Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 RNU6-165P-201ENST00000517170 99 ntBASIC0.89□□□□□ -2.27
FOXC2Q99958 AL355375.2-201ENST00000574825 175 ntBASIC0.89□□□□□ -2.27
FOXC2Q99958 MIR1273G-201ENST00000577677 100 ntBASIC0.89□□□□□ -2.27
FOXC2Q99958 LARP7P1-201ENST00000605576 316 ntBASIC0.89□□□□□ -2.27
FOXC2Q99958 AC084781.2-201ENST00000615568 161 ntBASIC0.89□□□□□ -2.27
FOXC2Q99958 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.89□□□□□ -2.27
FOXC2Q99958 MIR6079-201ENST00000635807 62 ntBASIC0.89□□□□□ -2.27
FOXC2Q99958 MIR1302-1-201ENST00000637932 143 ntBASIC0.89□□□□□ -2.27
FOXC2Q99958 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
FOXC2Q99958 RNU6-1115P-201ENST00000362490 106 ntBASIC0.88□□□□□ -2.27
FOXC2Q99958 Y_RNA.124-201ENST00000363339 93 ntBASIC0.88□□□□□ -2.27
FOXC2Q99958 RNY3P11-201ENST00000364153 102 ntBASIC0.88□□□□□ -2.27
FOXC2Q99958 RNU6-1310P-201ENST00000384153 107 ntBASIC0.88□□□□□ -2.27
FOXC2Q99958 Y_RNA.496-201ENST00000384444 101 ntBASIC0.88□□□□□ -2.27
FOXC2Q99958 Y_RNA.529-201ENST00000384586 119 ntBASIC0.88□□□□□ -2.27
FOXC2Q99958 MIR532-201ENST00000385025 91 ntBASIC0.88□□□□□ -2.27
FOXC2Q99958 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.88□□□□□ -2.27
FOXC2Q99958 MRPL35P3-201ENST00000421557 364 ntBASIC0.88□□□□□ -2.27
FOXC2Q99958 AC018865.2-201ENST00000423631 129 ntBASIC0.88□□□□□ -2.27
FOXC2Q99958 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.88□□□□□ -2.27
FOXC2Q99958 DYNLT3P2-201ENST00000442517 295 ntBASIC0.88□□□□□ -2.27
FOXC2Q99958 MTND5P20-201ENST00000448677 143 ntBASIC0.88□□□□□ -2.27
FOXC2Q99958 SUMO1P2-201ENST00000452524 304 ntBASIC0.88□□□□□ -2.27
FOXC2Q99958 RNU6-408P-201ENST00000515910 100 ntBASIC0.88□□□□□ -2.27
FOXC2Q99958 RNA5SP20-201ENST00000515976 84 ntBASIC0.88□□□□□ -2.27
FOXC2Q99958 RNU6-507P-201ENST00000516045 100 ntBASIC0.88□□□□□ -2.27
FOXC2Q99958 RNU6-341P-201ENST00000516973 96 ntBASIC0.88□□□□□ -2.27
FOXC2Q99958 RNU7-172P-201ENST00000517125 64 ntBASIC0.88□□□□□ -2.27
FOXC2Q99958 AC144568.1-201ENST00000520139 137 ntBASIC0.88□□□□□ -2.27
FOXC2Q99958 AC027419.1-201ENST00000522976 328 ntBASIC0.88□□□□□ -2.27
FOXC2Q99958 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.88□□□□□ -2.27
FOXC2Q99958 AC004467.1-201ENST00000615678 330 ntBASIC0.88□□□□□ -2.27
FOXC2Q99958 AC007742.2-201ENST00000618226 398 ntBASIC0.88□□□□□ -2.27
FOXC2Q99958 AC012676.2-201ENST00000619258 186 ntBASIC0.88□□□□□ -2.27
FOXC2Q99958 AL513423.1-201ENST00000621695 132 ntBASIC0.88□□□□□ -2.27
FOXC2Q99958 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.88□□□□□ -2.27
FOXC2Q99958 AL391516.1-201ENST00000554380 2449 ntBASIC0.88□□□□□ -2.27
FOXC2Q99958 AL442644.1-201ENST00000454390 3105 ntBASIC0.87□□□□□ -2.27
FOXC2Q99958 Y_RNA.5-201ENST00000362334 102 ntBASIC0.87□□□□□ -2.27
FOXC2Q99958 Y_RNA.101-201ENST00000363154 102 ntBASIC0.87□□□□□ -2.27
FOXC2Q99958 RNU6-708P-201ENST00000384217 107 ntBASIC0.87□□□□□ -2.27
FOXC2Q99958 RNA5SP475-201ENST00000410568 110 ntBASIC0.87□□□□□ -2.27
FOXC2Q99958 AL591704.2-201ENST00000421658 181 ntBASIC0.87□□□□□ -2.27
FOXC2Q99958 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.87□□□□□ -2.27
FOXC2Q99958 HMGN1P33-201ENST00000432945 451 ntBASIC0.87□□□□□ -2.27
FOXC2Q99958 AC099799.1-201ENST00000439809 192 ntBASIC0.87□□□□□ -2.27
FOXC2Q99958 OR9P1P-201ENST00000496431 281 ntBASIC0.87□□□□□ -2.27
FOXC2Q99958 RNU6-966P-201ENST00000516479 104 ntBASIC0.87□□□□□ -2.27
FOXC2Q99958 SNORA70.22-201ENST00000517160 124 ntBASIC0.87□□□□□ -2.27
FOXC2Q99958 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.87□□□□□ -2.27
FOXC2Q99958 MIR548S-201ENST00000581352 82 ntBASIC0.87□□□□□ -2.27
FOXC2Q99958 AL162424.1-201ENST00000602325 221 ntBASIC0.87□□□□□ -2.27
FOXC2Q99958 AL513534.2-201ENST00000603836 250 ntBASIC0.87□□□□□ -2.27
FOXC2Q99958 AL590095.2-201ENST00000604136 117 ntBASIC0.87□□□□□ -2.27
FOXC2Q99958 AC240442.1-201ENST00000616055 283 ntBASIC0.87□□□□□ -2.27
FOXC2Q99958 Y_RNA.252-201ENST00000364556 101 ntBASIC0.86□□□□□ -2.27
FOXC2Q99958 Y_RNA.384-201ENST00000383909 102 ntBASIC0.86□□□□□ -2.27
FOXC2Q99958 RNU6-1009P-201ENST00000390996 107 ntBASIC0.86□□□□□ -2.27
FOXC2Q99958 AC091021.1-201ENST00000468051 388 ntBASIC0.86□□□□□ -2.27
FOXC2Q99958 UBL5P1-201ENST00000507979 193 ntBASIC0.86□□□□□ -2.27
FOXC2Q99958 Y_RNA.702-201ENST00000516843 96 ntBASIC0.86□□□□□ -2.27
FOXC2Q99958 AC093027.1-201ENST00000546698 429 ntBASIC0.86□□□□□ -2.27
FOXC2Q99958 MIR4423-201ENST00000580922 80 ntBASIC0.86□□□□□ -2.27
FOXC2Q99958 AL360085.1-201ENST00000604713 532 ntBASIC0.86□□□□□ -2.27
FOXC2Q99958 AC133104.2-201ENST00000615272 193 ntBASIC0.86□□□□□ -2.27
FOXC2Q99958 AC010205.1-201ENST00000616668 449 ntBASIC0.86□□□□□ -2.27
FOXC2Q99958 U2.1-201ENST00000618978 145 ntBASIC0.86□□□□□ -2.27
FOXC2Q99958 AC127459.3-201ENST00000624328 466 ntBASIC0.86□□□□□ -2.27
FOXC2Q99958 MIR4272-201ENST00000635924 64 ntBASIC0.86□□□□□ -2.27
FOXC2Q99958 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
FOXC2Q99958 MIRLET7C-201ENST00000362160 84 ntBASIC0.85□□□□□ -2.27
FOXC2Q99958 Y_RNA.27-201ENST00000362540 103 ntBASIC0.85□□□□□ -2.27
FOXC2Q99958 Y_RNA.251-201ENST00000364551 99 ntBASIC0.85□□□□□ -2.27
FOXC2Q99958 Y_RNA.259-201ENST00000364619 101 ntBASIC0.85□□□□□ -2.27
FOXC2Q99958 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.85□□□□□ -2.27
FOXC2Q99958 MIR653-201ENST00000385279 96 ntBASIC0.85□□□□□ -2.27
FOXC2Q99958 AL034345.1-201ENST00000407768 123 ntBASIC0.85□□□□□ -2.27
FOXC2Q99958 RNU2-54P-201ENST00000410299 190 ntBASIC0.85□□□□□ -2.27
FOXC2Q99958 RNU2-61P-201ENST00000411069 191 ntBASIC0.85□□□□□ -2.27
FOXC2Q99958 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.85□□□□□ -2.27
FOXC2Q99958 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.85□□□□□ -2.27
FOXC2Q99958 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.85□□□□□ -2.27
FOXC2Q99958 FCF1P4-201ENST00000448326 183 ntBASIC0.85□□□□□ -2.27
FOXC2Q99958 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.85□□□□□ -2.27
FOXC2Q99958 AL358944.1-201ENST00000528537 144 ntBASIC0.85□□□□□ -2.27
FOXC2Q99958 AC023442.1-201ENST00000531247 422 ntBASIC0.85□□□□□ -2.27
FOXC2Q99958 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.85□□□□□ -2.27
FOXC2Q99958 AC073349.3-201ENST00000617616 186 ntBASIC0.85□□□□□ -2.27
FOXC2Q99958 AC112487.2-201ENST00000637950 304 ntBASIC0.85□□□□□ -2.27
FOXC2Q99958 SNORA1B-201ENST00000362535 133 ntBASIC0.84□□□□□ -2.27
FOXC2Q99958 RNU6-626P-201ENST00000363354 107 ntBASIC0.84□□□□□ -2.27
FOXC2Q99958 Y_RNA.315-201ENST00000365117 102 ntBASIC0.84□□□□□ -2.27
FOXC2Q99958 RNU6-407P-201ENST00000365280 104 ntBASIC0.84□□□□□ -2.27
FOXC2Q99958 RNU1-115P-201ENST00000365329 160 ntBASIC0.84□□□□□ -2.27
FOXC2Q99958 RNU6-20P-201ENST00000384106 107 ntBASIC0.84□□□□□ -2.27
FOXC2Q99958 RNU6-424P-201ENST00000384367 105 ntBASIC0.84□□□□□ -2.27
FOXC2Q99958 MIR19B1-201ENST00000384829 87 ntBASIC0.84□□□□□ -2.27
FOXC2Q99958 MIR660-201ENST00000385235 97 ntBASIC0.84□□□□□ -2.27
FOXC2Q99958 SNORD78.2-201ENST00000391076 69 ntBASIC0.84□□□□□ -2.27
FOXC2Q99958 RNU6-1054P-201ENST00000411293 104 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms