Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEM56-RWDD3S4R434 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TMEM56-RWDD3S4R434 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TMEM56-RWDD3S4R434 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TMEM56-RWDD3S4R434 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.46■□□□□ 0.06
TMEM56-RWDD3S4R434 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
TMEM56-RWDD3S4R434 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 ESPNP-201ENST00000270691 2015 ntBASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 BX276092.2-201ENST00000417668 665 ntBASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
TMEM56-RWDD3S4R434 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 HEIH-201ENST00000623091 1652 ntBASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEM56-RWDD3S4R434 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TMEM56-RWDD3S4R434 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 1649 ms