF1Q5T3J3 AC062037.2-201ENST00000610137 73 ntBASIC1.26□□□□□ -2.21
LRIF1Q5T3J3 MIR7843-201ENST00000622274 79 ntBASIC1.26□□□□□ -2.21
LRIF1Q5T3J3 Y_RNA.193-201ENST00000363979 102 ntBASIC1.25□□□□□ -2.21
LRIF1Q5T3J3 Y_RNA.229-201ENST00000364347 113 ntBASIC1.25□□□□□ -2.21
LRIF1Q5T3J3 RNU4-10P-201ENST00000364383 140 ntBASIC1.25□□□□□ -2.21
LRIF1Q5T3J3 Y_RNA.277-201ENST00000364754 102 ntBASIC1.25□□□□□ -2.21
LRIF1Q5T3J3 RNU6-702P-201ENST00000364982 107 ntBASIC1.25□□□□□ -2.21
LRIF1Q5T3J3 Y_RNA.350-201ENST00000365409 98 ntBASIC1.25□□□□□ -2.21
LRIF1Q5T3J3 Y_RNA.452-201ENST00000384202 108 ntBASIC1.25□□□□□ -2.21
LRIF1Q5T3J3 SNORD58.1-201ENST00000391313 66 ntBASIC1.25□□□□□ -2.21
LRIF1Q5T3J3 RNU2-55P-201ENST00000411146 174 ntBASIC1.25□□□□□ -2.21
LRIF1Q5T3J3 SNORA31.4-201ENST00000516049 129 ntBASIC1.25□□□□□ -2.21
LRIF1Q5T3J3 RNU6-947P-201ENST00000516264 106 ntBASIC1.25□□□□□ -2.21
LRIF1Q5T3J3 MIR4503-201ENST00000582187 83 ntBASIC1.25□□□□□ -2.21
LRIF1Q5T3J3 AL442067.1-201ENST00000613261 223 ntBASIC1.25□□□□□ -2.21
LRIF1Q5T3J3 AL365265.1-201ENST00000621045 234 ntBASIC1.25□□□□□ -2.21
LRIF1Q5T3J3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.25□□□□□ -2.21
LRIF1Q5T3J3 Y_RNA.20-201ENST00000362479 113 ntBASIC1.24□□□□□ -2.21
LRIF1Q5T3J3 Y_RNA.54-201ENST00000362766 105 ntBASIC1.24□□□□□ -2.21
LRIF1Q5T3J3 RNU6-463P-201ENST00000384340 107 ntBASIC1.24□□□□□ -2.21
LRIF1Q5T3J3 MIR520C-201ENST00000385005 87 ntBASIC1.24□□□□□ -2.21
LRIF1Q5T3J3 Y_RNA.587-201ENST00000391210 103 ntBASIC1.24□□□□□ -2.21
LRIF1Q5T3J3 AC245047.7-201ENST00000440265 293 ntBASIC1.24□□□□□ -2.21
LRIF1Q5T3J3 AL133373.1-201ENST00000497098 94 ntBASIC1.24□□□□□ -2.21
LRIF1Q5T3J3 SNORA18.7-201ENST00000516910 131 ntBASIC1.24□□□□□ -2.21
LRIF1Q5T3J3 MIR4643-201ENST00000577473 78 ntBASIC1.24□□□□□ -2.21
LRIF1Q5T3J3 7SK.10-201ENST00000621414 298 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 320.6 ms