Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AL355796.1-201ENST00000406706 323 ntBASIC2.24□□□□□ -2.05
HOXD12P35452 MIR1283-2-201ENST00000408621 87 ntBASIC2.24□□□□□ -2.05
HOXD12P35452 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.24□□□□□ -2.05
HOXD12P35452 AP005660.1-201ENST00000522972 293 ntBASIC2.24□□□□□ -2.05
HOXD12P35452 AC087441.2-201ENST00000529141 262 ntBASIC2.24□□□□□ -2.05
HOXD12P35452 AC005357.1-201ENST00000588399 301 ntBASIC2.24□□□□□ -2.05
HOXD12P35452 AC090425.1-201ENST00000610007 140 ntBASIC2.24□□□□□ -2.05
HOXD12P35452 U2.14-201ENST00000615943 113 ntBASIC2.24□□□□□ -2.05
HOXD12P35452 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
HOXD12P35452 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
HOXD12P35452 RNU6-1164P-201ENST00000364428 107 ntBASIC2.23□□□□□ -2.05
HOXD12P35452 AC016909.1-201ENST00000415916 166 ntBASIC2.23□□□□□ -2.05
HOXD12P35452 AC024067.1-201ENST00000426199 223 ntBASIC2.23□□□□□ -2.05
HOXD12P35452 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HOXD12P35452 HMGN2P23-201ENST00000456759 269 ntBASIC2.23□□□□□ -2.05
HOXD12P35452 AC091959.1-201ENST00000495857 238 ntBASIC2.23□□□□□ -2.05
HOXD12P35452 AC010598.1-201ENST00000510378 103 ntBASIC2.23□□□□□ -2.05
HOXD12P35452 RNU6-191P-201ENST00000516295 94 ntBASIC2.23□□□□□ -2.05
HOXD12P35452 RNA5SP200-201ENST00000516360 103 ntBASIC2.23□□□□□ -2.05
HOXD12P35452 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.23□□□□□ -2.05
HOXD12P35452 MIR4299-201ENST00000577899 72 ntBASIC2.23□□□□□ -2.05
HOXD12P35452 AC005828.6-201ENST00000606610 232 ntBASIC2.23□□□□□ -2.05
HOXD12P35452 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.23□□□□□ -2.05
HOXD12P35452 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HOXD12P35452 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HOXD12P35452 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
HOXD12P35452 Y_RNA.65-201ENST00000362846 100 ntBASIC2.22□□□□□ -2.05
HOXD12P35452 SNORD114-6-201ENST00000364393 72 ntBASIC2.22□□□□□ -2.05
HOXD12P35452 SNORA26.9-201ENST00000391322 122 ntBASIC2.22□□□□□ -2.05
HOXD12P35452 SNORA11.4-201ENST00000408823 129 ntBASIC2.22□□□□□ -2.05
HOXD12P35452 SUMO1P2-201ENST00000452524 304 ntBASIC2.22□□□□□ -2.05
HOXD12P35452 SNORA27.4-201ENST00000516650 95 ntBASIC2.22□□□□□ -2.05
HOXD12P35452 RNU6-856P-201ENST00000516959 98 ntBASIC2.22□□□□□ -2.05
HOXD12P35452 AL096840.1-201ENST00000603287 93 ntBASIC2.22□□□□□ -2.05
HOXD12P35452 CENPCP1-201ENST00000533085 2578 ntBASIC2.21□□□□□ -2.06
HOXD12P35452 Y_RNA.20-201ENST00000362479 113 ntBASIC2.21□□□□□ -2.06
HOXD12P35452 RNA5SP99-201ENST00000364020 114 ntBASIC2.21□□□□□ -2.06
HOXD12P35452 Y_RNA.539-201ENST00000384635 107 ntBASIC2.21□□□□□ -2.06
HOXD12P35452 SNORA64-201ENST00000384674 134 ntBASIC2.21□□□□□ -2.06
HOXD12P35452 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
HOXD12P35452 RNU6-1248P-201ENST00000391096 64 ntBASIC2.21□□□□□ -2.06
HOXD12P35452 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.21□□□□□ -2.06
HOXD12P35452 AC244636.1-201ENST00000421152 228 ntBASIC2.21□□□□□ -2.06
HOXD12P35452 AC060773.1-201ENST00000421698 310 ntBASIC2.21□□□□□ -2.06
HOXD12P35452 AC018634.1-201ENST00000437554 401 ntBASIC2.21□□□□□ -2.06
HOXD12P35452 SNORA70.12-201ENST00000516084 153 ntBASIC2.21□□□□□ -2.06
HOXD12P35452 RNU6-111P-201ENST00000517179 105 ntBASIC2.21□□□□□ -2.06
HOXD12P35452 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.21□□□□□ -2.06
HOXD12P35452 BX284668.6-201ENST00000606899 438 ntBASIC2.21□□□□□ -2.06
HOXD12P35452 MIR6766-201ENST00000622641 72 ntBASIC2.21□□□□□ -2.06
HOXD12P35452 AL359851.1-201ENST00000569460 4997 ntBASIC2.21□□□□□ -2.06
HOXD12P35452 AL159152.1-201ENST00000635019 2587 ntBASIC2.21□□□□□ -2.06
HOXD12P35452 MIRLET7G-201ENST00000362280 84 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 SNORA27.1-201ENST00000362604 124 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 RNU6-23P-201ENST00000363283 107 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 Y_RNA.124-201ENST00000363339 93 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 RNU6-740P-201ENST00000364734 105 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 RNU6-407P-201ENST00000365280 104 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 RNU6-1318P-201ENST00000365389 103 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 RNA5SP37-201ENST00000365420 130 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 Y_RNA.361-201ENST00000365515 120 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 RNU6-338P-201ENST00000383888 105 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 RNU6-662P-201ENST00000384253 104 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 SNORA8-201ENST00000384574 139 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 MIR221-201ENST00000385135 110 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 MIR873-201ENST00000401120 77 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 MIR1253-201ENST00000408273 105 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 RNU6-710P-201ENST00000410424 105 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 RNU2-61P-201ENST00000411069 191 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 RPS15AP28-201ENST00000435088 386 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.2□□□□□ -2.06
HOXD12P35452 MIR4643-201ENST00000577473 78 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 U2.15-201ENST00000611544 191 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 U2.16-201ENST00000613119 191 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 U2.12-201ENST00000613778 191 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 U2.20-201ENST00000613956 192 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 U2.9-201ENST00000615427 191 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 U2.11-201ENST00000616345 191 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 U2.2-201ENST00000616535 191 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 U2.3-201ENST00000617785 191 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 U2.19-201ENST00000618602 191 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 RNU2-1-201ENST00000618664 191 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 U2.6-201ENST00000619225 191 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 U2.5-201ENST00000619465 191 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 U2.10-201ENST00000620268 191 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 AC078938.1-201ENST00000620993 318 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.2□□□□□ -2.06
HOXD12P35452 UBE2WP1-201ENST00000362030 340 ntBASIC2.19□□□□□ -2.06
HOXD12P35452 Y_RNA.117-201ENST00000363294 101 ntBASIC2.19□□□□□ -2.06
HOXD12P35452 Y_RNA.275-201ENST00000364726 110 ntBASIC2.19□□□□□ -2.06
HOXD12P35452 SNORA48.3-201ENST00000391081 134 ntBASIC2.19□□□□□ -2.06
HOXD12P35452 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.19□□□□□ -2.06
HOXD12P35452 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.19□□□□□ -2.06
HOXD12P35452 HMGN2P19-201ENST00000425149 265 ntBASIC2.19□□□□□ -2.06
HOXD12P35452 RNU1-131P-201ENST00000458943 161 ntBASIC2.19□□□□□ -2.06
HOXD12P35452 RNA5SP57-201ENST00000459463 123 ntBASIC2.19□□□□□ -2.06
HOXD12P35452 AC011406.1-201ENST00000512440 370 ntBASIC2.19□□□□□ -2.06
HOXD12P35452 RNA5SP20-201ENST00000515976 84 ntBASIC2.19□□□□□ -2.06
HOXD12P35452 SCARNA16.3-201ENST00000516595 184 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 222.1 ms