Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 RNU6-1209P-201ENST00000363655 107 ntBASIC1.33□□□□□ -2.2
CMTM3Q96MX0 Y_RNA.336-201ENST00000365307 109 ntBASIC1.33□□□□□ -2.2
CMTM3Q96MX0 snoU13.26-201ENST00000459452 105 ntBASIC1.33□□□□□ -2.2
CMTM3Q96MX0 SNORA25.15-201ENST00000516487 89 ntBASIC1.33□□□□□ -2.2
CMTM3Q96MX0 RNU6-295P-201ENST00000516901 104 ntBASIC1.33□□□□□ -2.2
CMTM3Q96MX0 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.33□□□□□ -2.2
CMTM3Q96MX0 AC008269.2-201ENST00000561915 1105 ntBASIC1.33□□□□□ -2.2
CMTM3Q96MX0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.33□□□□□ -2.2
CMTM3Q96MX0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.33□□□□□ -2.2
CMTM3Q96MX0 AC087685.1-201ENST00000587507 141 ntBASIC1.33□□□□□ -2.2
CMTM3Q96MX0 AC134026.1-201ENST00000623249 2239 ntBASIC1.33□□□□□ -2.2
CMTM3Q96MX0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CMTM3Q96MX0 Y_RNA.796-201ENST00000364268 102 ntBASIC1.32□□□□□ -2.2
CMTM3Q96MX0 Y_RNA.799-201ENST00000364992 102 ntBASIC1.32□□□□□ -2.2
CMTM3Q96MX0 RNU6-763P-201ENST00000390865 106 ntBASIC1.32□□□□□ -2.2
CMTM3Q96MX0 MTCO2P33-201ENST00000402100 465 ntBASIC1.32□□□□□ -2.2
CMTM3Q96MX0 RNU6-1054P-201ENST00000411293 104 ntBASIC1.32□□□□□ -2.2
CMTM3Q96MX0 RN7SL429P-201ENST00000479090 223 ntBASIC1.32□□□□□ -2.2
CMTM3Q96MX0 RN7SL489P-201ENST00000486185 223 ntBASIC1.32□□□□□ -2.2
CMTM3Q96MX0 RN7SL327P-201ENST00000488659 223 ntBASIC1.32□□□□□ -2.2
CMTM3Q96MX0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.32□□□□□ -2.2
CMTM3Q96MX0 RNU1-41P-201ENST00000516161 162 ntBASIC1.32□□□□□ -2.2
CMTM3Q96MX0 RNU6-947P-201ENST00000516264 106 ntBASIC1.32□□□□□ -2.2
CMTM3Q96MX0 RNU1-48P-201ENST00000516400 162 ntBASIC1.32□□□□□ -2.2
CMTM3Q96MX0 AP003072.1-201ENST00000531740 145 ntBASIC1.32□□□□□ -2.2
CMTM3Q96MX0 MIR3945-201ENST00000581853 98 ntBASIC1.32□□□□□ -2.2
CMTM3Q96MX0 AC005357.1-201ENST00000588399 301 ntBASIC1.32□□□□□ -2.2
CMTM3Q96MX0 RN7SL853P-201ENST00000617250 223 ntBASIC1.32□□□□□ -2.2
CMTM3Q96MX0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CMTM3Q96MX0 SNORA25.1-201ENST00000362326 128 ntBASIC1.31□□□□□ -2.2
CMTM3Q96MX0 RNU6-144P-201ENST00000383951 107 ntBASIC1.31□□□□□ -2.2
CMTM3Q96MX0 RNU6-514P-201ENST00000384208 107 ntBASIC1.31□□□□□ -2.2
CMTM3Q96MX0 MIR136-201ENST00000385207 82 ntBASIC1.31□□□□□ -2.2
CMTM3Q96MX0 MIR618-201ENST00000385287 98 ntBASIC1.31□□□□□ -2.2
CMTM3Q96MX0 RPL39P39-201ENST00000455840 151 ntBASIC1.31□□□□□ -2.2
CMTM3Q96MX0 snoU13.15-201ENST00000459407 104 ntBASIC1.31□□□□□ -2.2
CMTM3Q96MX0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.31□□□□□ -2.2
CMTM3Q96MX0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.31□□□□□ -2.2
CMTM3Q96MX0 Y_RNA.84-201ENST00000363011 104 ntBASIC1.3□□□□□ -2.2
CMTM3Q96MX0 MIR1304-201ENST00000408243 91 ntBASIC1.3□□□□□ -2.2
CMTM3Q96MX0 AC015922.2-201ENST00000435593 184 ntBASIC1.3□□□□□ -2.2
CMTM3Q96MX0 Y_RNA.637-201ENST00000459424 114 ntBASIC1.3□□□□□ -2.2
CMTM3Q96MX0 AC090142.3-201ENST00000519012 385 ntBASIC1.3□□□□□ -2.2
CMTM3Q96MX0 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CMTM3Q96MX0 AL442663.2-201ENST00000554385 511 ntBASIC1.3□□□□□ -2.2
CMTM3Q96MX0 AC019288.1-201ENST00000557918 224 ntBASIC1.3□□□□□ -2.2
CMTM3Q96MX0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.3□□□□□ -2.2
CMTM3Q96MX0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CMTM3Q96MX0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CMTM3Q96MX0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CMTM3Q96MX0 SNORD14E-201ENST00000364009 85 ntBASIC1.29□□□□□ -2.2
CMTM3Q96MX0 Y_RNA.326-201ENST00000365176 113 ntBASIC1.29□□□□□ -2.2
CMTM3Q96MX0 MIR517C-201ENST00000385103 95 ntBASIC1.29□□□□□ -2.2
CMTM3Q96MX0 MIR516B2-201ENST00000385190 85 ntBASIC1.29□□□□□ -2.2
CMTM3Q96MX0 RNU6-1109P-201ENST00000391187 107 ntBASIC1.29□□□□□ -2.2
CMTM3Q96MX0 NDUFA4P2-201ENST00000489989 244 ntBASIC1.29□□□□□ -2.2
CMTM3Q96MX0 AC091959.1-201ENST00000495857 238 ntBASIC1.29□□□□□ -2.2
CMTM3Q96MX0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.29□□□□□ -2.2
CMTM3Q96MX0 RNU6-1007P-201ENST00000516586 107 ntBASIC1.29□□□□□ -2.2
CMTM3Q96MX0 SNORA27.4-201ENST00000516650 95 ntBASIC1.29□□□□□ -2.2
CMTM3Q96MX0 RNU6-548P-201ENST00000517083 115 ntBASIC1.29□□□□□ -2.2
CMTM3Q96MX0 RPL23AP91-201ENST00000569211 455 ntBASIC1.29□□□□□ -2.2
CMTM3Q96MX0 AC006504.6-201ENST00000590142 199 ntBASIC1.29□□□□□ -2.2
CMTM3Q96MX0 BX248123.2-201ENST00000606318 124 ntBASIC1.29□□□□□ -2.2
CMTM3Q96MX0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
CMTM3Q96MX0 AC013791.1-201ENST00000616619 62 ntBASIC1.29□□□□□ -2.2
CMTM3Q96MX0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.28□□□□□ -2.2
CMTM3Q96MX0 RNU6-1272P-201ENST00000362776 107 ntBASIC1.28□□□□□ -2.2
CMTM3Q96MX0 RNU6-1205P-201ENST00000363625 106 ntBASIC1.28□□□□□ -2.2
CMTM3Q96MX0 SNORA25.8-201ENST00000364831 128 ntBASIC1.28□□□□□ -2.2
CMTM3Q96MX0 MIR15B-201ENST00000385045 98 ntBASIC1.28□□□□□ -2.2
CMTM3Q96MX0 U8.13-201ENST00000390842 128 ntBASIC1.28□□□□□ -2.2
CMTM3Q96MX0 SNORA26.9-201ENST00000391322 122 ntBASIC1.28□□□□□ -2.2
CMTM3Q96MX0 MIR1261-201ENST00000408659 82 ntBASIC1.28□□□□□ -2.2
CMTM3Q96MX0 MIR1278-201ENST00000408753 81 ntBASIC1.28□□□□□ -2.2
CMTM3Q96MX0 AC113618.1-201ENST00000416747 285 ntBASIC1.28□□□□□ -2.2
CMTM3Q96MX0 AC245047.7-201ENST00000440265 293 ntBASIC1.28□□□□□ -2.2
CMTM3Q96MX0 AC048334.1-201ENST00000477975 159 ntBASIC1.28□□□□□ -2.2
CMTM3Q96MX0 SNORA31.2-201ENST00000516019 134 ntBASIC1.28□□□□□ -2.2
CMTM3Q96MX0 SNORA31.4-201ENST00000516049 129 ntBASIC1.28□□□□□ -2.2
CMTM3Q96MX0 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.28□□□□□ -2.2
CMTM3Q96MX0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
CMTM3Q96MX0 Y_RNA.16-201ENST00000362421 102 ntBASIC1.27□□□□□ -2.21
CMTM3Q96MX0 U8.1-201ENST00000362843 134 ntBASIC1.27□□□□□ -2.21
CMTM3Q96MX0 SNORA70.7-201ENST00000384159 133 ntBASIC1.27□□□□□ -2.21
CMTM3Q96MX0 SNORA25-201ENST00000384384 134 ntBASIC1.27□□□□□ -2.21
CMTM3Q96MX0 RNU6-1203P-201ENST00000410703 110 ntBASIC1.27□□□□□ -2.21
CMTM3Q96MX0 SERF1AP1-201ENST00000514575 187 ntBASIC1.27□□□□□ -2.21
CMTM3Q96MX0 SNORA74.3-201ENST00000517108 154 ntBASIC1.27□□□□□ -2.21
CMTM3Q96MX0 MIR6845-201ENST00000613182 61 ntBASIC1.27□□□□□ -2.21
CMTM3Q96MX0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.26□□□□□ -2.21
CMTM3Q96MX0 SNORA63-201ENST00000363450 132 ntBASIC1.26□□□□□ -2.21
CMTM3Q96MX0 RNU6-442P-201ENST00000383968 104 ntBASIC1.26□□□□□ -2.21
CMTM3Q96MX0 RNU6-1160P-201ENST00000384546 104 ntBASIC1.26□□□□□ -2.21
CMTM3Q96MX0 SNORA11.2-201ENST00000408318 127 ntBASIC1.26□□□□□ -2.21
CMTM3Q96MX0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.26□□□□□ -2.21
CMTM3Q96MX0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.26□□□□□ -2.21
CMTM3Q96MX0 MTND5P22-201ENST00000458380 195 ntBASIC1.26□□□□□ -2.21
CMTM3Q96MX0 RNU6-1338P-201ENST00000516328 91 ntBASIC1.26□□□□□ -2.21
CMTM3Q96MX0 SNORD111.1-201ENST00000516421 86 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 205.8 ms