Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 RNU6-900P-201ENST00000384498 102 ntBASIC-1.64□□□□□ -2.67
POLR1AO95602 AC244505.6-201ENST00000452829 130 ntBASIC-1.64□□□□□ -2.67
POLR1AO95602 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.64□□□□□ -2.67
POLR1AO95602 MTND5P34-201ENST00000568888 325 ntBASIC-1.64□□□□□ -2.67
POLR1AO95602 MTND4LP25-201ENST00000570218 163 ntBASIC-1.64□□□□□ -2.67
POLR1AO95602 RNU6-88P-201ENST00000606801 100 ntBASIC-1.64□□□□□ -2.67
POLR1AO95602 SNORD87-201ENST00000364849 89 ntBASIC-1.65□□□□□ -2.67
POLR1AO95602 RNU6-407P-201ENST00000365280 104 ntBASIC-1.65□□□□□ -2.67
POLR1AO95602 RNU6-926P-201ENST00000384075 107 ntBASIC-1.65□□□□□ -2.67
POLR1AO95602 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.65□□□□□ -2.67
POLR1AO95602 MIR588-201ENST00000384900 83 ntBASIC-1.65□□□□□ -2.67
POLR1AO95602 MTCYBP4-201ENST00000401524 249 ntBASIC-1.65□□□□□ -2.67
POLR1AO95602 AC016907.1-201ENST00000419483 435 ntBASIC-1.65□□□□□ -2.67
POLR1AO95602 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.65□□□□□ -2.67
POLR1AO95602 AC079140.5-201ENST00000507882 310 ntBASIC-1.65□□□□□ -2.67
POLR1AO95602 SNORA25.13-201ENST00000516395 103 ntBASIC-1.65□□□□□ -2.67
POLR1AO95602 RNU6-1198P-201ENST00000516904 67 ntBASIC-1.65□□□□□ -2.67
POLR1AO95602 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-1.65□□□□□ -2.67
POLR1AO95602 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.65□□□□□ -2.67
POLR1AO95602 MIR4520-1-201ENST00000582609 70 ntBASIC-1.65□□□□□ -2.67
POLR1AO95602 MIR8055-201ENST00000610739 97 ntBASIC-1.65□□□□□ -2.67
POLR1AO95602 AC013437.2-201ENST00000639587 677 ntBASIC-1.65□□□□□ -2.67
POLR1AO95602 RNU6-880P-201ENST00000384526 107 ntBASIC-1.66□□□□□ -2.67
POLR1AO95602 RNU6-136P-201ENST00000384663 107 ntBASIC-1.66□□□□□ -2.67
POLR1AO95602 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.66□□□□□ -2.67
POLR1AO95602 AF186996.7-201ENST00000492781 209 ntBASIC-1.66□□□□□ -2.67
POLR1AO95602 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.66□□□□□ -2.67
POLR1AO95602 AC107934.1-201ENST00000522215 217 ntBASIC-1.66□□□□□ -2.67
POLR1AO95602 AC068587.4-201ENST00000533893 186 ntBASIC-1.66□□□□□ -2.67
POLR1AO95602 AC073648.5-201ENST00000603502 305 ntBASIC-1.66□□□□□ -2.67
POLR1AO95602 AC091965.4-201ENST00000607691 587 ntBASIC-1.66□□□□□ -2.67
POLR1AO95602 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.66□□□□□ -2.68
POLR1AO95602 RNU6-61P-201ENST00000365528 109 ntBASIC-1.66□□□□□ -2.68
POLR1AO95602 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.66□□□□□ -2.68
POLR1AO95602 AC108729.2-201ENST00000476543 840 ntBASIC-1.66□□□□□ -2.68
POLR1AO95602 SNORA25.14-201ENST00000516481 132 ntBASIC-1.66□□□□□ -2.68
POLR1AO95602 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-1.66□□□□□ -2.68
POLR1AO95602 AC005776.1-201ENST00000603164 290 ntBASIC-1.66□□□□□ -2.68
POLR1AO95602 AL133255.1-201ENST00000606374 441 ntBASIC-1.66□□□□□ -2.68
POLR1AO95602 MIR6082-201ENST00000613604 109 ntBASIC-1.66□□□□□ -2.68
POLR1AO95602 AC132825.6-201ENST00000638861 357 ntBASIC-1.66□□□□□ -2.68
POLR1AO95602 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.67□□□□□ -2.68
POLR1AO95602 RNU6-462P-201ENST00000362659 105 ntBASIC-1.67□□□□□ -2.68
POLR1AO95602 RNU6-827P-201ENST00000365553 106 ntBASIC-1.67□□□□□ -2.68
POLR1AO95602 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.67□□□□□ -2.68
POLR1AO95602 MTATP6P17-201ENST00000431030 672 ntBASIC-1.67□□□□□ -2.68
POLR1AO95602 MTCO2P11-201ENST00000431069 680 ntBASIC-1.67□□□□□ -2.68
POLR1AO95602 GMFBP1-201ENST00000467831 427 ntBASIC-1.67□□□□□ -2.68
POLR1AO95602 RNU2-13P-201ENST00000515909 113 ntBASIC-1.67□□□□□ -2.68
POLR1AO95602 RNU6-403P-201ENST00000363163 104 ntBASIC-1.68□□□□□ -2.68
POLR1AO95602 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.68□□□□□ -2.68
POLR1AO95602 RPL39P25-201ENST00000449384 154 ntBASIC-1.68□□□□□ -2.68
POLR1AO95602 HIF1AP1-201ENST00000553642 175 ntBASIC-1.68□□□□□ -2.68
POLR1AO95602 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.69□□□□□ -2.68
POLR1AO95602 MIR522-201ENST00000385071 87 ntBASIC-1.69□□□□□ -2.68
POLR1AO95602 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.69□□□□□ -2.68
POLR1AO95602 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-1.69□□□□□ -2.68
POLR1AO95602 RNU6-479P-201ENST00000516348 105 ntBASIC-1.69□□□□□ -2.68
POLR1AO95602 RNU6-830P-201ENST00000516353 107 ntBASIC-1.69□□□□□ -2.68
POLR1AO95602 RNU7-188P-201ENST00000517063 64 ntBASIC-1.69□□□□□ -2.68
POLR1AO95602 MIR4491-201ENST00000581087 68 ntBASIC-1.69□□□□□ -2.68
POLR1AO95602 MIR8066-201ENST00000617280 78 ntBASIC-1.69□□□□□ -2.68
POLR1AO95602 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.69□□□□□ -2.68
POLR1AO95602 MIR527-201ENST00000385244 85 ntBASIC-1.69□□□□□ -2.68
POLR1AO95602 HMGN2P32-201ENST00000444648 269 ntBASIC-1.69□□□□□ -2.68
POLR1AO95602 MTCO2P6-201ENST00000463134 685 ntBASIC-1.69□□□□□ -2.68
POLR1AO95602 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.69□□□□□ -2.68
POLR1AO95602 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-1.69□□□□□ -2.68
POLR1AO95602 SNORA20B-201ENST00000384220 132 ntBASIC-1.7□□□□□ -2.68
POLR1AO95602 RNU6-540P-201ENST00000384622 101 ntBASIC-1.7□□□□□ -2.68
POLR1AO95602 MIR181B2-201ENST00000385004 89 ntBASIC-1.7□□□□□ -2.68
POLR1AO95602 RNU6-602P-201ENST00000411155 105 ntBASIC-1.7□□□□□ -2.68
POLR1AO95602 RNU6-387P-201ENST00000411331 105 ntBASIC-1.7□□□□□ -2.68
POLR1AO95602 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-1.7□□□□□ -2.68
POLR1AO95602 RNU6-765P-201ENST00000516916 99 ntBASIC-1.7□□□□□ -2.68
POLR1AO95602 RNU7-181P-201ENST00000517234 74 ntBASIC-1.7□□□□□ -2.68
POLR1AO95602 DEFB131E-201ENST00000532329 154 ntBASIC-1.7□□□□□ -2.68
POLR1AO95602 AL445584.3-201ENST00000617173 78 ntBASIC-1.7□□□□□ -2.68
POLR1AO95602 AC139792.3-201ENST00000623525 224 ntBASIC-1.7□□□□□ -2.68
POLR1AO95602 AC127459.3-201ENST00000624328 466 ntBASIC-1.7□□□□□ -2.68
POLR1AO95602 AC126544.2-201ENST00000625174 749 ntBASIC-1.7□□□□□ -2.68
POLR1AO95602 RNU6-131P-201ENST00000391144 107 ntBASIC-1.71□□□□□ -2.68
POLR1AO95602 RNU6-1001P-201ENST00000411265 100 ntBASIC-1.71□□□□□ -2.68
POLR1AO95602 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-1.71□□□□□ -2.68
POLR1AO95602 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-1.71□□□□□ -2.68
POLR1AO95602 RNU6-983P-201ENST00000516004 103 ntBASIC-1.71□□□□□ -2.68
POLR1AO95602 RNU6-287P-201ENST00000516230 98 ntBASIC-1.71□□□□□ -2.68
POLR1AO95602 AL158050.2-201ENST00000605336 568 ntBASIC-1.71□□□□□ -2.68
POLR1AO95602 AC074085.1-201ENST00000413598 418 ntBASIC-1.71□□□□□ -2.68
POLR1AO95602 AC236972.2-201ENST00000434979 310 ntBASIC-1.71□□□□□ -2.68
POLR1AO95602 AC010655.3-201ENST00000478818 450 ntBASIC-1.71□□□□□ -2.68
POLR1AO95602 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.71□□□□□ -2.68
POLR1AO95602 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-1.71□□□□□ -2.68
POLR1AO95602 MIR4423-201ENST00000580922 80 ntBASIC-1.71□□□□□ -2.68
POLR1AO95602 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.72□□□□□ -2.69
POLR1AO95602 MIR889-201ENST00000401280 79 ntBASIC-1.72□□□□□ -2.69
POLR1AO95602 AL117351.1-201ENST00000438864 766 ntBASIC-1.72□□□□□ -2.69
POLR1AO95602 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.72□□□□□ -2.69
POLR1AO95602 RNU6-175P-201ENST00000516896 107 ntBASIC-1.72□□□□□ -2.69
POLR1AO95602 RNU6-201P-201ENST00000517100 61 ntBASIC-1.72□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 223.6 ms