Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RNY4P20-201ENST00000516678 93 ntBASIC3.22□□□□□ -1.89
NFKB1P19838 RNU1-142P-201ENST00000516682 145 ntBASIC3.22□□□□□ -1.89
NFKB1P19838 AP002004.2-201ENST00000531656 154 ntBASIC3.22□□□□□ -1.89
NFKB1P19838 AC006441.5-201ENST00000612680 209 ntBASIC3.22□□□□□ -1.89
NFKB1P19838 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
NFKB1P19838 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
NFKB1P19838 MIR7-3-201ENST00000384898 110 ntBASIC3.21□□□□□ -1.9
NFKB1P19838 MIR592-201ENST00000384959 97 ntBASIC3.21□□□□□ -1.9
NFKB1P19838 MIR802-201ENST00000390235 94 ntBASIC3.21□□□□□ -1.9
NFKB1P19838 RNU2-63P-201ENST00000410792 194 ntBASIC3.21□□□□□ -1.9
NFKB1P19838 AL049830.1-201ENST00000468034 425 ntBASIC3.21□□□□□ -1.9
NFKB1P19838 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.21□□□□□ -1.9
NFKB1P19838 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.21□□□□□ -1.9
NFKB1P19838 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.2□□□□□ -1.9
NFKB1P19838 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
NFKB1P19838 RNU6-349P-201ENST00000362402 107 ntBASIC3.2□□□□□ -1.9
NFKB1P19838 RNU6-690P-201ENST00000365242 106 ntBASIC3.2□□□□□ -1.9
NFKB1P19838 SNORA2.2-201ENST00000365473 135 ntBASIC3.2□□□□□ -1.9
NFKB1P19838 RNU6-1189P-201ENST00000383958 107 ntBASIC3.2□□□□□ -1.9
NFKB1P19838 RNU6-49P-201ENST00000384256 107 ntBASIC3.2□□□□□ -1.9
NFKB1P19838 Y_RNA.558-201ENST00000384685 113 ntBASIC3.2□□□□□ -1.9
NFKB1P19838 RN7SL863P-201ENST00000462370 296 ntBASIC3.2□□□□□ -1.9
NFKB1P19838 RN7SKP43-201ENST00000516173 320 ntBASIC3.2□□□□□ -1.9
NFKB1P19838 IGKV3-31-201ENST00000523109 329 ntBASIC3.2□□□□□ -1.9
NFKB1P19838 MIR3200-201ENST00000580767 85 ntBASIC3.2□□□□□ -1.9
NFKB1P19838 AL365361.1-201ENST00000566942 3481 ntBASIC3.2□□□□□ -1.9
NFKB1P19838 ZNF720P1-201ENST00000562403 1939 ntBASIC3.2□□□□□ -1.9
NFKB1P19838 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
NFKB1P19838 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.2□□□□□ -1.9
NFKB1P19838 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
NFKB1P19838 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.19□□□□□ -1.9
NFKB1P19838 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NFKB1P19838 SNORA33-201ENST00000363664 130 ntBASIC3.19□□□□□ -1.9
NFKB1P19838 RNU6-414P-201ENST00000363705 104 ntBASIC3.19□□□□□ -1.9
NFKB1P19838 RNU6-442P-201ENST00000383968 104 ntBASIC3.19□□□□□ -1.9
NFKB1P19838 RNVU1-14-201ENST00000384770 164 ntBASIC3.19□□□□□ -1.9
NFKB1P19838 MIR491-201ENST00000384877 84 ntBASIC3.19□□□□□ -1.9
NFKB1P19838 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NFKB1P19838 RNU1-101P-201ENST00000391171 127 ntBASIC3.19□□□□□ -1.9
NFKB1P19838 RNU7-94P-201ENST00000459576 63 ntBASIC3.19□□□□□ -1.9
NFKB1P19838 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.19□□□□□ -1.9
NFKB1P19838 RNU6-667P-201ENST00000517186 102 ntBASIC3.19□□□□□ -1.9
NFKB1P19838 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.19□□□□□ -1.9
NFKB1P19838 MIR4762-201ENST00000585261 75 ntBASIC3.19□□□□□ -1.9
NFKB1P19838 MIR7112-201ENST00000616126 65 ntBASIC3.19□□□□□ -1.9
NFKB1P19838 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.19□□□□□ -1.9
NFKB1P19838 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
NFKB1P19838 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NFKB1P19838 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.18□□□□□ -1.9
NFKB1P19838 MIR561-201ENST00000385216 97 ntBASIC3.18□□□□□ -1.9
NFKB1P19838 RNU6-440P-201ENST00000390882 105 ntBASIC3.18□□□□□ -1.9
NFKB1P19838 SNORA26.2-201ENST00000390922 122 ntBASIC3.18□□□□□ -1.9
NFKB1P19838 RNY4P29-201ENST00000410801 97 ntBASIC3.18□□□□□ -1.9
NFKB1P19838 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.18□□□□□ -1.9
NFKB1P19838 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.18□□□□□ -1.9
NFKB1P19838 RN7SL601P-201ENST00000471221 293 ntBASIC3.18□□□□□ -1.9
NFKB1P19838 AC018868.1-201ENST00000491307 315 ntBASIC3.18□□□□□ -1.9
NFKB1P19838 RNU6-970P-201ENST00000516312 107 ntBASIC3.18□□□□□ -1.9
NFKB1P19838 RNU6-830P-201ENST00000516353 107 ntBASIC3.18□□□□□ -1.9
NFKB1P19838 RNU7-25P-201ENST00000516544 62 ntBASIC3.18□□□□□ -1.9
NFKB1P19838 SNORA70.24-201ENST00000517233 118 ntBASIC3.18□□□□□ -1.9
NFKB1P19838 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.18□□□□□ -1.9
NFKB1P19838 MIR5680-201ENST00000577577 84 ntBASIC3.18□□□□□ -1.9
NFKB1P19838 AL355297.2-201ENST00000604792 129 ntBASIC3.18□□□□□ -1.9
NFKB1P19838 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NFKB1P19838 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
NFKB1P19838 SNORD115-28-201ENST00000363931 81 ntBASIC3.17□□□□□ -1.9
NFKB1P19838 SNORD14E-201ENST00000364009 85 ntBASIC3.17□□□□□ -1.9
NFKB1P19838 RNA5SP72-201ENST00000364442 117 ntBASIC3.17□□□□□ -1.9
NFKB1P19838 U8.5-201ENST00000364528 136 ntBASIC3.17□□□□□ -1.9
NFKB1P19838 MIR515-2-201ENST00000384883 83 ntBASIC3.17□□□□□ -1.9
NFKB1P19838 MIR515-1-201ENST00000384884 83 ntBASIC3.17□□□□□ -1.9
NFKB1P19838 MIR759-201ENST00000390224 91 ntBASIC3.17□□□□□ -1.9
NFKB1P19838 RNA5SP323-201ENST00000391094 133 ntBASIC3.17□□□□□ -1.9
NFKB1P19838 RNA5SP120-201ENST00000410900 112 ntBASIC3.17□□□□□ -1.9
NFKB1P19838 SRIP3-201ENST00000413200 219 ntBASIC3.17□□□□□ -1.9
NFKB1P19838 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.17□□□□□ -1.9
NFKB1P19838 AC006483.1-201ENST00000487308 313 ntBASIC3.17□□□□□ -1.9
NFKB1P19838 RN7SL636P-201ENST00000497504 294 ntBASIC3.17□□□□□ -1.9
NFKB1P19838 AC245166.1-201ENST00000521012 253 ntBASIC3.17□□□□□ -1.9
NFKB1P19838 MIR5009-201ENST00000578736 100 ntBASIC3.17□□□□□ -1.9
NFKB1P19838 UBL5P2-201ENST00000583788 219 ntBASIC3.17□□□□□ -1.9
NFKB1P19838 AC021443.1-201ENST00000604478 211 ntBASIC3.17□□□□□ -1.9
NFKB1P19838 AC007179.3-201ENST00000604976 235 ntBASIC3.17□□□□□ -1.9
NFKB1P19838 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NFKB1P19838 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
NFKB1P19838 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NFKB1P19838 MIR148B-201ENST00000362252 99 ntBASIC3.16□□□□□ -1.9
NFKB1P19838 Y_RNA.37-201ENST00000362606 108 ntBASIC3.16□□□□□ -1.9
NFKB1P19838 Y_RNA.298-201ENST00000364960 107 ntBASIC3.16□□□□□ -1.9
NFKB1P19838 SNORA7.4-201ENST00000384249 137 ntBASIC3.16□□□□□ -1.9
NFKB1P19838 SNORA8-201ENST00000384574 139 ntBASIC3.16□□□□□ -1.9
NFKB1P19838 MT-TI-201ENST00000387365 69 ntBASIC3.16□□□□□ -1.9
NFKB1P19838 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.16□□□□□ -1.9
NFKB1P19838 SNRPGP14-201ENST00000435400 219 ntBASIC3.16□□□□□ -1.9
NFKB1P19838 AC099677.2-201ENST00000436385 175 ntBASIC3.16□□□□□ -1.9
NFKB1P19838 ATP5J2P3-201ENST00000451550 258 ntBASIC3.16□□□□□ -1.9
NFKB1P19838 RNU1-131P-201ENST00000458943 161 ntBASIC3.16□□□□□ -1.9
NFKB1P19838 SNORA74D-201ENST00000516404 141 ntBASIC3.16□□□□□ -1.9
NFKB1P19838 RNU6-762P-201ENST00000517107 102 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 765 ms