Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
MBD3L3A6NE82 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
MBD3L3A6NE82 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
MBD3L3A6NE82 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
MBD3L3A6NE82 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
MBD3L3A6NE82 Y_RNA.122-201ENST00000363331 96 ntBASIC2.13□□□□□ -2.07
MBD3L3A6NE82 U8.7-201ENST00000364940 136 ntBASIC2.13□□□□□ -2.07
MBD3L3A6NE82 RNU6-338P-201ENST00000383888 105 ntBASIC2.13□□□□□ -2.07
MBD3L3A6NE82 RNU6-1323P-201ENST00000384025 107 ntBASIC2.13□□□□□ -2.07
MBD3L3A6NE82 MIR504-201ENST00000385065 83 ntBASIC2.13□□□□□ -2.07
MBD3L3A6NE82 RNA5SP109-201ENST00000391010 116 ntBASIC2.13□□□□□ -2.07
MBD3L3A6NE82 RNA5SP425-201ENST00000410336 112 ntBASIC2.13□□□□□ -2.07
MBD3L3A6NE82 AC245047.3-201ENST00000429428 127 ntBASIC2.13□□□□□ -2.07
MBD3L3A6NE82 RPL23AP54-201ENST00000495129 419 ntBASIC2.13□□□□□ -2.07
MBD3L3A6NE82 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.13□□□□□ -2.07
MBD3L3A6NE82 SUB1P4-201ENST00000566062 339 ntBASIC2.13□□□□□ -2.07
MBD3L3A6NE82 MIR4287-201ENST00000579398 78 ntBASIC2.13□□□□□ -2.07
MBD3L3A6NE82 AC005357.1-201ENST00000588399 301 ntBASIC2.13□□□□□ -2.07
MBD3L3A6NE82 AC013791.1-201ENST00000616619 62 ntBASIC2.13□□□□□ -2.07
MBD3L3A6NE82 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.13□□□□□ -2.07
MBD3L3A6NE82 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
MBD3L3A6NE82 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
MBD3L3A6NE82 RNU6-1205P-201ENST00000363625 106 ntBASIC2.12□□□□□ -2.07
MBD3L3A6NE82 Y_RNA.293-201ENST00000364908 93 ntBASIC2.12□□□□□ -2.07
MBD3L3A6NE82 MIR520A-201ENST00000384862 85 ntBASIC2.12□□□□□ -2.07
MBD3L3A6NE82 Z98742.3-201ENST00000418637 326 ntBASIC2.12□□□□□ -2.07
MBD3L3A6NE82 AL606517.2-201ENST00000442855 241 ntBASIC2.12□□□□□ -2.07
MBD3L3A6NE82 RPS27AP9-201ENST00000477681 438 ntBASIC2.12□□□□□ -2.07
MBD3L3A6NE82 AC026436.1-201ENST00000510537 270 ntBASIC2.12□□□□□ -2.07
MBD3L3A6NE82 RNA5SP76-201ENST00000516277 87 ntBASIC2.12□□□□□ -2.07
MBD3L3A6NE82 RNU6-826P-201ENST00000516827 104 ntBASIC2.12□□□□□ -2.07
MBD3L3A6NE82 RNU6-341P-201ENST00000516973 96 ntBASIC2.12□□□□□ -2.07
MBD3L3A6NE82 AC011604.1-201ENST00000545978 196 ntBASIC2.12□□□□□ -2.07
MBD3L3A6NE82 MIR5692C2-201ENST00000577959 77 ntBASIC2.12□□□□□ -2.07
MBD3L3A6NE82 AC091178.2-201ENST00000584401 117 ntBASIC2.12□□□□□ -2.07
MBD3L3A6NE82 AP003357.1-201ENST00000604497 148 ntBASIC2.12□□□□□ -2.07
MBD3L3A6NE82 AC046143.2-201ENST00000609789 160 ntBASIC2.12□□□□□ -2.07
MBD3L3A6NE82 AL442067.1-201ENST00000613261 223 ntBASIC2.12□□□□□ -2.07
MBD3L3A6NE82 AC073349.3-201ENST00000617616 186 ntBASIC2.12□□□□□ -2.07
MBD3L3A6NE82 AC078938.1-201ENST00000620993 318 ntBASIC2.12□□□□□ -2.07
MBD3L3A6NE82 MIR203B-201ENST00000636080 86 ntBASIC2.12□□□□□ -2.07
MBD3L3A6NE82 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.12□□□□□ -2.07
MBD3L3A6NE82 Y_RNA.76-201ENST00000362931 109 ntBASIC2.11□□□□□ -2.07
MBD3L3A6NE82 Y_RNA.552-201ENST00000384665 112 ntBASIC2.11□□□□□ -2.07
MBD3L3A6NE82 MIR562-201ENST00000384894 95 ntBASIC2.11□□□□□ -2.07
MBD3L3A6NE82 RPS12P2-201ENST00000439728 269 ntBASIC2.11□□□□□ -2.07
MBD3L3A6NE82 SNORD2.1-201ENST00000458762 69 ntBASIC2.11□□□□□ -2.07
MBD3L3A6NE82 Y_RNA.638-201ENST00000459374 113 ntBASIC2.11□□□□□ -2.07
MBD3L3A6NE82 SNORD116-28-201ENST00000516123 91 ntBASIC2.11□□□□□ -2.07
MBD3L3A6NE82 RNU4-71P-201ENST00000516258 113 ntBASIC2.11□□□□□ -2.07
MBD3L3A6NE82 RNU2-56P-201ENST00000516826 190 ntBASIC2.11□□□□□ -2.07
MBD3L3A6NE82 AC127455.1-201ENST00000565496 145 ntBASIC2.11□□□□□ -2.07
MBD3L3A6NE82 MIR3671-201ENST00000580455 88 ntBASIC2.11□□□□□ -2.07
MBD3L3A6NE82 MIR4524B-201ENST00000581569 115 ntBASIC2.11□□□□□ -2.07
MBD3L3A6NE82 AC022217.4-201ENST00000604389 163 ntBASIC2.11□□□□□ -2.07
MBD3L3A6NE82 AC067747.1-201ENST00000608026 250 ntBASIC2.11□□□□□ -2.07
MBD3L3A6NE82 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
MBD3L3A6NE82 AC080100.1-201ENST00000624239 5356 ntBASIC2.1□□□□□ -2.07
MBD3L3A6NE82 Z82195.2-201ENST00000612348 18351 ntBASIC2.1□□□□□ -2.07
MBD3L3A6NE82 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
MBD3L3A6NE82 RNU6-112P-201ENST00000363599 104 ntBASIC2.1□□□□□ -2.07
MBD3L3A6NE82 SNORA72-201ENST00000384339 132 ntBASIC2.1□□□□□ -2.07
MBD3L3A6NE82 Y_RNA.515-201ENST00000384535 112 ntBASIC2.1□□□□□ -2.07
MBD3L3A6NE82 SNORA36B-201ENST00000410438 131 ntBASIC2.1□□□□□ -2.07
MBD3L3A6NE82 snoU13.15-201ENST00000459407 104 ntBASIC2.1□□□□□ -2.07
MBD3L3A6NE82 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.1□□□□□ -2.07
MBD3L3A6NE82 RNA5SP281-201ENST00000516504 135 ntBASIC2.1□□□□□ -2.07
MBD3L3A6NE82 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.1□□□□□ -2.07
MBD3L3A6NE82 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.1□□□□□ -2.07
MBD3L3A6NE82 MIR5007-201ENST00000583098 95 ntBASIC2.1□□□□□ -2.07
MBD3L3A6NE82 MIR4282-201ENST00000583613 67 ntBASIC2.1□□□□□ -2.07
MBD3L3A6NE82 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.1□□□□□ -2.07
MBD3L3A6NE82 AC090425.1-201ENST00000610007 140 ntBASIC2.1□□□□□ -2.07
MBD3L3A6NE82 Y_RNA.292-201ENST00000364904 97 ntBASIC2.09□□□□□ -2.07
MBD3L3A6NE82 RNU6-1080P-201ENST00000383982 107 ntBASIC2.09□□□□□ -2.07
MBD3L3A6NE82 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
MBD3L3A6NE82 AL512604.1-201ENST00000404812 257 ntBASIC2.09□□□□□ -2.07
MBD3L3A6NE82 AL355497.1-201ENST00000406262 551 ntBASIC2.09□□□□□ -2.07
MBD3L3A6NE82 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.09□□□□□ -2.07
MBD3L3A6NE82 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.09□□□□□ -2.07
MBD3L3A6NE82 RN7SKP223-201ENST00000410582 62 ntBASIC2.09□□□□□ -2.07
MBD3L3A6NE82 RNA5SP100-201ENST00000410903 110 ntBASIC2.09□□□□□ -2.07
MBD3L3A6NE82 RNA5SP59-201ENST00000410922 110 ntBASIC2.09□□□□□ -2.07
MBD3L3A6NE82 RPL23AP63-201ENST00000498752 471 ntBASIC2.09□□□□□ -2.07
MBD3L3A6NE82 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.09□□□□□ -2.07
MBD3L3A6NE82 MIR4769-201ENST00000584126 77 ntBASIC2.09□□□□□ -2.07
MBD3L3A6NE82 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.09□□□□□ -2.07
MBD3L3A6NE82 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.09□□□□□ -2.07
MBD3L3A6NE82 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.09□□□□□ -2.07
MBD3L3A6NE82 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
MBD3L3A6NE82 AC100821.1-201ENST00000523153 2479 ntBASIC2.09□□□□□ -2.08
MBD3L3A6NE82 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.09□□□□□ -2.08
MBD3L3A6NE82 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
MBD3L3A6NE82 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
MBD3L3A6NE82 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
MBD3L3A6NE82 SNORA63D-201ENST00000364359 132 ntBASIC2.08□□□□□ -2.08
MBD3L3A6NE82 SNORD114-30-201ENST00000364448 72 ntBASIC2.08□□□□□ -2.08
MBD3L3A6NE82 AL158823.1-201ENST00000418441 478 ntBASIC2.08□□□□□ -2.08
MBD3L3A6NE82 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.08□□□□□ -2.08
MBD3L3A6NE82 RPS27P1-201ENST00000450552 247 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms