Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
SHISA3A0PJX4 RNA5SP50-201ENST00000363731 107 ntBASIC2.69□□□□□ -1.98
SHISA3A0PJX4 RNA5SP493-201ENST00000364115 91 ntBASIC2.69□□□□□ -1.98
SHISA3A0PJX4 RNU6-1164P-201ENST00000364428 107 ntBASIC2.69□□□□□ -1.98
SHISA3A0PJX4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
SHISA3A0PJX4 Y_RNA.410-201ENST00000383992 113 ntBASIC2.69□□□□□ -1.98
SHISA3A0PJX4 MIR34B-201ENST00000385076 84 ntBASIC2.69□□□□□ -1.98
SHISA3A0PJX4 SNORA11.4-201ENST00000408823 129 ntBASIC2.69□□□□□ -1.98
SHISA3A0PJX4 RNA5SP344-201ENST00000411081 104 ntBASIC2.69□□□□□ -1.98
SHISA3A0PJX4 TRIAP1P1-201ENST00000427062 225 ntBASIC2.69□□□□□ -1.98
SHISA3A0PJX4 RN7SL293P-201ENST00000481765 281 ntBASIC2.69□□□□□ -1.98
SHISA3A0PJX4 RN7SL297P-201ENST00000483161 293 ntBASIC2.69□□□□□ -1.98
SHISA3A0PJX4 AC006483.1-201ENST00000487308 313 ntBASIC2.69□□□□□ -1.98
SHISA3A0PJX4 RN7SL633P-201ENST00000488974 297 ntBASIC2.69□□□□□ -1.98
SHISA3A0PJX4 SCARNA15-202ENST00000516881 127 ntBASIC2.69□□□□□ -1.98
SHISA3A0PJX4 MIR3169-201ENST00000578032 83 ntBASIC2.69□□□□□ -1.98
SHISA3A0PJX4 MIR3613-201ENST00000579844 87 ntBASIC2.69□□□□□ -1.98
SHISA3A0PJX4 AC134878.1-201ENST00000619901 243 ntBASIC2.69□□□□□ -1.98
SHISA3A0PJX4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.69□□□□□ -1.98
SHISA3A0PJX4 SNORA50A-202ENST00000629536 136 ntBASIC2.69□□□□□ -1.98
SHISA3A0PJX4 MTND5P18-201ENST00000445624 1801 ntBASIC2.69□□□□□ -1.98
SHISA3A0PJX4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
SHISA3A0PJX4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SHISA3A0PJX4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.69□□□□□ -1.98
SHISA3A0PJX4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.68□□□□□ -1.98
SHISA3A0PJX4 Y_RNA.35-201ENST00000362601 101 ntBASIC2.68□□□□□ -1.98
SHISA3A0PJX4 RNU6-862P-201ENST00000362804 105 ntBASIC2.68□□□□□ -1.98
SHISA3A0PJX4 SNORD14E-201ENST00000364009 85 ntBASIC2.68□□□□□ -1.98
SHISA3A0PJX4 snoU2-30.1-201ENST00000365012 70 ntBASIC2.68□□□□□ -1.98
SHISA3A0PJX4 RNA5SP482-201ENST00000391269 118 ntBASIC2.68□□□□□ -1.98
SHISA3A0PJX4 RNA5SP136-201ENST00000410906 107 ntBASIC2.68□□□□□ -1.98
SHISA3A0PJX4 AC007064.1-201ENST00000412238 351 ntBASIC2.68□□□□□ -1.98
SHISA3A0PJX4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.68□□□□□ -1.98
SHISA3A0PJX4 RNU7-28P-201ENST00000516759 62 ntBASIC2.68□□□□□ -1.98
SHISA3A0PJX4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.68□□□□□ -1.98
SHISA3A0PJX4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SHISA3A0PJX4 AL021368.2-201ENST00000606125 5352 ntBASIC2.68□□□□□ -1.98
SHISA3A0PJX4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SHISA3A0PJX4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SHISA3A0PJX4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SHISA3A0PJX4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
SHISA3A0PJX4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.67□□□□□ -1.98
SHISA3A0PJX4 SNORD68-201ENST00000363214 84 ntBASIC2.67□□□□□ -1.98
SHISA3A0PJX4 RNU6-23P-201ENST00000363283 107 ntBASIC2.67□□□□□ -1.98
SHISA3A0PJX4 Y_RNA.336-201ENST00000365307 109 ntBASIC2.67□□□□□ -1.98
SHISA3A0PJX4 SNORA70.4-201ENST00000365509 134 ntBASIC2.67□□□□□ -1.98
SHISA3A0PJX4 MIR183-201ENST00000384958 110 ntBASIC2.67□□□□□ -1.98
SHISA3A0PJX4 SNORA11.1-201ENST00000408133 129 ntBASIC2.67□□□□□ -1.98
SHISA3A0PJX4 MIR548O-201ENST00000408583 114 ntBASIC2.67□□□□□ -1.98
SHISA3A0PJX4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.67□□□□□ -1.98
SHISA3A0PJX4 AL049873.1-201ENST00000480540 376 ntBASIC2.67□□□□□ -1.98
SHISA3A0PJX4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.67□□□□□ -1.98
SHISA3A0PJX4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
SHISA3A0PJX4 MIR4679-2-201ENST00000578358 77 ntBASIC2.67□□□□□ -1.98
SHISA3A0PJX4 AC007318.2-201ENST00000620999 243 ntBASIC2.67□□□□□ -1.98
SHISA3A0PJX4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SHISA3A0PJX4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.66□□□□□ -1.98
SHISA3A0PJX4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SHISA3A0PJX4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SHISA3A0PJX4 RNU6-1084P-201ENST00000362498 107 ntBASIC2.66□□□□□ -1.98
SHISA3A0PJX4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SHISA3A0PJX4 RNU6-147P-201ENST00000383983 107 ntBASIC2.66□□□□□ -1.98
SHISA3A0PJX4 MIR29C-201ENST00000385231 88 ntBASIC2.66□□□□□ -1.98
SHISA3A0PJX4 AC099677.2-201ENST00000436385 175 ntBASIC2.66□□□□□ -1.98
SHISA3A0PJX4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.66□□□□□ -1.98
SHISA3A0PJX4 HMGN2P32-201ENST00000444648 269 ntBASIC2.66□□□□□ -1.98
SHISA3A0PJX4 AL109933.2-201ENST00000452651 260 ntBASIC2.66□□□□□ -1.98
SHISA3A0PJX4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.66□□□□□ -1.98
SHISA3A0PJX4 TRBV12-1-201ENST00000479785 344 ntBASIC2.66□□□□□ -1.98
SHISA3A0PJX4 IGKV1-22-201ENST00000524313 326 ntBASIC2.66□□□□□ -1.98
SHISA3A0PJX4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.66□□□□□ -1.98
SHISA3A0PJX4 MIR3922-201ENST00000585192 84 ntBASIC2.66□□□□□ -1.98
SHISA3A0PJX4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.66□□□□□ -1.98
SHISA3A0PJX4 U6.105-201ENST00000637379 88 ntBASIC2.66□□□□□ -1.98
SHISA3A0PJX4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SHISA3A0PJX4 SNORD67-201ENST00000390833 111 ntBASIC2.65□□□□□ -1.99
SHISA3A0PJX4 RNA5SP274-201ENST00000410484 108 ntBASIC2.65□□□□□ -1.99
SHISA3A0PJX4 RN7SKP220-201ENST00000410611 288 ntBASIC2.65□□□□□ -1.99
SHISA3A0PJX4 AC245047.3-201ENST00000429428 127 ntBASIC2.65□□□□□ -1.99
SHISA3A0PJX4 AC092427.1-202ENST00000430569 476 ntBASIC2.65□□□□□ -1.99
SHISA3A0PJX4 RNU6-412P-201ENST00000516434 106 ntBASIC2.65□□□□□ -1.99
SHISA3A0PJX4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.65□□□□□ -1.99
SHISA3A0PJX4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.65□□□□□ -1.99
SHISA3A0PJX4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.65□□□□□ -1.99
SHISA3A0PJX4 AC005786.1-201ENST00000588553 154 ntBASIC2.65□□□□□ -1.99
SHISA3A0PJX4 SNORD115-28-201ENST00000363931 81 ntBASIC2.64□□□□□ -1.99
SHISA3A0PJX4 Y_RNA.309-201ENST00000365046 111 ntBASIC2.64□□□□□ -1.99
SHISA3A0PJX4 RNU6-1189P-201ENST00000383958 107 ntBASIC2.64□□□□□ -1.99
SHISA3A0PJX4 MIR548A1-201ENST00000385041 97 ntBASIC2.64□□□□□ -1.99
SHISA3A0PJX4 SNORA48.8-201ENST00000391324 134 ntBASIC2.64□□□□□ -1.99
SHISA3A0PJX4 MIR1263-201ENST00000408324 86 ntBASIC2.64□□□□□ -1.99
SHISA3A0PJX4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.64□□□□□ -1.99
SHISA3A0PJX4 SNRPGP14-201ENST00000435400 219 ntBASIC2.64□□□□□ -1.99
SHISA3A0PJX4 AC104389.3-201ENST00000445629 235 ntBASIC2.64□□□□□ -1.99
SHISA3A0PJX4 COX6CP6-201ENST00000490840 228 ntBASIC2.64□□□□□ -1.99
SHISA3A0PJX4 RPS26P48-201ENST00000491713 339 ntBASIC2.64□□□□□ -1.99
SHISA3A0PJX4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.64□□□□□ -1.99
SHISA3A0PJX4 AC004486.1-201ENST00000546846 233 ntBASIC2.64□□□□□ -1.99
SHISA3A0PJX4 AC007179.3-201ENST00000604976 235 ntBASIC2.64□□□□□ -1.99
SHISA3A0PJX4 AL137067.1-201ENST00000615933 120 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 499.8 ms