Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 MIR6079-201ENST00000635807 62 ntBASIC2.5□□□□□ -2.01
RTF1Q92541 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RTF1Q92541 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RTF1Q92541 Y_RNA.203-201ENST00000364106 102 ntBASIC2.49□□□□□ -2.01
RTF1Q92541 RNY3P5-201ENST00000384127 102 ntBASIC2.49□□□□□ -2.01
RTF1Q92541 RNA5SP338-201ENST00000410495 85 ntBASIC2.49□□□□□ -2.01
RTF1Q92541 RN7SKP101-201ENST00000411376 320 ntBASIC2.49□□□□□ -2.01
RTF1Q92541 BX510359.4-201ENST00000423750 193 ntBASIC2.49□□□□□ -2.01
RTF1Q92541 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.49□□□□□ -2.01
RTF1Q92541 RNU6-717P-201ENST00000459076 104 ntBASIC2.49□□□□□ -2.01
RTF1Q92541 AC091021.1-201ENST00000468051 388 ntBASIC2.49□□□□□ -2.01
RTF1Q92541 RNU6-237P-201ENST00000515985 71 ntBASIC2.49□□□□□ -2.01
RTF1Q92541 RNU6-341P-201ENST00000516973 96 ntBASIC2.49□□□□□ -2.01
RTF1Q92541 AL358944.1-201ENST00000528537 144 ntBASIC2.49□□□□□ -2.01
RTF1Q92541 AL929325.1-201ENST00000603096 117 ntBASIC2.49□□□□□ -2.01
RTF1Q92541 AC108706.1-201ENST00000611053 297 ntBASIC2.49□□□□□ -2.01
RTF1Q92541 AC022513.1-201ENST00000624512 117 ntBASIC2.49□□□□□ -2.01
RTF1Q92541 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RTF1Q92541 SNORA33-201ENST00000363664 130 ntBASIC2.48□□□□□ -2.01
RTF1Q92541 SNORA8-201ENST00000384574 139 ntBASIC2.48□□□□□ -2.01
RTF1Q92541 RNA5SP465-201ENST00000391195 109 ntBASIC2.48□□□□□ -2.01
RTF1Q92541 MIR1278-201ENST00000408753 81 ntBASIC2.48□□□□□ -2.01
RTF1Q92541 RNU6-394P-201ENST00000410735 107 ntBASIC2.48□□□□□ -2.01
RTF1Q92541 AC245047.8-201ENST00000456455 284 ntBASIC2.48□□□□□ -2.01
RTF1Q92541 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.48□□□□□ -2.01
RTF1Q92541 AC079804.2-201ENST00000490376 200 ntBASIC2.48□□□□□ -2.01
RTF1Q92541 RNU6-453P-201ENST00000516819 85 ntBASIC2.48□□□□□ -2.01
RTF1Q92541 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.48□□□□□ -2.01
RTF1Q92541 AL021707.8-201ENST00000609428 183 ntBASIC2.48□□□□□ -2.01
RTF1Q92541 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
RTF1Q92541 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.48□□□□□ -2.01
RTF1Q92541 RNU4-41P-201ENST00000364426 143 ntBASIC2.47□□□□□ -2.01
RTF1Q92541 MIR518A2-201ENST00000384966 87 ntBASIC2.47□□□□□ -2.01
RTF1Q92541 HMGN2P39-201ENST00000398005 273 ntBASIC2.47□□□□□ -2.01
RTF1Q92541 RNU6-1135P-201ENST00000411083 103 ntBASIC2.47□□□□□ -2.01
RTF1Q92541 HMGN2P23-201ENST00000456759 269 ntBASIC2.47□□□□□ -2.01
RTF1Q92541 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.47□□□□□ -2.01
RTF1Q92541 RNU6-1007P-201ENST00000516586 107 ntBASIC2.47□□□□□ -2.01
RTF1Q92541 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
RTF1Q92541 SNORA3A-201ENST00000364113 130 ntBASIC2.46□□□□□ -2.02
RTF1Q92541 AL606845.1-201ENST00000404881 255 ntBASIC2.46□□□□□ -2.02
RTF1Q92541 MIR548M-201ENST00000408260 86 ntBASIC2.46□□□□□ -2.02
RTF1Q92541 MIR1283-2-201ENST00000408621 87 ntBASIC2.46□□□□□ -2.02
RTF1Q92541 RNU5E-9P-201ENST00000411164 104 ntBASIC2.46□□□□□ -2.02
RTF1Q92541 AC003989.2-201ENST00000440224 169 ntBASIC2.46□□□□□ -2.02
RTF1Q92541 AL163195.1-201ENST00000496941 348 ntBASIC2.46□□□□□ -2.02
RTF1Q92541 RPL23AP63-201ENST00000498752 471 ntBASIC2.46□□□□□ -2.02
RTF1Q92541 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.46□□□□□ -2.02
RTF1Q92541 AC109810.1-201ENST00000534066 224 ntBASIC2.46□□□□□ -2.02
RTF1Q92541 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.46□□□□□ -2.02
RTF1Q92541 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.46□□□□□ -2.02
RTF1Q92541 RNU11-3P-201ENST00000391111 133 ntBASIC2.45□□□□□ -2.02
RTF1Q92541 SNORD23.1-201ENST00000408212 104 ntBASIC2.45□□□□□ -2.02
RTF1Q92541 CYCSP49-201ENST00000420810 319 ntBASIC2.45□□□□□ -2.02
RTF1Q92541 RNU6-255P-201ENST00000516957 105 ntBASIC2.45□□□□□ -2.02
RTF1Q92541 MIR4431-201ENST00000579990 94 ntBASIC2.45□□□□□ -2.02
RTF1Q92541 RNU4-84P-201ENST00000364200 139 ntBASIC2.44□□□□□ -2.02
RTF1Q92541 RNA5SP138-201ENST00000365098 114 ntBASIC2.44□□□□□ -2.02
RTF1Q92541 Y_RNA.357-201ENST00000365487 109 ntBASIC2.44□□□□□ -2.02
RTF1Q92541 RNU4-52P-201ENST00000384209 138 ntBASIC2.44□□□□□ -2.02
RTF1Q92541 MT-TT-201ENST00000387460 66 ntBASIC2.44□□□□□ -2.02
RTF1Q92541 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.44□□□□□ -2.02
RTF1Q92541 RPS27P21-201ENST00000486977 252 ntBASIC2.44□□□□□ -2.02
RTF1Q92541 MIR3144-201ENST00000579460 79 ntBASIC2.44□□□□□ -2.02
RTF1Q92541 AC069114.2-201ENST00000604699 304 ntBASIC2.44□□□□□ -2.02
RTF1Q92541 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.44□□□□□ -2.02
RTF1Q92541 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
RTF1Q92541 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
RTF1Q92541 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
RTF1Q92541 Y_RNA.796-201ENST00000364268 102 ntBASIC2.43□□□□□ -2.02
RTF1Q92541 RNU6-1019P-201ENST00000364424 107 ntBASIC2.43□□□□□ -2.02
RTF1Q92541 Y_RNA.272-201ENST00000364696 102 ntBASIC2.43□□□□□ -2.02
RTF1Q92541 Y_RNA.799-201ENST00000364992 102 ntBASIC2.43□□□□□ -2.02
RTF1Q92541 RNU6-728P-201ENST00000365375 104 ntBASIC2.43□□□□□ -2.02
RTF1Q92541 RNU6-746P-201ENST00000384112 109 ntBASIC2.43□□□□□ -2.02
RTF1Q92541 Y_RNA.580-201ENST00000391004 95 ntBASIC2.43□□□□□ -2.02
RTF1Q92541 RNA5SP270-201ENST00000411361 118 ntBASIC2.43□□□□□ -2.02
RTF1Q92541 SEPT7P4-201ENST00000437076 306 ntBASIC2.43□□□□□ -2.02
RTF1Q92541 AC023449.1-201ENST00000454464 154 ntBASIC2.43□□□□□ -2.02
RTF1Q92541 AC233266.1-201ENST00000454518 96 ntBASIC2.43□□□□□ -2.02
RTF1Q92541 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.43□□□□□ -2.02
RTF1Q92541 RNU6-1291P-201ENST00000516591 104 ntBASIC2.43□□□□□ -2.02
RTF1Q92541 AP002004.2-201ENST00000531656 154 ntBASIC2.43□□□□□ -2.02
RTF1Q92541 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.43□□□□□ -2.02
RTF1Q92541 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.43□□□□□ -2.02
RTF1Q92541 AC242852.1-201ENST00000612151 96 ntBASIC2.43□□□□□ -2.02
RTF1Q92541 AL353997.5-201ENST00000618886 171 ntBASIC2.43□□□□□ -2.02
RTF1Q92541 AC244015.1-201ENST00000622301 99 ntBASIC2.43□□□□□ -2.02
RTF1Q92541 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RTF1Q92541 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.42□□□□□ -2.02
RTF1Q92541 RNU6-1209P-201ENST00000363655 107 ntBASIC2.42□□□□□ -2.02
RTF1Q92541 RNA5SP99-201ENST00000364020 114 ntBASIC2.42□□□□□ -2.02
RTF1Q92541 Y_RNA.267-201ENST00000364679 109 ntBASIC2.42□□□□□ -2.02
RTF1Q92541 MIR597-201ENST00000384968 97 ntBASIC2.42□□□□□ -2.02
RTF1Q92541 RNU6-482P-201ENST00000391068 107 ntBASIC2.42□□□□□ -2.02
RTF1Q92541 RNU4-43P-201ENST00000410628 137 ntBASIC2.42□□□□□ -2.02
RTF1Q92541 Y_RNA.621-201ENST00000411065 96 ntBASIC2.42□□□□□ -2.02
RTF1Q92541 RNU2-55P-201ENST00000411146 174 ntBASIC2.42□□□□□ -2.02
RTF1Q92541 AC069257.2-201ENST00000441819 155 ntBASIC2.42□□□□□ -2.02
RTF1Q92541 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 292.1 ms