Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SOX1O00570 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.18□□□□□ -1.9
SOX1O00570 SNORA68.1-201ENST00000364537 132 ntBASIC3.18□□□□□ -1.9
SOX1O00570 CD24P4-201ENST00000382840 243 ntBASIC3.18□□□□□ -1.9
SOX1O00570 SNORA1-201ENST00000384107 130 ntBASIC3.18□□□□□ -1.9
SOX1O00570 AC002075.2-201ENST00000425207 252 ntBASIC3.18□□□□□ -1.9
SOX1O00570 SNRPGP10-201ENST00000432323 225 ntBASIC3.18□□□□□ -1.9
SOX1O00570 AC233266.1-201ENST00000454518 96 ntBASIC3.18□□□□□ -1.9
SOX1O00570 MRPS17P9-201ENST00000511924 393 ntBASIC3.18□□□□□ -1.9
SOX1O00570 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.18□□□□□ -1.9
SOX1O00570 AC242852.1-201ENST00000612151 96 ntBASIC3.18□□□□□ -1.9
SOX1O00570 AC244015.1-201ENST00000622301 99 ntBASIC3.18□□□□□ -1.9
SOX1O00570 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SOX1O00570 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SOX1O00570 AC018630.2-201ENST00000534866 2403 ntBASIC3.17□□□□□ -1.9
SOX1O00570 AC009487.2-201ENST00000420969 6821 ntBASIC3.17□□□□□ -1.9
SOX1O00570 MIR340-201ENST00000362125 95 ntBASIC3.17□□□□□ -1.9
SOX1O00570 RNU6-859P-201ENST00000362728 107 ntBASIC3.17□□□□□ -1.9
SOX1O00570 SNORD24-201ENST00000383884 75 ntBASIC3.17□□□□□ -1.9
SOX1O00570 RN7SKP192-201ENST00000411291 327 ntBASIC3.17□□□□□ -1.9
SOX1O00570 AC244505.4-201ENST00000434905 287 ntBASIC3.17□□□□□ -1.9
SOX1O00570 SSXP5-201ENST00000443473 287 ntBASIC3.17□□□□□ -1.9
SOX1O00570 RN7SL330P-201ENST00000469709 307 ntBASIC3.17□□□□□ -1.9
SOX1O00570 AC011406.1-201ENST00000512440 370 ntBASIC3.17□□□□□ -1.9
SOX1O00570 AC096725.1-201ENST00000514266 313 ntBASIC3.17□□□□□ -1.9
SOX1O00570 SNORA48.11-201ENST00000517015 89 ntBASIC3.17□□□□□ -1.9
SOX1O00570 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.17□□□□□ -1.9
SOX1O00570 U7.8-201ENST00000619968 63 ntBASIC3.17□□□□□ -1.9
SOX1O00570 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SOX1O00570 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SOX1O00570 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SOX1O00570 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SOX1O00570 snoU2-30.2-201ENST00000362805 70 ntBASIC3.16□□□□□ -1.9
SOX1O00570 RNU1-23P-201ENST00000363361 144 ntBASIC3.16□□□□□ -1.9
SOX1O00570 SNORD61-201ENST00000384252 73 ntBASIC3.16□□□□□ -1.9
SOX1O00570 RNU1-101P-201ENST00000391171 127 ntBASIC3.16□□□□□ -1.9
SOX1O00570 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.16□□□□□ -1.9
SOX1O00570 RNU2-48P-201ENST00000410694 191 ntBASIC3.16□□□□□ -1.9
SOX1O00570 HMGN2P3-201ENST00000433603 273 ntBASIC3.16□□□□□ -1.9
SOX1O00570 HMGN2P5-201ENST00000436882 273 ntBASIC3.16□□□□□ -1.9
SOX1O00570 RNA5SP236-201ENST00000516169 116 ntBASIC3.16□□□□□ -1.9
SOX1O00570 RNU6-113P-201ENST00000516653 101 ntBASIC3.16□□□□□ -1.9
SOX1O00570 Y_RNA.694-201ENST00000516677 117 ntBASIC3.16□□□□□ -1.9
SOX1O00570 AL358944.1-201ENST00000528537 144 ntBASIC3.16□□□□□ -1.9
SOX1O00570 AC006254.2-201ENST00000603259 279 ntBASIC3.16□□□□□ -1.9
SOX1O00570 AL353997.5-201ENST00000618886 171 ntBASIC3.16□□□□□ -1.9
SOX1O00570 MIR4679-1-201ENST00000637619 75 ntBASIC3.16□□□□□ -1.9
SOX1O00570 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SOX1O00570 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SOX1O00570 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.16□□□□□ -1.9
SOX1O00570 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SOX1O00570 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SOX1O00570 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.16□□□□□ -1.9
SOX1O00570 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SOX1O00570 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SOX1O00570 AC017071.1-201ENST00000564407 2204 ntBASIC3.15□□□□□ -1.9
SOX1O00570 AC073325.2-201ENST00000339545 159 ntBASIC3.15□□□□□ -1.91
SOX1O00570 RNU6-888P-201ENST00000363010 101 ntBASIC3.15□□□□□ -1.91
SOX1O00570 Y_RNA.253-201ENST00000364562 112 ntBASIC3.15□□□□□ -1.91
SOX1O00570 Y_RNA.508-201ENST00000384502 114 ntBASIC3.15□□□□□ -1.91
SOX1O00570 RNU6-851P-201ENST00000384565 107 ntBASIC3.15□□□□□ -1.91
SOX1O00570 MIR592-201ENST00000384959 97 ntBASIC3.15□□□□□ -1.91
SOX1O00570 MIR1263-201ENST00000408324 86 ntBASIC3.15□□□□□ -1.91
SOX1O00570 AL031737.1-201ENST00000450125 223 ntBASIC3.15□□□□□ -1.91
SOX1O00570 RPL23AP67-201ENST00000465341 474 ntBASIC3.15□□□□□ -1.91
SOX1O00570 RN7SL20P-201ENST00000488827 297 ntBASIC3.15□□□□□ -1.91
SOX1O00570 SNORA72.7-201ENST00000516349 94 ntBASIC3.15□□□□□ -1.91
SOX1O00570 RNU6-412P-201ENST00000516434 106 ntBASIC3.15□□□□□ -1.91
SOX1O00570 RN7SKP282-201ENST00000516824 299 ntBASIC3.15□□□□□ -1.91
SOX1O00570 Y_RNA.714-201ENST00000517065 90 ntBASIC3.15□□□□□ -1.91
SOX1O00570 IGKV1-22-201ENST00000524313 326 ntBASIC3.15□□□□□ -1.91
SOX1O00570 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.15□□□□□ -1.91
SOX1O00570 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SOX1O00570 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SOX1O00570 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SOX1O00570 RNA5SP289-201ENST00000362332 137 ntBASIC3.14□□□□□ -1.91
SOX1O00570 RNU1-112P-201ENST00000364401 164 ntBASIC3.14□□□□□ -1.91
SOX1O00570 MIR561-201ENST00000385216 97 ntBASIC3.14□□□□□ -1.91
SOX1O00570 MIR591-201ENST00000385290 95 ntBASIC3.14□□□□□ -1.91
SOX1O00570 SNORA12.1-201ENST00000390873 148 ntBASIC3.14□□□□□ -1.91
SOX1O00570 RNU2-63P-201ENST00000410792 194 ntBASIC3.14□□□□□ -1.91
SOX1O00570 RNU6-341P-201ENST00000516973 96 ntBASIC3.14□□□□□ -1.91
SOX1O00570 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.14□□□□□ -1.91
SOX1O00570 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.14□□□□□ -1.91
SOX1O00570 MIR4648-201ENST00000580107 72 ntBASIC3.14□□□□□ -1.91
SOX1O00570 AC008507.4-201ENST00000585464 127 ntBASIC3.14□□□□□ -1.91
SOX1O00570 AC087685.1-201ENST00000587507 141 ntBASIC3.14□□□□□ -1.91
SOX1O00570 AL359075.3-201ENST00000613288 217 ntBASIC3.14□□□□□ -1.91
SOX1O00570 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
SOX1O00570 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SOX1O00570 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SOX1O00570 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SOX1O00570 RNU6-32P-201ENST00000383948 107 ntBASIC3.13□□□□□ -1.91
SOX1O00570 RNU6-13P-201ENST00000384248 107 ntBASIC3.13□□□□□ -1.91
SOX1O00570 Y_RNA.495-201ENST00000384435 112 ntBASIC3.13□□□□□ -1.91
SOX1O00570 Y_RNA.528-201ENST00000384575 108 ntBASIC3.13□□□□□ -1.91
SOX1O00570 RNU6-12P-201ENST00000384604 107 ntBASIC3.13□□□□□ -1.91
SOX1O00570 RNU6-41P-201ENST00000384741 107 ntBASIC3.13□□□□□ -1.91
SOX1O00570 SNORD72-201ENST00000390994 80 ntBASIC3.13□□□□□ -1.91
SOX1O00570 RNA5SP136-201ENST00000410906 107 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 299.4 ms