Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 RNU6-341P-201ENST00000516973 96 ntBASIC0.96□□□□□ -2.26
ITCHQ96J02 MIR4778-201ENST00000577635 80 ntBASIC0.96□□□□□ -2.26
ITCHQ96J02 AL513534.2-201ENST00000603836 250 ntBASIC0.96□□□□□ -2.26
ITCHQ96J02 PVT1_3.1-201ENST00000620853 95 ntBASIC0.96□□□□□ -2.26
ITCHQ96J02 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
ITCHQ96J02 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.95□□□□□ -2.26
ITCHQ96J02 SNORD114-27-201ENST00000363766 70 ntBASIC0.95□□□□□ -2.26
ITCHQ96J02 RNU1-124P-201ENST00000363861 145 ntBASIC0.95□□□□□ -2.26
ITCHQ96J02 Y_RNA.267-201ENST00000364679 109 ntBASIC0.95□□□□□ -2.26
ITCHQ96J02 RNU6-767P-201ENST00000384132 107 ntBASIC0.95□□□□□ -2.26
ITCHQ96J02 RNU6-318P-201ENST00000384283 103 ntBASIC0.95□□□□□ -2.26
ITCHQ96J02 RNU6-376P-201ENST00000384731 106 ntBASIC0.95□□□□□ -2.26
ITCHQ96J02 RNU6-192P-201ENST00000391253 100 ntBASIC0.95□□□□□ -2.26
ITCHQ96J02 SNORA75.4-201ENST00000391278 119 ntBASIC0.95□□□□□ -2.26
ITCHQ96J02 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.95□□□□□ -2.26
ITCHQ96J02 RAB28P5-201ENST00000427490 651 ntBASIC0.95□□□□□ -2.26
ITCHQ96J02 RPL23AP50-201ENST00000434149 455 ntBASIC0.95□□□□□ -2.26
ITCHQ96J02 DYNLT3P2-201ENST00000442517 295 ntBASIC0.95□□□□□ -2.26
ITCHQ96J02 FGF7P6-202ENST00000451282 293 ntBASIC0.95□□□□□ -2.26
ITCHQ96J02 AC087343.1-201ENST00000477341 475 ntBASIC0.95□□□□□ -2.26
ITCHQ96J02 SNORA40.9-201ENST00000515895 93 ntBASIC0.95□□□□□ -2.26
ITCHQ96J02 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.95□□□□□ -2.26
ITCHQ96J02 RNU6-1278P-201ENST00000516130 107 ntBASIC0.95□□□□□ -2.26
ITCHQ96J02 RNA5SP168-201ENST00000516642 112 ntBASIC0.95□□□□□ -2.26
ITCHQ96J02 RNU6-922P-201ENST00000516753 99 ntBASIC0.95□□□□□ -2.26
ITCHQ96J02 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.95□□□□□ -2.26
ITCHQ96J02 AP002001.1-203ENST00000534002 267 ntBASIC0.95□□□□□ -2.26
ITCHQ96J02 AC091178.2-201ENST00000584401 117 ntBASIC0.95□□□□□ -2.26
ITCHQ96J02 HSPE1P19-201ENST00000603327 295 ntBASIC0.95□□□□□ -2.26
ITCHQ96J02 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.95□□□□□ -2.26
ITCHQ96J02 U6.115-201ENST00000636045 103 ntBASIC0.95□□□□□ -2.26
ITCHQ96J02 MIR3674-201ENST00000636576 68 ntBASIC0.95□□□□□ -2.26
ITCHQ96J02 RNU6-199P-201ENST00000362954 107 ntBASIC0.94□□□□□ -2.26
ITCHQ96J02 RNU4-38P-201ENST00000364472 129 ntBASIC0.94□□□□□ -2.26
ITCHQ96J02 RNU6-424P-201ENST00000384367 105 ntBASIC0.94□□□□□ -2.26
ITCHQ96J02 MIR873-201ENST00000401120 77 ntBASIC0.94□□□□□ -2.26
ITCHQ96J02 RNA5SP475-201ENST00000410568 110 ntBASIC0.94□□□□□ -2.26
ITCHQ96J02 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.94□□□□□ -2.26
ITCHQ96J02 CALM2P4-201ENST00000430810 426 ntBASIC0.94□□□□□ -2.26
ITCHQ96J02 AL137792.2-201ENST00000443484 235 ntBASIC0.94□□□□□ -2.26
ITCHQ96J02 RPS29P1-201ENST00000465274 159 ntBASIC0.94□□□□□ -2.26
ITCHQ96J02 COX6CP14-201ENST00000469580 174 ntBASIC0.94□□□□□ -2.26
ITCHQ96J02 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.94□□□□□ -2.26
ITCHQ96J02 OR9P1P-201ENST00000496431 281 ntBASIC0.94□□□□□ -2.26
ITCHQ96J02 RNU7-28P-201ENST00000516759 62 ntBASIC0.94□□□□□ -2.26
ITCHQ96J02 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.94□□□□□ -2.26
ITCHQ96J02 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.94□□□□□ -2.26
ITCHQ96J02 MIR1244-1-201ENST00000612829 85 ntBASIC0.94□□□□□ -2.26
ITCHQ96J02 MIR1244-3-201ENST00000635744 85 ntBASIC0.94□□□□□ -2.26
ITCHQ96J02 MIR1244-2-201ENST00000636449 85 ntBASIC0.94□□□□□ -2.26
ITCHQ96J02 MIR1244-4-202ENST00000636813 85 ntBASIC0.94□□□□□ -2.26
ITCHQ96J02 AL391516.1-201ENST00000554380 2449 ntBASIC0.94□□□□□ -2.26
ITCHQ96J02 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
ITCHQ96J02 SNORA1B-201ENST00000362535 133 ntBASIC0.93□□□□□ -2.26
ITCHQ96J02 RNU6-454P-201ENST00000364292 107 ntBASIC0.93□□□□□ -2.26
ITCHQ96J02 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.93□□□□□ -2.26
ITCHQ96J02 SNORA25-201ENST00000384384 134 ntBASIC0.93□□□□□ -2.26
ITCHQ96J02 U8.16-201ENST00000391279 133 ntBASIC0.93□□□□□ -2.26
ITCHQ96J02 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.93□□□□□ -2.26
ITCHQ96J02 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.93□□□□□ -2.26
ITCHQ96J02 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.93□□□□□ -2.26
ITCHQ96J02 AP002004.2-201ENST00000531656 154 ntBASIC0.93□□□□□ -2.26
ITCHQ96J02 FAM106DP-201ENST00000586416 501 ntBASIC0.93□□□□□ -2.26
ITCHQ96J02 AC080078.2-201ENST00000603766 501 ntBASIC0.93□□□□□ -2.26
ITCHQ96J02 AC005828.6-201ENST00000606610 232 ntBASIC0.93□□□□□ -2.26
ITCHQ96J02 GHRLOS.1-201ENST00000610995 70 ntBASIC0.93□□□□□ -2.26
ITCHQ96J02 AL669831.3-213ENST00000636676 183 ntBASIC0.93□□□□□ -2.26
ITCHQ96J02 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.93□□□□□ -2.26
ITCHQ96J02 CASC19-280ENST00000642102 1351 ntBASIC0.93□□□□□ -2.26
ITCHQ96J02 RNU6-1301P-201ENST00000362724 104 ntBASIC0.92□□□□□ -2.26
ITCHQ96J02 MIR653-201ENST00000385279 96 ntBASIC0.92□□□□□ -2.26
ITCHQ96J02 SNORD12B-201ENST00000410433 91 ntBASIC0.92□□□□□ -2.26
ITCHQ96J02 AC114482.1-201ENST00000418010 247 ntBASIC0.92□□□□□ -2.26
ITCHQ96J02 SUMO1P2-201ENST00000452524 304 ntBASIC0.92□□□□□ -2.26
ITCHQ96J02 MIR2053-201ENST00000459295 91 ntBASIC0.92□□□□□ -2.26
ITCHQ96J02 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.92□□□□□ -2.26
ITCHQ96J02 RNU6-1291P-201ENST00000516591 104 ntBASIC0.92□□□□□ -2.26
ITCHQ96J02 RNU6-1213P-201ENST00000517075 94 ntBASIC0.92□□□□□ -2.26
ITCHQ96J02 MIR2355-201ENST00000517199 87 ntBASIC0.92□□□□□ -2.26
ITCHQ96J02 AL022345.2-201ENST00000606307 135 ntBASIC0.92□□□□□ -2.26
ITCHQ96J02 BX284668.6-201ENST00000606899 438 ntBASIC0.92□□□□□ -2.26
ITCHQ96J02 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.92□□□□□ -2.26
ITCHQ96J02 AC127459.3-201ENST00000624328 466 ntBASIC0.92□□□□□ -2.26
ITCHQ96J02 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.92□□□□□ -2.26
ITCHQ96J02 AC005592.1-201ENST00000566527 1640 ntBASIC0.91□□□□□ -2.26
ITCHQ96J02 RNU6-845P-201ENST00000362578 103 ntBASIC0.91□□□□□ -2.26
ITCHQ96J02 Y_RNA.124-201ENST00000363339 93 ntBASIC0.91□□□□□ -2.26
ITCHQ96J02 Y_RNA.160-201ENST00000363677 92 ntBASIC0.91□□□□□ -2.26
ITCHQ96J02 Y_RNA.166-201ENST00000363730 102 ntBASIC0.91□□□□□ -2.26
ITCHQ96J02 RNU6-99P-201ENST00000364721 107 ntBASIC0.91□□□□□ -2.26
ITCHQ96J02 Y_RNA.279-201ENST00000364763 95 ntBASIC0.91□□□□□ -2.26
ITCHQ96J02 RNU6-1187P-201ENST00000364771 110 ntBASIC0.91□□□□□ -2.26
ITCHQ96J02 RNU6-117P-201ENST00000365415 107 ntBASIC0.91□□□□□ -2.26
ITCHQ96J02 RNU6-1310P-201ENST00000384153 107 ntBASIC0.91□□□□□ -2.26
ITCHQ96J02 MIR520G-201ENST00000385064 90 ntBASIC0.91□□□□□ -2.26
ITCHQ96J02 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
ITCHQ96J02 RNA5SP482-201ENST00000391269 118 ntBASIC0.91□□□□□ -2.26
ITCHQ96J02 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.91□□□□□ -2.26
ITCHQ96J02 MTND4P17-201ENST00000470444 350 ntBASIC0.91□□□□□ -2.26
ITCHQ96J02 AC105758.1-201ENST00000506038 399 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms