Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 SNORD33.1-201ENST00000516213 88 ntBASIC2.54□□□□□ -2
PTCHD1Q96NR3 RNU7-28P-201ENST00000516759 62 ntBASIC2.54□□□□□ -2
PTCHD1Q96NR3 RNU6-1149P-201ENST00000516810 97 ntBASIC2.54□□□□□ -2
PTCHD1Q96NR3 MIR4319-201ENST00000577285 85 ntBASIC2.54□□□□□ -2
PTCHD1Q96NR3 AC069114.2-201ENST00000604699 304 ntBASIC2.54□□□□□ -2
PTCHD1Q96NR3 AC006441.5-201ENST00000612680 209 ntBASIC2.54□□□□□ -2
PTCHD1Q96NR3 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.54□□□□□ -2
PTCHD1Q96NR3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.54□□□□□ -2
PTCHD1Q96NR3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
PTCHD1Q96NR3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PTCHD1Q96NR3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.53□□□□□ -2
PTCHD1Q96NR3 SNORA11.2-201ENST00000408318 127 ntBASIC2.53□□□□□ -2
PTCHD1Q96NR3 RNA5SP184-201ENST00000411071 108 ntBASIC2.53□□□□□ -2
PTCHD1Q96NR3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.53□□□□□ -2
PTCHD1Q96NR3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.53□□□□□ -2
PTCHD1Q96NR3 AL021397.1-201ENST00000451806 248 ntBASIC2.53□□□□□ -2
PTCHD1Q96NR3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.53□□□□□ -2
PTCHD1Q96NR3 RNU6-781P-201ENST00000516377 101 ntBASIC2.53□□□□□ -2
PTCHD1Q96NR3 SNORD45.4-201ENST00000516629 73 ntBASIC2.53□□□□□ -2
PTCHD1Q96NR3 AC084364.2-201ENST00000546924 395 ntBASIC2.53□□□□□ -2
PTCHD1Q96NR3 AC108081.1-201ENST00000604358 221 ntBASIC2.53□□□□□ -2
PTCHD1Q96NR3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.53□□□□□ -2
PTCHD1Q96NR3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
PTCHD1Q96NR3 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.53□□□□□ -2.01
PTCHD1Q96NR3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PTCHD1Q96NR3 RNU6-268P-201ENST00000364174 107 ntBASIC2.52□□□□□ -2.01
PTCHD1Q96NR3 RNU6-153P-201ENST00000364422 104 ntBASIC2.52□□□□□ -2.01
PTCHD1Q96NR3 RNU6-1019P-201ENST00000364424 107 ntBASIC2.52□□□□□ -2.01
PTCHD1Q96NR3 MIR196B-201ENST00000384852 84 ntBASIC2.52□□□□□ -2.01
PTCHD1Q96NR3 RNU6-440P-201ENST00000390882 105 ntBASIC2.52□□□□□ -2.01
PTCHD1Q96NR3 RNY4P18-201ENST00000391107 89 ntBASIC2.52□□□□□ -2.01
PTCHD1Q96NR3 SUMO1P4-201ENST00000429430 302 ntBASIC2.52□□□□□ -2.01
PTCHD1Q96NR3 RN7SKP19-201ENST00000516016 252 ntBASIC2.52□□□□□ -2.01
PTCHD1Q96NR3 RNA5SP137-201ENST00000516833 135 ntBASIC2.52□□□□□ -2.01
PTCHD1Q96NR3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.52□□□□□ -2.01
PTCHD1Q96NR3 AC134878.1-201ENST00000619901 243 ntBASIC2.52□□□□□ -2.01
PTCHD1Q96NR3 MIR8054-201ENST00000620877 86 ntBASIC2.52□□□□□ -2.01
PTCHD1Q96NR3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.52□□□□□ -2.01
PTCHD1Q96NR3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
PTCHD1Q96NR3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PTCHD1Q96NR3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
PTCHD1Q96NR3 AC062016.1-201ENST00000355719 319 ntBASIC2.51□□□□□ -2.01
PTCHD1Q96NR3 RNU6-859P-201ENST00000362728 107 ntBASIC2.51□□□□□ -2.01
PTCHD1Q96NR3 Y_RNA.336-201ENST00000365307 109 ntBASIC2.51□□□□□ -2.01
PTCHD1Q96NR3 SNRPGP14-201ENST00000435400 219 ntBASIC2.51□□□□□ -2.01
PTCHD1Q96NR3 STAG3L5P-204ENST00000443759 179 ntBASIC2.51□□□□□ -2.01
PTCHD1Q96NR3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.51□□□□□ -2.01
PTCHD1Q96NR3 RNU7-25P-201ENST00000516544 62 ntBASIC2.51□□□□□ -2.01
PTCHD1Q96NR3 SCARNA15-202ENST00000516881 127 ntBASIC2.51□□□□□ -2.01
PTCHD1Q96NR3 Y_RNA.709-201ENST00000516952 92 ntBASIC2.51□□□□□ -2.01
PTCHD1Q96NR3 MIR5094-201ENST00000578766 85 ntBASIC2.51□□□□□ -2.01
PTCHD1Q96NR3 MIR5197-201ENST00000583721 112 ntBASIC2.51□□□□□ -2.01
PTCHD1Q96NR3 AL670379.3-201ENST00000605040 251 ntBASIC2.51□□□□□ -2.01
PTCHD1Q96NR3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.51□□□□□ -2.01
PTCHD1Q96NR3 MIR376A2-201ENST00000636782 80 ntBASIC2.51□□□□□ -2.01
PTCHD1Q96NR3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.51□□□□□ -2.01
PTCHD1Q96NR3 ICE2P2-201ENST00000483823 2787 ntBASIC2.5□□□□□ -2.01
PTCHD1Q96NR3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.5□□□□□ -2.01
PTCHD1Q96NR3 Y_RNA.410-201ENST00000383992 113 ntBASIC2.5□□□□□ -2.01
PTCHD1Q96NR3 SNORA80E-201ENST00000384744 137 ntBASIC2.5□□□□□ -2.01
PTCHD1Q96NR3 MIR597-201ENST00000384968 97 ntBASIC2.5□□□□□ -2.01
PTCHD1Q96NR3 MIR548A3-201ENST00000385297 97 ntBASIC2.5□□□□□ -2.01
PTCHD1Q96NR3 RNU11-3P-201ENST00000391111 133 ntBASIC2.5□□□□□ -2.01
PTCHD1Q96NR3 HMGN2P35-201ENST00000412164 270 ntBASIC2.5□□□□□ -2.01
PTCHD1Q96NR3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.5□□□□□ -2.01
PTCHD1Q96NR3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.5□□□□□ -2.01
PTCHD1Q96NR3 RNU6-589P-201ENST00000516485 107 ntBASIC2.5□□□□□ -2.01
PTCHD1Q96NR3 AC004486.1-201ENST00000546846 233 ntBASIC2.5□□□□□ -2.01
PTCHD1Q96NR3 MIR4635-201ENST00000583759 79 ntBASIC2.5□□□□□ -2.01
PTCHD1Q96NR3 MIR4658-201ENST00000584344 65 ntBASIC2.5□□□□□ -2.01
PTCHD1Q96NR3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.5□□□□□ -2.01
PTCHD1Q96NR3 AC025166.1-201ENST00000612411 163 ntBASIC2.5□□□□□ -2.01
PTCHD1Q96NR3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
PTCHD1Q96NR3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.5□□□□□ -2.01
PTCHD1Q96NR3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PTCHD1Q96NR3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PTCHD1Q96NR3 AP006437.1-201ENST00000641440 3685 ntBASIC2.49□□□□□ -2.01
PTCHD1Q96NR3 SNORA63.4-201ENST00000362763 126 ntBASIC2.49□□□□□ -2.01
PTCHD1Q96NR3 Y_RNA.547-201ENST00000384654 119 ntBASIC2.49□□□□□ -2.01
PTCHD1Q96NR3 MIRLET7F2-201ENST00000385277 83 ntBASIC2.49□□□□□ -2.01
PTCHD1Q96NR3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.49□□□□□ -2.01
PTCHD1Q96NR3 AC069257.2-201ENST00000441819 155 ntBASIC2.49□□□□□ -2.01
PTCHD1Q96NR3 HMGN2P32-201ENST00000444648 269 ntBASIC2.49□□□□□ -2.01
PTCHD1Q96NR3 AC108938.1-201ENST00000451204 136 ntBASIC2.49□□□□□ -2.01
PTCHD1Q96NR3 PDCD5P2-201ENST00000507570 312 ntBASIC2.49□□□□□ -2.01
PTCHD1Q96NR3 RNU6-113P-201ENST00000516653 101 ntBASIC2.49□□□□□ -2.01
PTCHD1Q96NR3 SNORA28-201ENST00000606769 126 ntBASIC2.49□□□□□ -2.01
PTCHD1Q96NR3 AL121890.5-201ENST00000620848 304 ntBASIC2.49□□□□□ -2.01
PTCHD1Q96NR3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.49□□□□□ -2.01
PTCHD1Q96NR3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.49□□□□□ -2.01
PTCHD1Q96NR3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PTCHD1Q96NR3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PTCHD1Q96NR3 SNORD115-28-201ENST00000363931 81 ntBASIC2.48□□□□□ -2.01
PTCHD1Q96NR3 Y_RNA.346-201ENST00000365385 112 ntBASIC2.48□□□□□ -2.01
PTCHD1Q96NR3 RNU6-1189P-201ENST00000383958 107 ntBASIC2.48□□□□□ -2.01
PTCHD1Q96NR3 SNORA31.10-201ENST00000516482 106 ntBASIC2.48□□□□□ -2.01
PTCHD1Q96NR3 SNORA31.15-201ENST00000516771 132 ntBASIC2.48□□□□□ -2.01
PTCHD1Q96NR3 IGKV1-22-201ENST00000524313 326 ntBASIC2.48□□□□□ -2.01
PTCHD1Q96NR3 MIR3670-2-201ENST00000582974 65 ntBASIC2.48□□□□□ -2.01
PTCHD1Q96NR3 MIR3670-1-201ENST00000584160 65 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 203.2 ms