Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC85AQ96PX6 SNORD33.1-201ENST00000516213 88 ntBASIC3.84□□□□□ -1.79
CCDC85AQ96PX6 SNORA18.4-201ENST00000516440 124 ntBASIC3.84□□□□□ -1.79
CCDC85AQ96PX6 RNA5SP490-201ENST00000517141 136 ntBASIC3.84□□□□□ -1.79
CCDC85AQ96PX6 RNA5SP170-201ENST00000517150 101 ntBASIC3.84□□□□□ -1.79
CCDC85AQ96PX6 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC85AQ96PX6 AC108081.1-201ENST00000604358 221 ntBASIC3.84□□□□□ -1.79
CCDC85AQ96PX6 AC090115.4-201ENST00000609970 188 ntBASIC3.84□□□□□ -1.79
CCDC85AQ96PX6 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
CCDC85AQ96PX6 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC85AQ96PX6 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
CCDC85AQ96PX6 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC85AQ96PX6 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC85AQ96PX6 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC85AQ96PX6 MIR22-201ENST00000362190 85 ntBASIC3.83□□□□□ -1.8
CCDC85AQ96PX6 RNU6-1298P-201ENST00000362456 101 ntBASIC3.83□□□□□ -1.8
CCDC85AQ96PX6 RNU1-72P-201ENST00000362976 153 ntBASIC3.83□□□□□ -1.8
CCDC85AQ96PX6 Y_RNA.91-201ENST00000363042 107 ntBASIC3.83□□□□□ -1.8
CCDC85AQ96PX6 Y_RNA.796-201ENST00000364268 102 ntBASIC3.83□□□□□ -1.8
CCDC85AQ96PX6 Y_RNA.799-201ENST00000364992 102 ntBASIC3.83□□□□□ -1.8
CCDC85AQ96PX6 SNORD58C-201ENST00000365223 64 ntBASIC3.83□□□□□ -1.8
CCDC85AQ96PX6 MIR562-201ENST00000384894 95 ntBASIC3.83□□□□□ -1.8
CCDC85AQ96PX6 MIR548A3-201ENST00000385297 97 ntBASIC3.83□□□□□ -1.8
CCDC85AQ96PX6 RNU11-5P-201ENST00000391216 129 ntBASIC3.83□□□□□ -1.8
CCDC85AQ96PX6 U6atac.2-201ENST00000408644 118 ntBASIC3.83□□□□□ -1.8
CCDC85AQ96PX6 RN7SKP220-201ENST00000410611 288 ntBASIC3.83□□□□□ -1.8
CCDC85AQ96PX6 AC021205.2-201ENST00000480069 347 ntBASIC3.83□□□□□ -1.8
CCDC85AQ96PX6 AC011604.1-201ENST00000545978 196 ntBASIC3.83□□□□□ -1.8
CCDC85AQ96PX6 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC85AQ96PX6 MIR7106-201ENST00000612419 65 ntBASIC3.83□□□□□ -1.8
CCDC85AQ96PX6 JPX_2.1-201ENST00000614161 69 ntBASIC3.83□□□□□ -1.8
CCDC85AQ96PX6 Pinc.1-201ENST00000616452 154 ntBASIC3.83□□□□□ -1.8
CCDC85AQ96PX6 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC85AQ96PX6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC85AQ96PX6 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CCDC85AQ96PX6 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC85AQ96PX6 RNU6-1209P-201ENST00000363655 107 ntBASIC3.82□□□□□ -1.8
CCDC85AQ96PX6 Y_RNA.346-201ENST00000365385 112 ntBASIC3.82□□□□□ -1.8
CCDC85AQ96PX6 SNORD116-21-201ENST00000384507 92 ntBASIC3.82□□□□□ -1.8
CCDC85AQ96PX6 Y_RNA.510-201ENST00000384511 114 ntBASIC3.82□□□□□ -1.8
CCDC85AQ96PX6 MIR624-201ENST00000385217 97 ntBASIC3.82□□□□□ -1.8
CCDC85AQ96PX6 Y_RNA.617-201ENST00000410920 90 ntBASIC3.82□□□□□ -1.8
CCDC85AQ96PX6 RNA5SP127-201ENST00000411051 133 ntBASIC3.82□□□□□ -1.8
CCDC85AQ96PX6 MTATP6P21-201ENST00000440681 189 ntBASIC3.82□□□□□ -1.8
CCDC85AQ96PX6 RPS12P18-201ENST00000442381 270 ntBASIC3.82□□□□□ -1.8
CCDC85AQ96PX6 UBE2DNL-203ENST00000474922 222 ntBASIC3.82□□□□□ -1.8
CCDC85AQ96PX6 RPL23AP94-201ENST00000512518 302 ntBASIC3.82□□□□□ -1.8
CCDC85AQ96PX6 SNORA4.4-201ENST00000515921 135 ntBASIC3.82□□□□□ -1.8
CCDC85AQ96PX6 RNU7-149P-201ENST00000516739 59 ntBASIC3.82□□□□□ -1.8
CCDC85AQ96PX6 SCARNA20.6-201ENST00000517251 106 ntBASIC3.82□□□□□ -1.8
CCDC85AQ96PX6 AC091178.2-201ENST00000584401 117 ntBASIC3.82□□□□□ -1.8
CCDC85AQ96PX6 AC110079.1-202ENST00000635213 138 ntBASIC3.82□□□□□ -1.8
CCDC85AQ96PX6 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC85AQ96PX6 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC85AQ96PX6 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC85AQ96PX6 SNORA5B-201ENST00000363786 132 ntBASIC3.81□□□□□ -1.8
CCDC85AQ96PX6 Y_RNA.309-201ENST00000365046 111 ntBASIC3.81□□□□□ -1.8
CCDC85AQ96PX6 RNU6-546P-201ENST00000383991 107 ntBASIC3.81□□□□□ -1.8
CCDC85AQ96PX6 MIR1289-1-201ENST00000408836 144 ntBASIC3.81□□□□□ -1.8
CCDC85AQ96PX6 EEF1A1P41-201ENST00000414667 207 ntBASIC3.81□□□□□ -1.8
CCDC85AQ96PX6 AC009969.1-201ENST00000438726 172 ntBASIC3.81□□□□□ -1.8
CCDC85AQ96PX6 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC85AQ96PX6 RPS26P45-201ENST00000471748 340 ntBASIC3.81□□□□□ -1.8
CCDC85AQ96PX6 RNU6-365P-201ENST00000517113 106 ntBASIC3.81□□□□□ -1.8
CCDC85AQ96PX6 AL365205.2-201ENST00000594586 68 ntBASIC3.81□□□□□ -1.8
CCDC85AQ96PX6 AL121890.5-201ENST00000620848 304 ntBASIC3.81□□□□□ -1.8
CCDC85AQ96PX6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC85AQ96PX6 AC080128.1-201ENST00000474389 1917 ntBASIC3.81□□□□□ -1.8
CCDC85AQ96PX6 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC85AQ96PX6 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC85AQ96PX6 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC85AQ96PX6 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC85AQ96PX6 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC85AQ96PX6 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC85AQ96PX6 MTND5P32-201ENST00000560711 1802 ntBASIC3.8□□□□□ -1.8
CCDC85AQ96PX6 MIR520G-201ENST00000385064 90 ntBASIC3.8□□□□□ -1.8
CCDC85AQ96PX6 MIR1253-201ENST00000408273 105 ntBASIC3.8□□□□□ -1.8
CCDC85AQ96PX6 AC107083.1-201ENST00000439643 279 ntBASIC3.8□□□□□ -1.8
CCDC85AQ96PX6 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC85AQ96PX6 AC092185.1-201ENST00000491371 97 ntBASIC3.8□□□□□ -1.8
CCDC85AQ96PX6 SCARNA3-201ENST00000517097 143 ntBASIC3.8□□□□□ -1.8
CCDC85AQ96PX6 NDUFA5P6-201ENST00000542110 379 ntBASIC3.8□□□□□ -1.8
CCDC85AQ96PX6 MIR3117-201ENST00000584034 78 ntBASIC3.8□□□□□ -1.8
CCDC85AQ96PX6 AC107294.3-201ENST00000609211 526 ntBASIC3.8□□□□□ -1.8
CCDC85AQ96PX6 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC85AQ96PX6 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC85AQ96PX6 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC85AQ96PX6 PWAR6-201ENST00000552334 4618 ntBASIC3.79□□□□□ -1.8
CCDC85AQ96PX6 Y_RNA.630-201ENST00000411370 108 ntBASIC3.79□□□□□ -1.8
CCDC85AQ96PX6 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC85AQ96PX6 HMGN1P18-201ENST00000457642 277 ntBASIC3.79□□□□□ -1.8
CCDC85AQ96PX6 RNU6-965P-201ENST00000516721 96 ntBASIC3.79□□□□□ -1.8
CCDC85AQ96PX6 SNORA31.26-201ENST00000517250 137 ntBASIC3.79□□□□□ -1.8
CCDC85AQ96PX6 RNU2-60P-201ENST00000517290 128 ntBASIC3.79□□□□□ -1.8
CCDC85AQ96PX6 MIR4425-201ENST00000580572 84 ntBASIC3.79□□□□□ -1.8
CCDC85AQ96PX6 MIR5739-201ENST00000619803 80 ntBASIC3.79□□□□□ -1.8
CCDC85AQ96PX6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC85AQ96PX6 MIR1248-201ENST00000629190 106 ntBASIC3.79□□□□□ -1.8
CCDC85AQ96PX6 MIR622-201ENST00000638396 96 ntBASIC3.79□□□□□ -1.8
CCDC85AQ96PX6 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms