Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
DDX43Q9NXZ2 RNU1-62P-201ENST00000362599 164 ntBASIC2.04□□□□□ -2.08
DDX43Q9NXZ2 Y_RNA.179-201ENST00000363844 90 ntBASIC2.04□□□□□ -2.08
DDX43Q9NXZ2 RNU6-290P-201ENST00000365212 101 ntBASIC2.04□□□□□ -2.08
DDX43Q9NXZ2 Y_RNA.446-201ENST00000384178 104 ntBASIC2.04□□□□□ -2.08
DDX43Q9NXZ2 RNU6-793P-201ENST00000384233 104 ntBASIC2.04□□□□□ -2.08
DDX43Q9NXZ2 SNORA67.2-201ENST00000384300 149 ntBASIC2.04□□□□□ -2.08
DDX43Q9NXZ2 MIR583-201ENST00000384846 75 ntBASIC2.04□□□□□ -2.08
DDX43Q9NXZ2 RNA5SP182-201ENST00000516064 82 ntBASIC2.04□□□□□ -2.08
DDX43Q9NXZ2 RNU6-295P-201ENST00000516901 104 ntBASIC2.04□□□□□ -2.08
DDX43Q9NXZ2 RNA5SP490-201ENST00000517141 136 ntBASIC2.04□□□□□ -2.08
DDX43Q9NXZ2 RNU6-111P-201ENST00000517179 105 ntBASIC2.04□□□□□ -2.08
DDX43Q9NXZ2 AP005660.1-201ENST00000522972 293 ntBASIC2.04□□□□□ -2.08
DDX43Q9NXZ2 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.04□□□□□ -2.08
DDX43Q9NXZ2 AL359851.1-201ENST00000569460 4997 ntBASIC2.04□□□□□ -2.08
DDX43Q9NXZ2 MIR4643-201ENST00000577473 78 ntBASIC2.04□□□□□ -2.08
DDX43Q9NXZ2 AL773524.1-201ENST00000614065 229 ntBASIC2.04□□□□□ -2.08
DDX43Q9NXZ2 AC141273.2-201ENST00000618989 130 ntBASIC2.04□□□□□ -2.08
DDX43Q9NXZ2 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.04□□□□□ -2.08
DDX43Q9NXZ2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
DDX43Q9NXZ2 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
DDX43Q9NXZ2 CENPCP1-201ENST00000533085 2578 ntBASIC2.04□□□□□ -2.08
DDX43Q9NXZ2 MIR410-201ENST00000362222 80 ntBASIC2.03□□□□□ -2.08
DDX43Q9NXZ2 U3.9-201ENST00000363823 204 ntBASIC2.03□□□□□ -2.08
DDX43Q9NXZ2 Y_RNA.230-201ENST00000364348 109 ntBASIC2.03□□□□□ -2.08
DDX43Q9NXZ2 RNU6-234P-201ENST00000365229 104 ntBASIC2.03□□□□□ -2.08
DDX43Q9NXZ2 Y_RNA.478-201ENST00000384358 107 ntBASIC2.03□□□□□ -2.08
DDX43Q9NXZ2 MIR597-201ENST00000384968 97 ntBASIC2.03□□□□□ -2.08
DDX43Q9NXZ2 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
DDX43Q9NXZ2 AL603910.2-201ENST00000407268 136 ntBASIC2.03□□□□□ -2.08
DDX43Q9NXZ2 RNU4-30P-201ENST00000410245 143 ntBASIC2.03□□□□□ -2.08
DDX43Q9NXZ2 Y_RNA.595-201ENST00000410403 105 ntBASIC2.03□□□□□ -2.08
DDX43Q9NXZ2 RNU6-1199P-201ENST00000411249 104 ntBASIC2.03□□□□□ -2.08
DDX43Q9NXZ2 RPL23AP6-201ENST00000446637 472 ntBASIC2.03□□□□□ -2.08
DDX43Q9NXZ2 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.03□□□□□ -2.08
DDX43Q9NXZ2 AC074133.1-201ENST00000515696 183 ntBASIC2.03□□□□□ -2.08
DDX43Q9NXZ2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.03□□□□□ -2.08
DDX43Q9NXZ2 AC018448.1-201ENST00000552843 316 ntBASIC2.03□□□□□ -2.08
DDX43Q9NXZ2 AL096840.1-201ENST00000603287 93 ntBASIC2.03□□□□□ -2.08
DDX43Q9NXZ2 SNORD113-5-201ENST00000607261 78 ntBASIC2.03□□□□□ -2.08
DDX43Q9NXZ2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
DDX43Q9NXZ2 RNU4-90P-201ENST00000362773 141 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 Y_RNA.101-201ENST00000363154 102 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 RNY1-201ENST00000364228 113 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 SNORA20.1-201ENST00000364790 130 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 RNU6-1175P-201ENST00000365200 107 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 Y_RNA.352-201ENST00000365439 102 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 SNORA8-201ENST00000384574 139 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 RNU6-160P-201ENST00000384591 107 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 SNORA40.18-201ENST00000391200 128 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 MIR548H3-201ENST00000408771 118 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 RNU5A-5P-201ENST00000411054 116 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 RAB28P5-201ENST00000427490 651 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 HMGN2P18-201ENST00000450680 270 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 HMGB3P17-201ENST00000504195 649 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 MRPS17P9-201ENST00000511924 393 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 SERF1AP1-201ENST00000514575 187 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 RNU6-344P-201ENST00000516635 111 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 CYCSP23-201ENST00000519781 313 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 AC026470.2-201ENST00000561492 181 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 SNRPGP20-201ENST00000604477 205 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 AC012493.3-201ENST00000604494 112 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 AC022441.3-201ENST00000605737 136 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 MIR6845-201ENST00000613182 61 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 AL442067.1-201ENST00000613261 223 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 AC005562.2-201ENST00000618264 111 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 U1.36-201ENST00000620684 176 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.02□□□□□ -2.09
DDX43Q9NXZ2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
DDX43Q9NXZ2 RNU6-727P-201ENST00000363592 107 ntBASIC2.01□□□□□ -2.09
DDX43Q9NXZ2 RNU5F-3P-201ENST00000363767 117 ntBASIC2.01□□□□□ -2.09
DDX43Q9NXZ2 SNORA18.2-201ENST00000383865 132 ntBASIC2.01□□□□□ -2.09
DDX43Q9NXZ2 Y_RNA.415-201ENST00000384012 112 ntBASIC2.01□□□□□ -2.09
DDX43Q9NXZ2 Y_RNA.418-201ENST00000384029 102 ntBASIC2.01□□□□□ -2.09
DDX43Q9NXZ2 Y_RNA.552-201ENST00000384665 112 ntBASIC2.01□□□□□ -2.09
DDX43Q9NXZ2 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
DDX43Q9NXZ2 RNA5SP489-201ENST00000410986 109 ntBASIC2.01□□□□□ -2.09
DDX43Q9NXZ2 RNU2-64P-201ENST00000411315 191 ntBASIC2.01□□□□□ -2.09
DDX43Q9NXZ2 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.01□□□□□ -2.09
DDX43Q9NXZ2 AC244636.1-201ENST00000421152 228 ntBASIC2.01□□□□□ -2.09
DDX43Q9NXZ2 HMGN2P19-201ENST00000425149 265 ntBASIC2.01□□□□□ -2.09
DDX43Q9NXZ2 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.01□□□□□ -2.09
DDX43Q9NXZ2 AL603825.1-201ENST00000438481 80 ntBASIC2.01□□□□□ -2.09
DDX43Q9NXZ2 AC003989.2-201ENST00000440224 169 ntBASIC2.01□□□□□ -2.09
DDX43Q9NXZ2 AC004386.2-201ENST00000441858 148 ntBASIC2.01□□□□□ -2.09
DDX43Q9NXZ2 SEPT14P8-201ENST00000508026 178 ntBASIC2.01□□□□□ -2.09
DDX43Q9NXZ2 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.01□□□□□ -2.09
DDX43Q9NXZ2 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.01□□□□□ -2.09
DDX43Q9NXZ2 TCL6_2.1-201ENST00000615162 119 ntBASIC2.01□□□□□ -2.09
DDX43Q9NXZ2 U2.14-201ENST00000615943 113 ntBASIC2.01□□□□□ -2.09
DDX43Q9NXZ2 AL590240.4-201ENST00000616908 390 ntBASIC2.01□□□□□ -2.09
DDX43Q9NXZ2 AL353997.5-201ENST00000618886 171 ntBASIC2.01□□□□□ -2.09
DDX43Q9NXZ2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms