Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC018630.2-201ENST00000534866 2403 ntBASIC1.65□□□□□ -2.15
TO15178 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TO15178 RNU6-414P-201ENST00000363705 104 ntBASIC1.64□□□□□ -2.15
TO15178 RNU6-450P-201ENST00000364654 107 ntBASIC1.64□□□□□ -2.15
TO15178 RNA5SP109-201ENST00000391010 116 ntBASIC1.64□□□□□ -2.15
TO15178 COX6CP10-201ENST00000416832 224 ntBASIC1.64□□□□□ -2.15
TO15178 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.64□□□□□ -2.15
TO15178 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.64□□□□□ -2.15
TO15178 snoU13.27-201ENST00000459278 104 ntBASIC1.64□□□□□ -2.15
TO15178 AC025465.3-201ENST00000510570 311 ntBASIC1.64□□□□□ -2.15
TO15178 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TO15178 MIR4419B-201ENST00000577260 68 ntBASIC1.64□□□□□ -2.15
TO15178 PART1_1.1-201ENST00000611761 217 ntBASIC1.64□□□□□ -2.15
TO15178 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.64□□□□□ -2.15
TO15178 Y_RNA.124-201ENST00000363339 93 ntBASIC1.63□□□□□ -2.15
TO15178 Y_RNA.331-201ENST00000365267 102 ntBASIC1.63□□□□□ -2.15
TO15178 SNORA33.2-201ENST00000365413 134 ntBASIC1.63□□□□□ -2.15
TO15178 Y_RNA.455-201ENST00000384230 98 ntBASIC1.63□□□□□ -2.15
TO15178 RNU6-937P-201ENST00000384325 106 ntBASIC1.63□□□□□ -2.15
TO15178 RNU6-21P-201ENST00000384710 107 ntBASIC1.63□□□□□ -2.15
TO15178 RNU6-376P-201ENST00000384731 106 ntBASIC1.63□□□□□ -2.15
TO15178 MIR562-201ENST00000384894 95 ntBASIC1.63□□□□□ -2.15
TO15178 MIR1289-2-201ENST00000408360 111 ntBASIC1.63□□□□□ -2.15
TO15178 RNU6-130P-201ENST00000411112 103 ntBASIC1.63□□□□□ -2.15
TO15178 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.63□□□□□ -2.15
TO15178 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.63□□□□□ -2.15
TO15178 RPS27P1-201ENST00000450552 247 ntBASIC1.63□□□□□ -2.15
TO15178 HSPE1P13-201ENST00000451143 297 ntBASIC1.63□□□□□ -2.15
TO15178 RNU6-436P-201ENST00000516171 114 ntBASIC1.63□□□□□ -2.15
TO15178 MIR8074-201ENST00000615081 81 ntBASIC1.63□□□□□ -2.15
TO15178 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.63□□□□□ -2.15
TO15178 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.63□□□□□ -2.15
TO15178 Y_RNA.183-201ENST00000363882 113 ntBASIC1.62□□□□□ -2.15
TO15178 RNU6-639P-201ENST00000384074 107 ntBASIC1.62□□□□□ -2.15
TO15178 RNU6-505P-201ENST00000384427 107 ntBASIC1.62□□□□□ -2.15
TO15178 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
TO15178 RPL21P1-201ENST00000399532 476 ntBASIC1.62□□□□□ -2.15
TO15178 AC245047.3-201ENST00000429428 127 ntBASIC1.62□□□□□ -2.15
TO15178 SEPT14P8-201ENST00000508026 178 ntBASIC1.62□□□□□ -2.15
TO15178 AL442663.2-201ENST00000554385 511 ntBASIC1.62□□□□□ -2.15
TO15178 MIR3618-201ENST00000580330 88 ntBASIC1.62□□□□□ -2.15
TO15178 MIR4680-201ENST00000580906 66 ntBASIC1.62□□□□□ -2.15
TO15178 AC022217.4-201ENST00000604389 163 ntBASIC1.62□□□□□ -2.15
TO15178 AC084768.2-201ENST00000622736 221 ntBASIC1.62□□□□□ -2.15
TO15178 MIR6079-201ENST00000635807 62 ntBASIC1.62□□□□□ -2.15
TO15178 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
TO15178 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
TO15178 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.61□□□□□ -2.15
TO15178 Y_RNA.152-201ENST00000363578 100 ntBASIC1.61□□□□□ -2.15
TO15178 RNU6-117P-201ENST00000365415 107 ntBASIC1.61□□□□□ -2.15
TO15178 Y_RNA.422-201ENST00000384054 114 ntBASIC1.61□□□□□ -2.15
TO15178 RNU6-439P-201ENST00000384188 106 ntBASIC1.61□□□□□ -2.15
TO15178 Y_RNA.527-201ENST00000384573 102 ntBASIC1.61□□□□□ -2.15
TO15178 MIR504-201ENST00000385065 83 ntBASIC1.61□□□□□ -2.15
TO15178 RN7SKP200-201ENST00000410564 320 ntBASIC1.61□□□□□ -2.15
TO15178 RNU2-61P-201ENST00000411069 191 ntBASIC1.61□□□□□ -2.15
TO15178 AL606517.2-201ENST00000442855 241 ntBASIC1.61□□□□□ -2.15
TO15178 RNU6-397P-201ENST00000516226 104 ntBASIC1.61□□□□□ -2.15
TO15178 RNU6-966P-201ENST00000516479 104 ntBASIC1.61□□□□□ -2.15
TO15178 RNU6-250P-201ENST00000516958 103 ntBASIC1.61□□□□□ -2.15
TO15178 RNU6-897P-201ENST00000517135 105 ntBASIC1.61□□□□□ -2.15
TO15178 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.61□□□□□ -2.15
TO15178 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.61□□□□□ -2.15
TO15178 MIR4709-201ENST00000577272 72 ntBASIC1.61□□□□□ -2.15
TO15178 AL355297.3-201ENST00000604082 446 ntBASIC1.61□□□□□ -2.15
TO15178 SNORD113-5-201ENST00000607261 78 ntBASIC1.61□□□□□ -2.15
TO15178 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.61□□□□□ -2.15
TO15178 Y_RNA.329-201ENST00000365209 107 ntBASIC1.6□□□□□ -2.15
TO15178 SNORA4.2-201ENST00000365313 147 ntBASIC1.6□□□□□ -2.15
TO15178 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.6□□□□□ -2.15
TO15178 RNU6-338P-201ENST00000383888 105 ntBASIC1.6□□□□□ -2.15
TO15178 MIR520G-201ENST00000385064 90 ntBASIC1.6□□□□□ -2.15
TO15178 RNU6-710P-201ENST00000410424 105 ntBASIC1.6□□□□□ -2.15
TO15178 AC024067.1-201ENST00000426199 223 ntBASIC1.6□□□□□ -2.15
TO15178 JTBP1-201ENST00000441314 247 ntBASIC1.6□□□□□ -2.15
TO15178 RNU1-98P-201ENST00000458992 160 ntBASIC1.6□□□□□ -2.15
TO15178 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.6□□□□□ -2.15
TO15178 RNU6-1337P-201ENST00000516525 95 ntBASIC1.6□□□□□ -2.15
TO15178 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
TO15178 AC113195.1-201ENST00000579952 141 ntBASIC1.6□□□□□ -2.15
TO15178 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.6□□□□□ -2.15
TO15178 RAC1P9-201ENST00000604990 392 ntBASIC1.6□□□□□ -2.15
TO15178 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.6□□□□□ -2.15
TO15178 MIR8054-201ENST00000620877 86 ntBASIC1.6□□□□□ -2.15
TO15178 AC022140.2-201ENST00000623500 188 ntBASIC1.6□□□□□ -2.15
TO15178 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.6□□□□□ -2.15
TO15178 WWP1P1-201ENST00000466609 2769 ntBASIC1.6□□□□□ -2.15
TO15178 SNORD48-201ENST00000364953 64 ntBASIC1.59□□□□□ -2.15
TO15178 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.59□□□□□ -2.15
TO15178 RNU6-1011P-201ENST00000384668 107 ntBASIC1.59□□□□□ -2.15
TO15178 RNU6-997P-201ENST00000384725 107 ntBASIC1.59□□□□□ -2.15
TO15178 RNU6-440P-201ENST00000390882 105 ntBASIC1.59□□□□□ -2.15
TO15178 MIR1267-201ENST00000408723 78 ntBASIC1.59□□□□□ -2.15
TO15178 RNU4-30P-201ENST00000410245 143 ntBASIC1.59□□□□□ -2.15
TO15178 RNU6-1046P-201ENST00000516538 107 ntBASIC1.59□□□□□ -2.15
TO15178 SNORA40.15-201ENST00000516884 107 ntBASIC1.59□□□□□ -2.15
TO15178 RNU6-341P-201ENST00000516973 96 ntBASIC1.59□□□□□ -2.15
TO15178 AC136932.1-201ENST00000574771 208 ntBASIC1.59□□□□□ -2.15
TO15178 AC024614.2-201ENST00000577584 372 ntBASIC1.59□□□□□ -2.15
TO15178 MIR3683-201ENST00000580847 82 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 209.9 ms