Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 RNU6-926P-201ENST00000384075 107 ntBASIC1□□□□□ -2.25
MSH4O15457 RNU6-318P-201ENST00000384283 103 ntBASIC1□□□□□ -2.25
MSH4O15457 RNU6-424P-201ENST00000384367 105 ntBASIC1□□□□□ -2.25
MSH4O15457 U8.16-201ENST00000391279 133 ntBASIC1□□□□□ -2.25
MSH4O15457 RNU6-1156P-201ENST00000410365 100 ntBASIC1□□□□□ -2.25
MSH4O15457 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1□□□□□ -2.25
MSH4O15457 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1□□□□□ -2.25
MSH4O15457 MRPS18CP6-201ENST00000423587 223 ntBASIC1□□□□□ -2.25
MSH4O15457 AC096644.2-201ENST00000429278 159 ntBASIC1□□□□□ -2.25
MSH4O15457 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1□□□□□ -2.25
MSH4O15457 RNU6-1278P-201ENST00000516130 107 ntBASIC1□□□□□ -2.25
MSH4O15457 RNU6-277P-201ENST00000516272 106 ntBASIC1□□□□□ -2.25
MSH4O15457 RNA5SP220-201ENST00000516298 104 ntBASIC1□□□□□ -2.25
MSH4O15457 RNU6-307P-201ENST00000516743 106 ntBASIC1□□□□□ -2.25
MSH4O15457 MIR4698-201ENST00000577795 80 ntBASIC1□□□□□ -2.25
MSH4O15457 AL022345.2-201ENST00000606307 135 ntBASIC1□□□□□ -2.25
MSH4O15457 GHRLOS.1-201ENST00000610995 70 ntBASIC1□□□□□ -2.25
MSH4O15457 MIR6857-201ENST00000613267 93 ntBASIC1□□□□□ -2.25
MSH4O15457 AC087588.2-201ENST00000617667 426 ntBASIC1□□□□□ -2.25
MSH4O15457 U6.115-201ENST00000636045 103 ntBASIC1□□□□□ -2.25
MSH4O15457 MIR3674-201ENST00000636576 68 ntBASIC1□□□□□ -2.25
MSH4O15457 MIR1302-1-201ENST00000637932 143 ntBASIC1□□□□□ -2.25
MSH4O15457 MIR410-201ENST00000362222 80 ntBASIC0.99□□□□□ -2.25
MSH4O15457 SNORA1B-201ENST00000362535 133 ntBASIC0.99□□□□□ -2.25
MSH4O15457 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.99□□□□□ -2.25
MSH4O15457 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
MSH4O15457 RNA5SP475-201ENST00000410568 110 ntBASIC0.99□□□□□ -2.25
MSH4O15457 AC114482.1-201ENST00000418010 247 ntBASIC0.99□□□□□ -2.25
MSH4O15457 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.99□□□□□ -2.25
MSH4O15457 RAB28P5-201ENST00000427490 651 ntBASIC0.99□□□□□ -2.25
MSH4O15457 AL137792.2-201ENST00000443484 235 ntBASIC0.99□□□□□ -2.25
MSH4O15457 Y_RNA.653-201ENST00000459091 95 ntBASIC0.99□□□□□ -2.25
MSH4O15457 OR9P1P-201ENST00000496431 281 ntBASIC0.99□□□□□ -2.25
MSH4O15457 SNORA40.9-201ENST00000515895 93 ntBASIC0.99□□□□□ -2.25
MSH4O15457 RNU6-470P-201ENST00000515954 104 ntBASIC0.99□□□□□ -2.25
MSH4O15457 SNORD116-28-201ENST00000516123 91 ntBASIC0.99□□□□□ -2.25
MSH4O15457 RNU6-875P-201ENST00000516488 106 ntBASIC0.99□□□□□ -2.25
MSH4O15457 RNU6-1291P-201ENST00000516591 104 ntBASIC0.99□□□□□ -2.25
MSH4O15457 RNU7-28P-201ENST00000516759 62 ntBASIC0.99□□□□□ -2.25
MSH4O15457 RNA5SP404-201ENST00000517118 132 ntBASIC0.99□□□□□ -2.25
MSH4O15457 RNU6-264P-201ENST00000517134 104 ntBASIC0.99□□□□□ -2.25
MSH4O15457 AP002004.2-201ENST00000531656 154 ntBASIC0.99□□□□□ -2.25
MSH4O15457 AP002001.1-203ENST00000534002 267 ntBASIC0.99□□□□□ -2.25
MSH4O15457 AC091178.2-201ENST00000584401 117 ntBASIC0.99□□□□□ -2.25
MSH4O15457 UBE2V2P2-201ENST00000587677 504 ntBASIC0.99□□□□□ -2.25
MSH4O15457 FAM71BP1-201ENST00000604431 523 ntBASIC0.99□□□□□ -2.25
MSH4O15457 AL132765.2-201ENST00000610812 351 ntBASIC0.99□□□□□ -2.25
MSH4O15457 AC025253.1-201ENST00000613623 543 ntBASIC0.99□□□□□ -2.25
MSH4O15457 AC005592.1-201ENST00000566527 1640 ntBASIC0.98□□□□□ -2.25
MSH4O15457 Y_RNA.259-201ENST00000364619 101 ntBASIC0.98□□□□□ -2.25
MSH4O15457 Y_RNA.356-201ENST00000365475 113 ntBASIC0.98□□□□□ -2.25
MSH4O15457 RNU6-42P-201ENST00000384165 107 ntBASIC0.98□□□□□ -2.25
MSH4O15457 SNORD116-29-201ENST00000384516 83 ntBASIC0.98□□□□□ -2.25
MSH4O15457 Y_RNA.529-201ENST00000384586 119 ntBASIC0.98□□□□□ -2.25
MSH4O15457 MIR653-201ENST00000385279 96 ntBASIC0.98□□□□□ -2.25
MSH4O15457 SNORA75.6-201ENST00000391318 127 ntBASIC0.98□□□□□ -2.25
MSH4O15457 MIR873-201ENST00000401120 77 ntBASIC0.98□□□□□ -2.25
MSH4O15457 MIR548J-201ENST00000408833 112 ntBASIC0.98□□□□□ -2.25
MSH4O15457 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.98□□□□□ -2.25
MSH4O15457 HSPE1P13-201ENST00000451143 297 ntBASIC0.98□□□□□ -2.25
MSH4O15457 AL355375.2-201ENST00000574825 175 ntBASIC0.98□□□□□ -2.25
MSH4O15457 MIR4801-201ENST00000582704 82 ntBASIC0.98□□□□□ -2.25
MSH4O15457 RBM11P1-201ENST00000604951 799 ntBASIC0.98□□□□□ -2.25
MSH4O15457 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.98□□□□□ -2.25
MSH4O15457 AC084781.2-201ENST00000615568 161 ntBASIC0.98□□□□□ -2.25
MSH4O15457 MIR6788-201ENST00000618842 66 ntBASIC0.98□□□□□ -2.25
MSH4O15457 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.98□□□□□ -2.25
MSH4O15457 MIR6734-201ENST00000621166 68 ntBASIC0.98□□□□□ -2.25
MSH4O15457 AC027335.2-201ENST00000624030 375 ntBASIC0.98□□□□□ -2.25
MSH4O15457 RNU6-1301P-201ENST00000362724 104 ntBASIC0.97□□□□□ -2.25
MSH4O15457 Y_RNA.58-201ENST00000362807 102 ntBASIC0.97□□□□□ -2.25
MSH4O15457 Y_RNA.124-201ENST00000363339 93 ntBASIC0.97□□□□□ -2.25
MSH4O15457 Y_RNA.154-201ENST00000363624 102 ntBASIC0.97□□□□□ -2.25
MSH4O15457 RNU1-124P-201ENST00000363861 145 ntBASIC0.97□□□□□ -2.25
MSH4O15457 RNU6-454P-201ENST00000364292 107 ntBASIC0.97□□□□□ -2.25
MSH4O15457 RNY3P1-201ENST00000365085 102 ntBASIC0.97□□□□□ -2.25
MSH4O15457 Y_RNA.314-201ENST00000365114 102 ntBASIC0.97□□□□□ -2.25
MSH4O15457 RNY3-201ENST00000365484 102 ntBASIC0.97□□□□□ -2.25
MSH4O15457 Y_RNA.387-201ENST00000383918 102 ntBASIC0.97□□□□□ -2.25
MSH4O15457 SNORD41-201ENST00000386967 70 ntBASIC0.97□□□□□ -2.25
MSH4O15457 SNORA69.1-201ENST00000390904 137 ntBASIC0.97□□□□□ -2.25
MSH4O15457 AL451046.2-201ENST00000403074 277 ntBASIC0.97□□□□□ -2.25
MSH4O15457 SNORD12B-201ENST00000410433 91 ntBASIC0.97□□□□□ -2.25
MSH4O15457 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.97□□□□□ -2.25
MSH4O15457 AC093850.1-201ENST00000454121 251 ntBASIC0.97□□□□□ -2.25
MSH4O15457 RNU6-408P-201ENST00000515910 100 ntBASIC0.97□□□□□ -2.25
MSH4O15457 RNU6-322P-201ENST00000516010 103 ntBASIC0.97□□□□□ -2.25
MSH4O15457 SNORA31.2-201ENST00000516019 134 ntBASIC0.97□□□□□ -2.25
MSH4O15457 RNU7-12P-201ENST00000516030 62 ntBASIC0.97□□□□□ -2.25
MSH4O15457 Y_RNA.718-201ENST00000517110 102 ntBASIC0.97□□□□□ -2.25
MSH4O15457 SNORA70.22-201ENST00000517160 124 ntBASIC0.97□□□□□ -2.25
MSH4O15457 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.97□□□□□ -2.25
MSH4O15457 AC093027.1-201ENST00000546698 429 ntBASIC0.97□□□□□ -2.25
MSH4O15457 AC090049.2-201ENST00000550377 109 ntBASIC0.97□□□□□ -2.25
MSH4O15457 MIR548S-201ENST00000581352 82 ntBASIC0.97□□□□□ -2.25
MSH4O15457 MIR151B-201ENST00000584249 96 ntBASIC0.97□□□□□ -2.25
MSH4O15457 HSPE1P19-201ENST00000603327 295 ntBASIC0.97□□□□□ -2.25
MSH4O15457 AC211469.2-201ENST00000605461 205 ntBASIC0.97□□□□□ -2.25
MSH4O15457 AC127459.3-201ENST00000624328 466 ntBASIC0.97□□□□□ -2.25
MSH4O15457 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 213.1 ms