Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 Y_RNA.35-201ENST00000362601 101 ntBASIC3.65□□□□□ -1.83
RFC5P40937 RNU6-23P-201ENST00000363283 107 ntBASIC3.65□□□□□ -1.83
RFC5P40937 SNORA38.1-201ENST00000364172 131 ntBASIC3.65□□□□□ -1.83
RFC5P40937 snoU2-30.1-201ENST00000365012 70 ntBASIC3.65□□□□□ -1.83
RFC5P40937 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
RFC5P40937 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.65□□□□□ -1.83
RFC5P40937 MIR4762-201ENST00000585261 75 ntBASIC3.65□□□□□ -1.83
RFC5P40937 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.65□□□□□ -1.83
RFC5P40937 YPEL5P2-201ENST00000605553 359 ntBASIC3.65□□□□□ -1.83
RFC5P40937 uc_338.1-201ENST00000612113 180 ntBASIC3.65□□□□□ -1.83
RFC5P40937 AC134878.1-201ENST00000619901 243 ntBASIC3.65□□□□□ -1.83
RFC5P40937 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RFC5P40937 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.65□□□□□ -1.83
RFC5P40937 MTND5P18-201ENST00000445624 1801 ntBASIC3.65□□□□□ -1.83
RFC5P40937 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
RFC5P40937 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.64□□□□□ -1.83
RFC5P40937 Y_RNA.410-201ENST00000383992 113 ntBASIC3.64□□□□□ -1.83
RFC5P40937 MIR518F-201ENST00000384973 87 ntBASIC3.64□□□□□ -1.83
RFC5P40937 RNA5SP482-201ENST00000391269 118 ntBASIC3.64□□□□□ -1.83
RFC5P40937 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.64□□□□□ -1.83
RFC5P40937 AL109933.2-201ENST00000452651 260 ntBASIC3.64□□□□□ -1.83
RFC5P40937 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.64□□□□□ -1.83
RFC5P40937 RN7SL442P-201ENST00000473804 320 ntBASIC3.64□□□□□ -1.83
RFC5P40937 TRBV12-1-201ENST00000479785 344 ntBASIC3.64□□□□□ -1.83
RFC5P40937 AL049873.1-201ENST00000480540 376 ntBASIC3.64□□□□□ -1.83
RFC5P40937 RN7SL297P-201ENST00000483161 293 ntBASIC3.64□□□□□ -1.83
RFC5P40937 RNU7-28P-201ENST00000516759 62 ntBASIC3.64□□□□□ -1.83
RFC5P40937 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.64□□□□□ -1.83
RFC5P40937 AL161756.2-201ENST00000604597 246 ntBASIC3.64□□□□□ -1.83
RFC5P40937 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.64□□□□□ -1.83
RFC5P40937 MIR3651-201ENST00000630427 90 ntBASIC3.64□□□□□ -1.83
RFC5P40937 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.64□□□□□ -1.83
RFC5P40937 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RFC5P40937 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
RFC5P40937 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RFC5P40937 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.63□□□□□ -1.83
RFC5P40937 RNU1-70P-201ENST00000362618 164 ntBASIC3.63□□□□□ -1.83
RFC5P40937 RNU6-1164P-201ENST00000364428 107 ntBASIC3.63□□□□□ -1.83
RFC5P40937 U8.5-201ENST00000364528 136 ntBASIC3.63□□□□□ -1.83
RFC5P40937 SNORA9-201ENST00000384215 133 ntBASIC3.63□□□□□ -1.83
RFC5P40937 MIR548A1-201ENST00000385041 97 ntBASIC3.63□□□□□ -1.83
RFC5P40937 MIR1263-201ENST00000408324 86 ntBASIC3.63□□□□□ -1.83
RFC5P40937 MIR548O-201ENST00000408583 114 ntBASIC3.63□□□□□ -1.83
RFC5P40937 RN7SKP220-201ENST00000410611 288 ntBASIC3.63□□□□□ -1.83
RFC5P40937 RNU4-47P-201ENST00000410876 114 ntBASIC3.63□□□□□ -1.83
RFC5P40937 RNA5SP136-201ENST00000410906 107 ntBASIC3.63□□□□□ -1.83
RFC5P40937 AC010401.1-201ENST00000463867 348 ntBASIC3.63□□□□□ -1.83
RFC5P40937 SNORA70.24-201ENST00000517233 118 ntBASIC3.63□□□□□ -1.83
RFC5P40937 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.63□□□□□ -1.83
RFC5P40937 MIR5197-201ENST00000583721 112 ntBASIC3.63□□□□□ -1.83
RFC5P40937 AC006441.5-201ENST00000612680 209 ntBASIC3.63□□□□□ -1.83
RFC5P40937 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.63□□□□□ -1.83
RFC5P40937 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.63□□□□□ -1.83
RFC5P40937 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
RFC5P40937 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RFC5P40937 AC093908.1-201ENST00000623125 8092 ntBASIC3.63□□□□□ -1.83
RFC5P40937 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RFC5P40937 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RFC5P40937 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.62□□□□□ -1.83
RFC5P40937 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
RFC5P40937 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RFC5P40937 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
RFC5P40937 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RFC5P40937 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.62□□□□□ -1.83
RFC5P40937 RPL23AP83-201ENST00000434984 473 ntBASIC3.62□□□□□ -1.83
RFC5P40937 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.62□□□□□ -1.83
RFC5P40937 MIR2276-201ENST00000516886 89 ntBASIC3.62□□□□□ -1.83
RFC5P40937 MIR3169-201ENST00000578032 83 ntBASIC3.62□□□□□ -1.83
RFC5P40937 MIR4679-2-201ENST00000578358 77 ntBASIC3.62□□□□□ -1.83
RFC5P40937 MIR5004-201ENST00000579078 107 ntBASIC3.62□□□□□ -1.83
RFC5P40937 MIR3613-201ENST00000579844 87 ntBASIC3.62□□□□□ -1.83
RFC5P40937 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.62□□□□□ -1.83
RFC5P40937 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RFC5P40937 MIR491-201ENST00000384877 84 ntBASIC3.61□□□□□ -1.83
RFC5P40937 RNA5SP229-201ENST00000410809 99 ntBASIC3.61□□□□□ -1.83
RFC5P40937 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.61□□□□□ -1.83
RFC5P40937 AC245047.3-201ENST00000429428 127 ntBASIC3.61□□□□□ -1.83
RFC5P40937 SCARNA15-202ENST00000516881 127 ntBASIC3.61□□□□□ -1.83
RFC5P40937 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.61□□□□□ -1.83
RFC5P40937 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RFC5P40937 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
RFC5P40937 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
RFC5P40937 MIR30E-201ENST00000362104 92 ntBASIC3.6□□□□□ -1.83
RFC5P40937 Y_RNA.265-201ENST00000364677 108 ntBASIC3.6□□□□□ -1.83
RFC5P40937 Y_RNA.336-201ENST00000365307 109 ntBASIC3.6□□□□□ -1.83
RFC5P40937 Y_RNA.528-201ENST00000384575 108 ntBASIC3.6□□□□□ -1.83
RFC5P40937 MIR29C-201ENST00000385231 88 ntBASIC3.6□□□□□ -1.83
RFC5P40937 AC092427.1-202ENST00000430569 476 ntBASIC3.6□□□□□ -1.83
RFC5P40937 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.6□□□□□ -1.83
RFC5P40937 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.6□□□□□ -1.83
RFC5P40937 AC104389.3-201ENST00000445629 235 ntBASIC3.6□□□□□ -1.83
RFC5P40937 IGKV1-22-201ENST00000524313 326 ntBASIC3.6□□□□□ -1.83
RFC5P40937 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.59□□□□□ -1.83
RFC5P40937 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
RFC5P40937 AP006437.1-201ENST00000641440 3685 ntBASIC3.59□□□□□ -1.83
RFC5P40937 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
RFC5P40937 RNU6-1189P-201ENST00000383958 107 ntBASIC3.59□□□□□ -1.83
RFC5P40937 RNU6-147P-201ENST00000383983 107 ntBASIC3.59□□□□□ -1.83
RFC5P40937 SNORA48.8-201ENST00000391324 134 ntBASIC3.59□□□□□ -1.83
RFC5P40937 TRIAP1P1-201ENST00000427062 225 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 160.8 ms