Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 MIR8054-201ENST00000620877 86 ntBASIC2.49□□□□□ -2.01
NPHS1O60500 MIR376A2-201ENST00000636782 80 ntBASIC2.49□□□□□ -2.01
NPHS1O60500 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
NPHS1O60500 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
NPHS1O60500 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.48□□□□□ -2.01
NPHS1O60500 AC131280.1-202ENST00000624067 4211 ntBASIC2.48□□□□□ -2.01
NPHS1O60500 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NPHS1O60500 snoU2-30.1-201ENST00000365012 70 ntBASIC2.48□□□□□ -2.01
NPHS1O60500 RNU6-429P-201ENST00000384582 108 ntBASIC2.48□□□□□ -2.01
NPHS1O60500 MIR548O-201ENST00000408583 114 ntBASIC2.48□□□□□ -2.01
NPHS1O60500 MIR1283-2-201ENST00000408621 87 ntBASIC2.48□□□□□ -2.01
NPHS1O60500 RNU6-1064P-201ENST00000410626 104 ntBASIC2.48□□□□□ -2.01
NPHS1O60500 AC007064.1-201ENST00000412238 351 ntBASIC2.48□□□□□ -2.01
NPHS1O60500 SNRPGP14-201ENST00000435400 219 ntBASIC2.48□□□□□ -2.01
NPHS1O60500 STAG3L5P-204ENST00000443759 179 ntBASIC2.48□□□□□ -2.01
NPHS1O60500 FO624990.1-201ENST00000636373 85 ntBASIC2.48□□□□□ -2.01
NPHS1O60500 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
NPHS1O60500 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
NPHS1O60500 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
NPHS1O60500 RNA5SP456-201ENST00000364002 114 ntBASIC2.47□□□□□ -2.01
NPHS1O60500 RNU6-268P-201ENST00000364174 107 ntBASIC2.47□□□□□ -2.01
NPHS1O60500 RNU6-647P-201ENST00000364243 107 ntBASIC2.47□□□□□ -2.01
NPHS1O60500 HMGN2P3-201ENST00000433603 273 ntBASIC2.47□□□□□ -2.01
NPHS1O60500 HMGN2P5-201ENST00000436882 273 ntBASIC2.47□□□□□ -2.01
NPHS1O60500 RNU6-781P-201ENST00000516377 101 ntBASIC2.47□□□□□ -2.01
NPHS1O60500 SNORA31.10-201ENST00000516482 106 ntBASIC2.47□□□□□ -2.01
NPHS1O60500 RNU7-25P-201ENST00000516544 62 ntBASIC2.47□□□□□ -2.01
NPHS1O60500 RNU7-28P-201ENST00000516759 62 ntBASIC2.47□□□□□ -2.01
NPHS1O60500 RNU6-1149P-201ENST00000516810 97 ntBASIC2.47□□□□□ -2.01
NPHS1O60500 RNU6-1116P-201ENST00000517269 99 ntBASIC2.47□□□□□ -2.01
NPHS1O60500 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
NPHS1O60500 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
NPHS1O60500 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.46□□□□□ -2.02
NPHS1O60500 RNA5SP393-201ENST00000363423 117 ntBASIC2.46□□□□□ -2.02
NPHS1O60500 RNU1-52P-201ENST00000384190 164 ntBASIC2.46□□□□□ -2.02
NPHS1O60500 RNU6-476P-201ENST00000384726 107 ntBASIC2.46□□□□□ -2.02
NPHS1O60500 RNU2-52P-201ENST00000410680 190 ntBASIC2.46□□□□□ -2.02
NPHS1O60500 Y_RNA.617-201ENST00000410920 90 ntBASIC2.46□□□□□ -2.02
NPHS1O60500 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.46□□□□□ -2.02
NPHS1O60500 MTND5P34-201ENST00000568888 325 ntBASIC2.46□□□□□ -2.02
NPHS1O60500 RPL12P50-201ENST00000603116 116 ntBASIC2.46□□□□□ -2.02
NPHS1O60500 AC108081.1-201ENST00000604358 221 ntBASIC2.46□□□□□ -2.02
NPHS1O60500 AC005000.2-201ENST00000605468 310 ntBASIC2.46□□□□□ -2.02
NPHS1O60500 MIR6129-201ENST00000616087 109 ntBASIC2.46□□□□□ -2.02
NPHS1O60500 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NPHS1O60500 SNORD58C-201ENST00000365223 64 ntBASIC2.45□□□□□ -2.02
NPHS1O60500 RNU6-1144P-201ENST00000384247 104 ntBASIC2.45□□□□□ -2.02
NPHS1O60500 SNORA80E-201ENST00000384744 137 ntBASIC2.45□□□□□ -2.02
NPHS1O60500 MIR518A2-201ENST00000384966 87 ntBASIC2.45□□□□□ -2.02
NPHS1O60500 HSPE1P9-201ENST00000440046 311 ntBASIC2.45□□□□□ -2.02
NPHS1O60500 MTATP6P21-201ENST00000440681 189 ntBASIC2.45□□□□□ -2.02
NPHS1O60500 RNVU1-2-201ENST00000516326 135 ntBASIC2.45□□□□□ -2.02
NPHS1O60500 RNA5SP367-201ENST00000516557 118 ntBASIC2.45□□□□□ -2.02
NPHS1O60500 SCARNA15-202ENST00000516881 127 ntBASIC2.45□□□□□ -2.02
NPHS1O60500 RNA5SP402-201ENST00000517148 110 ntBASIC2.45□□□□□ -2.02
NPHS1O60500 MIR4446-201ENST00000578505 67 ntBASIC2.45□□□□□ -2.02
NPHS1O60500 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
NPHS1O60500 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
NPHS1O60500 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
NPHS1O60500 AC080100.1-201ENST00000624239 5356 ntBASIC2.44□□□□□ -2.02
NPHS1O60500 SNORA67.1-201ENST00000364749 141 ntBASIC2.44□□□□□ -2.02
NPHS1O60500 Y_RNA.336-201ENST00000365307 109 ntBASIC2.44□□□□□ -2.02
NPHS1O60500 Y_RNA.547-201ENST00000384654 119 ntBASIC2.44□□□□□ -2.02
NPHS1O60500 SNORA48.2-201ENST00000390926 124 ntBASIC2.44□□□□□ -2.02
NPHS1O60500 AC114811.1-201ENST00000507207 168 ntBASIC2.44□□□□□ -2.02
NPHS1O60500 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.44□□□□□ -2.02
NPHS1O60500 SNORD33.1-201ENST00000516213 88 ntBASIC2.44□□□□□ -2.02
NPHS1O60500 SNORA31.15-201ENST00000516771 132 ntBASIC2.44□□□□□ -2.02
NPHS1O60500 IGKV1-22-201ENST00000524313 326 ntBASIC2.44□□□□□ -2.02
NPHS1O60500 MIR5197-201ENST00000583721 112 ntBASIC2.44□□□□□ -2.02
NPHS1O60500 AL137847.3-201ENST00000611521 109 ntBASIC2.44□□□□□ -2.02
NPHS1O60500 AC134878.1-201ENST00000619901 243 ntBASIC2.44□□□□□ -2.02
NPHS1O60500 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.44□□□□□ -2.02
NPHS1O60500 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NPHS1O60500 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NPHS1O60500 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
NPHS1O60500 AP006437.1-201ENST00000641440 3685 ntBASIC2.43□□□□□ -2.02
NPHS1O60500 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.43□□□□□ -2.02
NPHS1O60500 MIRLET7C-201ENST00000362160 84 ntBASIC2.43□□□□□ -2.02
NPHS1O60500 MIR128-1-201ENST00000384921 82 ntBASIC2.43□□□□□ -2.02
NPHS1O60500 MIR524-201ENST00000385242 87 ntBASIC2.43□□□□□ -2.02
NPHS1O60500 HMGN2P39-201ENST00000398005 273 ntBASIC2.43□□□□□ -2.02
NPHS1O60500 Z92545.1-201ENST00000411782 234 ntBASIC2.43□□□□□ -2.02
NPHS1O60500 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.43□□□□□ -2.02
NPHS1O60500 AL021397.1-201ENST00000451806 248 ntBASIC2.43□□□□□ -2.02
NPHS1O60500 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.43□□□□□ -2.02
NPHS1O60500 RN7SKP19-201ENST00000516016 252 ntBASIC2.43□□□□□ -2.02
NPHS1O60500 AC007336.1-201ENST00000576365 3828 ntBASIC2.43□□□□□ -2.02
NPHS1O60500 SNORD14A-201ENST00000606526 91 ntBASIC2.43□□□□□ -2.02
NPHS1O60500 U6.95-201ENST00000636931 70 ntBASIC2.43□□□□□ -2.02
NPHS1O60500 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.43□□□□□ -2.02
NPHS1O60500 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
NPHS1O60500 Y_RNA.37-201ENST00000362606 108 ntBASIC2.42□□□□□ -2.02
NPHS1O60500 SNORD115-28-201ENST00000363931 81 ntBASIC2.42□□□□□ -2.02
NPHS1O60500 SNORA4.2-201ENST00000365313 147 ntBASIC2.42□□□□□ -2.02
NPHS1O60500 RNU6-163P-201ENST00000384396 106 ntBASIC2.42□□□□□ -2.02
NPHS1O60500 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
NPHS1O60500 AC105272.1-201ENST00000438604 198 ntBASIC2.42□□□□□ -2.02
NPHS1O60500 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.42□□□□□ -2.02
NPHS1O60500 MIR3200-201ENST00000580767 85 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms