Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 SNORD28B-201ENST00000390993 75 ntBASIC-0.66□□□□□ -2.51
SPTA1P02549 SNORD93-201ENST00000408813 74 ntBASIC-0.66□□□□□ -2.51
SPTA1P02549 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.66□□□□□ -2.51
SPTA1P02549 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.66□□□□□ -2.51
SPTA1P02549 snoU13.16-201ENST00000459350 104 ntBASIC-0.66□□□□□ -2.51
SPTA1P02549 RNU6-344P-201ENST00000516635 111 ntBASIC-0.66□□□□□ -2.51
SPTA1P02549 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.66□□□□□ -2.51
SPTA1P02549 AC125232.2-201ENST00000592457 143 ntBASIC-0.66□□□□□ -2.51
SPTA1P02549 AL359999.1-201ENST00000604513 294 ntBASIC-0.66□□□□□ -2.51
SPTA1P02549 SNORA27.1-201ENST00000362604 124 ntBASIC-0.66□□□□□ -2.52
SPTA1P02549 RNU6-384P-201ENST00000364900 104 ntBASIC-0.66□□□□□ -2.52
SPTA1P02549 RNU6-652P-201ENST00000365488 107 ntBASIC-0.66□□□□□ -2.52
SPTA1P02549 RNU6-692P-201ENST00000384496 107 ntBASIC-0.66□□□□□ -2.52
SPTA1P02549 MIR548L-201ENST00000408303 86 ntBASIC-0.66□□□□□ -2.52
SPTA1P02549 RNU6-602P-201ENST00000411155 105 ntBASIC-0.66□□□□□ -2.52
SPTA1P02549 FCF1P9-201ENST00000412546 282 ntBASIC-0.66□□□□□ -2.52
SPTA1P02549 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.66□□□□□ -2.52
SPTA1P02549 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-0.66□□□□□ -2.52
SPTA1P02549 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.66□□□□□ -2.52
SPTA1P02549 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-0.66□□□□□ -2.52
SPTA1P02549 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.66□□□□□ -2.52
SPTA1P02549 RNU6-727P-201ENST00000363592 107 ntBASIC-0.67□□□□□ -2.52
SPTA1P02549 SNORA25.7-201ENST00000364375 127 ntBASIC-0.67□□□□□ -2.52
SPTA1P02549 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.67□□□□□ -2.52
SPTA1P02549 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.67□□□□□ -2.52
SPTA1P02549 MLLT10P1-201ENST00000418346 262 ntBASIC-0.67□□□□□ -2.52
SPTA1P02549 AC008134.1-201ENST00000420943 193 ntBASIC-0.67□□□□□ -2.52
SPTA1P02549 AC018710.1-201ENST00000506509 158 ntBASIC-0.67□□□□□ -2.52
SPTA1P02549 AC117522.1-201ENST00000509821 380 ntBASIC-0.67□□□□□ -2.52
SPTA1P02549 RNU7-28P-201ENST00000516759 62 ntBASIC-0.67□□□□□ -2.52
SPTA1P02549 RNU6-685P-201ENST00000517088 95 ntBASIC-0.67□□□□□ -2.52
SPTA1P02549 MIR4306-201ENST00000583390 91 ntBASIC-0.67□□□□□ -2.52
SPTA1P02549 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.67□□□□□ -2.52
SPTA1P02549 Y_RNA.465-201ENST00000384293 102 ntBASIC-0.67□□□□□ -2.52
SPTA1P02549 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.67□□□□□ -2.52
SPTA1P02549 MIR215-201ENST00000384858 110 ntBASIC-0.67□□□□□ -2.52
SPTA1P02549 MIR136-201ENST00000385207 82 ntBASIC-0.67□□□□□ -2.52
SPTA1P02549 ELOCP17-201ENST00000414751 326 ntBASIC-0.67□□□□□ -2.52
SPTA1P02549 AC114491.1-201ENST00000416095 246 ntBASIC-0.67□□□□□ -2.52
SPTA1P02549 MTND1P26-201ENST00000440488 538 ntBASIC-0.67□□□□□ -2.52
SPTA1P02549 AL138752.1-201ENST00000452964 351 ntBASIC-0.67□□□□□ -2.52
SPTA1P02549 MIR18B-201ENST00000454574 71 ntBASIC-0.67□□□□□ -2.52
SPTA1P02549 AC008608.1-201ENST00000603910 127 ntBASIC-0.67□□□□□ -2.52
SPTA1P02549 AC022306.2-201ENST00000617563 647 ntBASIC-0.67□□□□□ -2.52
SPTA1P02549 U6.73-201ENST00000619194 103 ntBASIC-0.67□□□□□ -2.52
SPTA1P02549 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.68□□□□□ -2.52
SPTA1P02549 RNU6-827P-201ENST00000365553 106 ntBASIC-0.68□□□□□ -2.52
SPTA1P02549 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.68□□□□□ -2.52
SPTA1P02549 RNU6-455P-201ENST00000384681 107 ntBASIC-0.68□□□□□ -2.52
SPTA1P02549 MTND4LP7-201ENST00000431728 294 ntBASIC-0.68□□□□□ -2.52
SPTA1P02549 EPS15P1-201ENST00000448836 336 ntBASIC-0.68□□□□□ -2.52
SPTA1P02549 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.68□□□□□ -2.52
SPTA1P02549 MTCO2P6-201ENST00000463134 685 ntBASIC-0.68□□□□□ -2.52
SPTA1P02549 MTND1P8-201ENST00000571424 950 ntBASIC-0.68□□□□□ -2.52
SPTA1P02549 AC072039.2-201ENST00000608883 439 ntBASIC-0.68□□□□□ -2.52
SPTA1P02549 RNU6-226P-201ENST00000363778 107 ntBASIC-0.68□□□□□ -2.52
SPTA1P02549 RNU4-36P-201ENST00000364294 144 ntBASIC-0.68□□□□□ -2.52
SPTA1P02549 RNU6-336P-201ENST00000364891 107 ntBASIC-0.68□□□□□ -2.52
SPTA1P02549 RNU6-468P-201ENST00000384003 109 ntBASIC-0.68□□□□□ -2.52
SPTA1P02549 MT-TN-201ENST00000387400 73 ntBASIC-0.68□□□□□ -2.52
SPTA1P02549 RPS29P13-201ENST00000402041 169 ntBASIC-0.68□□□□□ -2.52
SPTA1P02549 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.68□□□□□ -2.52
SPTA1P02549 BX276092.1-201ENST00000427368 251 ntBASIC-0.68□□□□□ -2.52
SPTA1P02549 RNU2-11P-201ENST00000459191 187 ntBASIC-0.68□□□□□ -2.52
SPTA1P02549 AL136370.1-201ENST00000608166 691 ntBASIC-0.68□□□□□ -2.52
SPTA1P02549 AC137590.2-201ENST00000619709 240 ntBASIC-0.68□□□□□ -2.52
SPTA1P02549 AC006435.5-201ENST00000624486 112 ntBASIC-0.68□□□□□ -2.52
SPTA1P02549 AC005609.4-201ENST00000625071 447 ntBASIC-0.68□□□□□ -2.52
SPTA1P02549 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.69□□□□□ -2.52
SPTA1P02549 AC004386.2-201ENST00000441858 148 ntBASIC-0.69□□□□□ -2.52
SPTA1P02549 RNU2-10P-201ENST00000516375 211 ntBASIC-0.69□□□□□ -2.52
SPTA1P02549 RNU6-63P-201ENST00000516690 95 ntBASIC-0.69□□□□□ -2.52
SPTA1P02549 HIF1AP1-201ENST00000553642 175 ntBASIC-0.69□□□□□ -2.52
SPTA1P02549 AGGF1P4-201ENST00000568249 801 ntBASIC-0.69□□□□□ -2.52
SPTA1P02549 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.69□□□□□ -2.52
SPTA1P02549 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.69□□□□□ -2.52
SPTA1P02549 MIR4762-201ENST00000585261 75 ntBASIC-0.69□□□□□ -2.52
SPTA1P02549 AC023158.2-201ENST00000614876 543 ntBASIC-0.69□□□□□ -2.52
SPTA1P02549 AC091912.2-201ENST00000624798 167 ntBASIC-0.69□□□□□ -2.52
SPTA1P02549 AC010332.2-201ENST00000613083 1904 ntBASIC-0.69□□□□□ -2.52
SPTA1P02549 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.69□□□□□ -2.52
SPTA1P02549 AC010424.1-201ENST00000506336 297 ntBASIC-0.69□□□□□ -2.52
SPTA1P02549 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.69□□□□□ -2.52
SPTA1P02549 AC107027.2-201ENST00000512197 115 ntBASIC-0.69□□□□□ -2.52
SPTA1P02549 RNU7-181P-201ENST00000517234 74 ntBASIC-0.69□□□□□ -2.52
SPTA1P02549 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.69□□□□□ -2.52
SPTA1P02549 AP000907.4-201ENST00000604143 237 ntBASIC-0.69□□□□□ -2.52
SPTA1P02549 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.7□□□□□ -2.52
SPTA1P02549 U8.6-201ENST00000364939 135 ntBASIC-0.7□□□□□ -2.52
SPTA1P02549 Y_RNA.480-201ENST00000384364 102 ntBASIC-0.7□□□□□ -2.52
SPTA1P02549 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.7□□□□□ -2.52
SPTA1P02549 MTND2P18-201ENST00000419962 1030 ntBASIC-0.7□□□□□ -2.52
SPTA1P02549 AC006210.1-201ENST00000424882 111 ntBASIC-0.7□□□□□ -2.52
SPTA1P02549 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.7□□□□□ -2.52
SPTA1P02549 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-0.7□□□□□ -2.52
SPTA1P02549 RNU6-341P-201ENST00000516973 96 ntBASIC-0.7□□□□□ -2.52
SPTA1P02549 AC131281.1-201ENST00000522984 164 ntBASIC-0.7□□□□□ -2.52
SPTA1P02549 AP003168.1-201ENST00000530091 307 ntBASIC-0.7□□□□□ -2.52
SPTA1P02549 MTND4P33-201ENST00000556706 766 ntBASIC-0.7□□□□□ -2.52
SPTA1P02549 MIR5692A1-201ENST00000580523 69 ntBASIC-0.7□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms