Protein–RNA interactions for Protein: Q9UH90

FBXO40, F-box only protein 40, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40Q9UH90 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.11□□□□□ -2.07
FBXO40Q9UH90 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
FBXO40Q9UH90 RNU1-58P-201ENST00000362413 163 ntBASIC2.1□□□□□ -2.07
FBXO40Q9UH90 Y_RNA.140-201ENST00000363474 103 ntBASIC2.1□□□□□ -2.07
FBXO40Q9UH90 Y_RNA.176-201ENST00000363815 109 ntBASIC2.1□□□□□ -2.07
FBXO40Q9UH90 Y_RNA.230-201ENST00000364348 109 ntBASIC2.1□□□□□ -2.07
FBXO40Q9UH90 Y_RNA.286-201ENST00000364813 102 ntBASIC2.1□□□□□ -2.07
FBXO40Q9UH90 RNU6-102P-201ENST00000384485 104 ntBASIC2.1□□□□□ -2.07
FBXO40Q9UH90 MIR215-201ENST00000384858 110 ntBASIC2.1□□□□□ -2.07
FBXO40Q9UH90 RNU6-1109P-201ENST00000391187 107 ntBASIC2.1□□□□□ -2.07
FBXO40Q9UH90 AC008134.1-201ENST00000420943 193 ntBASIC2.1□□□□□ -2.07
FBXO40Q9UH90 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.1□□□□□ -2.07
FBXO40Q9UH90 HMGN1P10-201ENST00000474557 553 ntBASIC2.1□□□□□ -2.07
FBXO40Q9UH90 AC011406.1-201ENST00000512440 370 ntBASIC2.1□□□□□ -2.07
FBXO40Q9UH90 SNORA25.15-201ENST00000516487 89 ntBASIC2.1□□□□□ -2.07
FBXO40Q9UH90 AC087441.2-201ENST00000529141 262 ntBASIC2.1□□□□□ -2.07
FBXO40Q9UH90 AP003733.2-201ENST00000529409 171 ntBASIC2.1□□□□□ -2.07
FBXO40Q9UH90 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.1□□□□□ -2.07
FBXO40Q9UH90 MIR4448-201ENST00000584360 86 ntBASIC2.1□□□□□ -2.07
FBXO40Q9UH90 AL096840.1-201ENST00000603287 93 ntBASIC2.1□□□□□ -2.07
FBXO40Q9UH90 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
FBXO40Q9UH90 RNU6-1240P-201ENST00000365155 104 ntBASIC2.09□□□□□ -2.07
FBXO40Q9UH90 Y_RNA.462-201ENST00000384268 102 ntBASIC2.09□□□□□ -2.07
FBXO40Q9UH90 RNU6-417P-201ENST00000384712 107 ntBASIC2.09□□□□□ -2.07
FBXO40Q9UH90 Y_RNA.574-201ENST00000384766 95 ntBASIC2.09□□□□□ -2.07
FBXO40Q9UH90 snosnR66.1-201ENST00000391095 99 ntBASIC2.09□□□□□ -2.07
FBXO40Q9UH90 MIR548F4-201ENST00000408515 105 ntBASIC2.09□□□□□ -2.07
FBXO40Q9UH90 AL358176.2-201ENST00000425769 204 ntBASIC2.09□□□□□ -2.07
FBXO40Q9UH90 ATP5J2P3-201ENST00000451550 258 ntBASIC2.09□□□□□ -2.07
FBXO40Q9UH90 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.09□□□□□ -2.07
FBXO40Q9UH90 HMGB3P17-201ENST00000504195 649 ntBASIC2.09□□□□□ -2.07
FBXO40Q9UH90 MRPS17P9-201ENST00000511924 393 ntBASIC2.09□□□□□ -2.07
FBXO40Q9UH90 SUMO2P18-201ENST00000518873 252 ntBASIC2.09□□□□□ -2.07
FBXO40Q9UH90 MIR3169-201ENST00000578032 83 ntBASIC2.09□□□□□ -2.07
FBXO40Q9UH90 AC005034.5-201ENST00000604219 466 ntBASIC2.09□□□□□ -2.07
FBXO40Q9UH90 AC022441.3-201ENST00000605737 136 ntBASIC2.09□□□□□ -2.07
FBXO40Q9UH90 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.09□□□□□ -2.07
FBXO40Q9UH90 U6.115-201ENST00000636045 103 ntBASIC2.09□□□□□ -2.07
FBXO40Q9UH90 CENPCP1-201ENST00000533085 2578 ntBASIC2.09□□□□□ -2.07
FBXO40Q9UH90 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
FBXO40Q9UH90 MIR410-201ENST00000362222 80 ntBASIC2.08□□□□□ -2.08
FBXO40Q9UH90 Y_RNA.47-201ENST00000362697 108 ntBASIC2.08□□□□□ -2.08
FBXO40Q9UH90 Y_RNA.149-201ENST00000363558 117 ntBASIC2.08□□□□□ -2.08
FBXO40Q9UH90 Y_RNA.276-201ENST00000364732 109 ntBASIC2.08□□□□□ -2.08
FBXO40Q9UH90 RNU6-407P-201ENST00000365280 104 ntBASIC2.08□□□□□ -2.08
FBXO40Q9UH90 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
FBXO40Q9UH90 MIR676-201ENST00000390702 67 ntBASIC2.08□□□□□ -2.08
FBXO40Q9UH90 SNORA40.19-201ENST00000390846 128 ntBASIC2.08□□□□□ -2.08
FBXO40Q9UH90 SNORD115-46-201ENST00000390982 71 ntBASIC2.08□□□□□ -2.08
FBXO40Q9UH90 RNU2-54P-201ENST00000410299 190 ntBASIC2.08□□□□□ -2.08
FBXO40Q9UH90 RNA5SP338-201ENST00000410495 85 ntBASIC2.08□□□□□ -2.08
FBXO40Q9UH90 AL731563.1-201ENST00000442202 214 ntBASIC2.08□□□□□ -2.08
FBXO40Q9UH90 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.08□□□□□ -2.08
FBXO40Q9UH90 AC005042.3-201ENST00000453230 174 ntBASIC2.08□□□□□ -2.08
FBXO40Q9UH90 SNORD65B-201ENST00000459126 73 ntBASIC2.08□□□□□ -2.08
FBXO40Q9UH90 RNU6-250P-201ENST00000516958 103 ntBASIC2.08□□□□□ -2.08
FBXO40Q9UH90 RNU2-12P-201ENST00000517216 168 ntBASIC2.08□□□□□ -2.08
FBXO40Q9UH90 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.08□□□□□ -2.08
FBXO40Q9UH90 AC023157.2-201ENST00000540596 141 ntBASIC2.08□□□□□ -2.08
FBXO40Q9UH90 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.08□□□□□ -2.08
FBXO40Q9UH90 MIR4255-201ENST00000579351 72 ntBASIC2.08□□□□□ -2.08
FBXO40Q9UH90 MIR4423-201ENST00000580922 80 ntBASIC2.08□□□□□ -2.08
FBXO40Q9UH90 AL162730.1-201ENST00000605734 292 ntBASIC2.08□□□□□ -2.08
FBXO40Q9UH90 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
FBXO40Q9UH90 RNU6-862P-201ENST00000362804 105 ntBASIC2.07□□□□□ -2.08
FBXO40Q9UH90 RNA5SP190-201ENST00000365222 118 ntBASIC2.07□□□□□ -2.08
FBXO40Q9UH90 SNORA20B-201ENST00000384220 132 ntBASIC2.07□□□□□ -2.08
FBXO40Q9UH90 SNORD63-201ENST00000384262 68 ntBASIC2.07□□□□□ -2.08
FBXO40Q9UH90 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
FBXO40Q9UH90 AL627390.1-201ENST00000396055 340 ntBASIC2.07□□□□□ -2.08
FBXO40Q9UH90 AL355796.1-201ENST00000406706 323 ntBASIC2.07□□□□□ -2.08
FBXO40Q9UH90 RNU2-40P-201ENST00000410833 196 ntBASIC2.07□□□□□ -2.08
FBXO40Q9UH90 RPL23AP36-201ENST00000413895 458 ntBASIC2.07□□□□□ -2.08
FBXO40Q9UH90 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.07□□□□□ -2.08
FBXO40Q9UH90 RNU1-131P-201ENST00000458943 161 ntBASIC2.07□□□□□ -2.08
FBXO40Q9UH90 RPS27P22-201ENST00000478056 241 ntBASIC2.07□□□□□ -2.08
FBXO40Q9UH90 RNU6-1143P-201ENST00000516125 104 ntBASIC2.07□□□□□ -2.08
FBXO40Q9UH90 MIR3145-201ENST00000580727 82 ntBASIC2.07□□□□□ -2.08
FBXO40Q9UH90 SNORD113-5-201ENST00000607261 78 ntBASIC2.07□□□□□ -2.08
FBXO40Q9UH90 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.07□□□□□ -2.08
FBXO40Q9UH90 AP000553.5-201ENST00000641933 54 ntBASIC2.07□□□□□ -2.08
FBXO40Q9UH90 ZNF702P-202ENST00000434269 1966 ntBASIC2.07□□□□□ -2.08
FBXO40Q9UH90 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.06□□□□□ -2.08
FBXO40Q9UH90 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.06□□□□□ -2.08
FBXO40Q9UH90 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.06□□□□□ -2.08
FBXO40Q9UH90 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
FBXO40Q9UH90 Y_RNA.124-201ENST00000363339 93 ntBASIC2.06□□□□□ -2.08
FBXO40Q9UH90 MIR1283-2-201ENST00000408621 87 ntBASIC2.06□□□□□ -2.08
FBXO40Q9UH90 RNU6-1199P-201ENST00000411249 104 ntBASIC2.06□□□□□ -2.08
FBXO40Q9UH90 AL390729.2-201ENST00000416137 156 ntBASIC2.06□□□□□ -2.08
FBXO40Q9UH90 MTND3P2-201ENST00000438452 342 ntBASIC2.06□□□□□ -2.08
FBXO40Q9UH90 AL353689.1-201ENST00000438895 199 ntBASIC2.06□□□□□ -2.08
FBXO40Q9UH90 AC010409.1-201ENST00000487382 476 ntBASIC2.06□□□□□ -2.08
FBXO40Q9UH90 RPS29P11-201ENST00000496507 171 ntBASIC2.06□□□□□ -2.08
FBXO40Q9UH90 SEPT14P8-201ENST00000508026 178 ntBASIC2.06□□□□□ -2.08
FBXO40Q9UH90 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.06□□□□□ -2.08
FBXO40Q9UH90 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.06□□□□□ -2.08
FBXO40Q9UH90 PRR13P7-201ENST00000605538 430 ntBASIC2.06□□□□□ -2.08
FBXO40Q9UH90 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.06□□□□□ -2.08
FBXO40Q9UH90 snoU2-30.2-201ENST00000362805 70 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 269.5 ms