Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 RNU11-3P-201ENST00000391111 133 ntBASIC1.39□□□□□ -2.19
HDAC3O15379 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HDAC3O15379 AL355796.1-201ENST00000406706 323 ntBASIC1.39□□□□□ -2.19
HDAC3O15379 RNU2-54P-201ENST00000410299 190 ntBASIC1.39□□□□□ -2.19
HDAC3O15379 RNA5SP475-201ENST00000410568 110 ntBASIC1.39□□□□□ -2.19
HDAC3O15379 MRPS10P1-201ENST00000448483 130 ntBASIC1.39□□□□□ -2.19
HDAC3O15379 SNORD13-201ENST00000459299 104 ntBASIC1.39□□□□□ -2.19
HDAC3O15379 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.39□□□□□ -2.19
HDAC3O15379 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.39□□□□□ -2.19
HDAC3O15379 AC011406.1-201ENST00000512440 370 ntBASIC1.39□□□□□ -2.19
HDAC3O15379 RNVU1-2-201ENST00000516326 135 ntBASIC1.39□□□□□ -2.19
HDAC3O15379 RNU6-155P-201ENST00000516347 100 ntBASIC1.39□□□□□ -2.19
HDAC3O15379 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.39□□□□□ -2.19
HDAC3O15379 MIR3145-201ENST00000580727 82 ntBASIC1.39□□□□□ -2.19
HDAC3O15379 AC011373.1-201ENST00000607270 237 ntBASIC1.39□□□□□ -2.19
HDAC3O15379 AP001282.2-201ENST00000616149 309 ntBASIC1.39□□□□□ -2.19
HDAC3O15379 7SK.10-201ENST00000621414 298 ntBASIC1.39□□□□□ -2.19
HDAC3O15379 RNU6-862P-201ENST00000362804 105 ntBASIC1.38□□□□□ -2.19
HDAC3O15379 U8.1-201ENST00000362843 134 ntBASIC1.38□□□□□ -2.19
HDAC3O15379 Y_RNA.124-201ENST00000363339 93 ntBASIC1.38□□□□□ -2.19
HDAC3O15379 SNORD115-30-201ENST00000364117 82 ntBASIC1.38□□□□□ -2.19
HDAC3O15379 SNORA72.2-201ENST00000365028 127 ntBASIC1.38□□□□□ -2.19
HDAC3O15379 Y_RNA.418-201ENST00000384029 102 ntBASIC1.38□□□□□ -2.19
HDAC3O15379 RNU6-713P-201ENST00000384761 107 ntBASIC1.38□□□□□ -2.19
HDAC3O15379 RNU6-1203P-201ENST00000410703 110 ntBASIC1.38□□□□□ -2.19
HDAC3O15379 RNA5SP501-201ENST00000410990 112 ntBASIC1.38□□□□□ -2.19
HDAC3O15379 RNU5A-5P-201ENST00000411054 116 ntBASIC1.38□□□□□ -2.19
HDAC3O15379 RPL30P13-201ENST00000418873 348 ntBASIC1.38□□□□□ -2.19
HDAC3O15379 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.38□□□□□ -2.19
HDAC3O15379 AL354695.1-201ENST00000427935 228 ntBASIC1.38□□□□□ -2.19
HDAC3O15379 ATP5J2P3-201ENST00000451550 258 ntBASIC1.38□□□□□ -2.19
HDAC3O15379 AC027419.1-201ENST00000522976 328 ntBASIC1.38□□□□□ -2.19
HDAC3O15379 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.38□□□□□ -2.19
HDAC3O15379 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.38□□□□□ -2.19
HDAC3O15379 AC127459.3-201ENST00000624328 466 ntBASIC1.38□□□□□ -2.19
HDAC3O15379 U6.115-201ENST00000636045 103 ntBASIC1.38□□□□□ -2.19
HDAC3O15379 MIR338-201ENST00000636369 67 ntBASIC1.38□□□□□ -2.19
HDAC3O15379 snoU2-30.2-201ENST00000362805 70 ntBASIC1.37□□□□□ -2.19
HDAC3O15379 Y_RNA.243-201ENST00000364481 109 ntBASIC1.37□□□□□ -2.19
HDAC3O15379 SNORD26-201ENST00000384147 75 ntBASIC1.37□□□□□ -2.19
HDAC3O15379 SNORA20B-201ENST00000384220 132 ntBASIC1.37□□□□□ -2.19
HDAC3O15379 RNU2-38P-201ENST00000410856 79 ntBASIC1.37□□□□□ -2.19
HDAC3O15379 AL135790.2-201ENST00000437701 267 ntBASIC1.37□□□□□ -2.19
HDAC3O15379 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.37□□□□□ -2.19
HDAC3O15379 AC074290.1-201ENST00000448883 135 ntBASIC1.37□□□□□ -2.19
HDAC3O15379 SNORD65B-201ENST00000459126 73 ntBASIC1.37□□□□□ -2.19
HDAC3O15379 RNU6-436P-201ENST00000516171 114 ntBASIC1.37□□□□□ -2.19
HDAC3O15379 Y_RNA.668-201ENST00000516233 93 ntBASIC1.37□□□□□ -2.19
HDAC3O15379 Y_RNA.680-201ENST00000516441 93 ntBASIC1.37□□□□□ -2.19
HDAC3O15379 SNORA31.24-201ENST00000517232 57 ntBASIC1.37□□□□□ -2.19
HDAC3O15379 RNU7-128P-201ENST00000517247 62 ntBASIC1.37□□□□□ -2.19
HDAC3O15379 DEFB108E-201ENST00000524692 240 ntBASIC1.37□□□□□ -2.19
HDAC3O15379 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.37□□□□□ -2.19
HDAC3O15379 SNORD53B-201ENST00000577887 78 ntBASIC1.37□□□□□ -2.19
HDAC3O15379 MIR4769-201ENST00000584126 77 ntBASIC1.37□□□□□ -2.19
HDAC3O15379 MIR3149-201ENST00000584629 83 ntBASIC1.37□□□□□ -2.19
HDAC3O15379 DEFB117-201ENST00000602356 141 ntBASIC1.37□□□□□ -2.19
HDAC3O15379 AC005828.6-201ENST00000606610 232 ntBASIC1.37□□□□□ -2.19
HDAC3O15379 AL353149.1-201ENST00000610667 244 ntBASIC1.37□□□□□ -2.19
HDAC3O15379 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.37□□□□□ -2.19
HDAC3O15379 AC010615.1-201ENST00000594254 1764 ntBASIC1.36□□□□□ -2.19
HDAC3O15379 RNU6-661P-201ENST00000362409 107 ntBASIC1.36□□□□□ -2.19
HDAC3O15379 Y_RNA.172-201ENST00000363765 102 ntBASIC1.36□□□□□ -2.19
HDAC3O15379 Y_RNA.237-201ENST00000364439 102 ntBASIC1.36□□□□□ -2.19
HDAC3O15379 Y_RNA.329-201ENST00000365209 107 ntBASIC1.36□□□□□ -2.19
HDAC3O15379 Y_RNA.361-201ENST00000365515 120 ntBASIC1.36□□□□□ -2.19
HDAC3O15379 Y_RNA.383-201ENST00000383855 97 ntBASIC1.36□□□□□ -2.19
HDAC3O15379 RNU6-1310P-201ENST00000384153 107 ntBASIC1.36□□□□□ -2.19
HDAC3O15379 Y_RNA.452-201ENST00000384202 108 ntBASIC1.36□□□□□ -2.19
HDAC3O15379 RNU6-21P-201ENST00000384710 107 ntBASIC1.36□□□□□ -2.19
HDAC3O15379 RNU6-417P-201ENST00000384712 107 ntBASIC1.36□□□□□ -2.19
HDAC3O15379 MIR758-201ENST00000390227 88 ntBASIC1.36□□□□□ -2.19
HDAC3O15379 SNORA67.6-201ENST00000391093 99 ntBASIC1.36□□□□□ -2.19
HDAC3O15379 AL031003.1-201ENST00000404229 172 ntBASIC1.36□□□□□ -2.19
HDAC3O15379 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.36□□□□□ -2.19
HDAC3O15379 SNRPGP13-201ENST00000442212 177 ntBASIC1.36□□□□□ -2.19
HDAC3O15379 AC005042.3-201ENST00000453230 174 ntBASIC1.36□□□□□ -2.19
HDAC3O15379 TRBVB-201ENST00000477100 408 ntBASIC1.36□□□□□ -2.19
HDAC3O15379 MTND1P19-201ENST00000511780 315 ntBASIC1.36□□□□□ -2.19
HDAC3O15379 RNU6-1143P-201ENST00000516125 104 ntBASIC1.36□□□□□ -2.19
HDAC3O15379 SCARNA24.2-201ENST00000516968 130 ntBASIC1.36□□□□□ -2.19
HDAC3O15379 SUMO2P18-201ENST00000518873 252 ntBASIC1.36□□□□□ -2.19
HDAC3O15379 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.36□□□□□ -2.19
HDAC3O15379 AC023157.2-201ENST00000540596 141 ntBASIC1.36□□□□□ -2.19
HDAC3O15379 AC010900.2-201ENST00000604508 210 ntBASIC1.36□□□□□ -2.19
HDAC3O15379 SNORD113-5-201ENST00000607261 78 ntBASIC1.36□□□□□ -2.19
HDAC3O15379 AL353997.5-201ENST00000618886 171 ntBASIC1.36□□□□□ -2.19
HDAC3O15379 U6.108-201ENST00000637764 58 ntBASIC1.36□□□□□ -2.19
HDAC3O15379 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
HDAC3O15379 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.35□□□□□ -2.19
HDAC3O15379 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HDAC3O15379 RNU4-80P-201ENST00000363200 141 ntBASIC1.35□□□□□ -2.19
HDAC3O15379 RNU6-1240P-201ENST00000365155 104 ntBASIC1.35□□□□□ -2.19
HDAC3O15379 RNU6-290P-201ENST00000365212 101 ntBASIC1.35□□□□□ -2.19
HDAC3O15379 SNORA48.1-201ENST00000390879 135 ntBASIC1.35□□□□□ -2.19
HDAC3O15379 RNA5SP467-201ENST00000391274 118 ntBASIC1.35□□□□□ -2.19
HDAC3O15379 MIR1302-6-201ENST00000408466 90 ntBASIC1.35□□□□□ -2.19
HDAC3O15379 AC008134.1-201ENST00000420943 193 ntBASIC1.35□□□□□ -2.19
HDAC3O15379 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.35□□□□□ -2.19
HDAC3O15379 AC245047.4-201ENST00000433189 144 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 711.5 ms