Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 snoU13.6-201ENST00000458785 104 ntBASIC-1.33□□□□□ -2.62
GAFA1Q96PS6 RNU7-62P-201ENST00000458856 62 ntBASIC-1.33□□□□□ -2.62
GAFA1Q96PS6 RNU7-185P-201ENST00000459215 60 ntBASIC-1.33□□□□□ -2.62
GAFA1Q96PS6 MTND3P25-201ENST00000509243 135 ntBASIC-1.33□□□□□ -2.62
GAFA1Q96PS6 SNORA27.4-201ENST00000516650 95 ntBASIC-1.33□□□□□ -2.62
GAFA1Q96PS6 FGF7P1-201ENST00000582820 288 ntBASIC-1.33□□□□□ -2.62
GAFA1Q96PS6 AL355297.3-201ENST00000604082 446 ntBASIC-1.33□□□□□ -2.62
GAFA1Q96PS6 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.33□□□□□ -2.62
GAFA1Q96PS6 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-1.33□□□□□ -2.62
GAFA1Q96PS6 RNU6-25P-201ENST00000383873 107 ntBASIC-1.34□□□□□ -2.62
GAFA1Q96PS6 RNU6-15P-201ENST00000384534 107 ntBASIC-1.34□□□□□ -2.62
GAFA1Q96PS6 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.34□□□□□ -2.62
GAFA1Q96PS6 RNU6-29P-201ENST00000384637 107 ntBASIC-1.34□□□□□ -2.62
GAFA1Q96PS6 MIR1257-201ENST00000408490 117 ntBASIC-1.34□□□□□ -2.62
GAFA1Q96PS6 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.34□□□□□ -2.62
GAFA1Q96PS6 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.34□□□□□ -2.62
GAFA1Q96PS6 CALM2P2-201ENST00000428512 440 ntBASIC-1.34□□□□□ -2.62
GAFA1Q96PS6 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-1.34□□□□□ -2.62
GAFA1Q96PS6 MTCO1P27-201ENST00000448269 226 ntBASIC-1.34□□□□□ -2.62
GAFA1Q96PS6 MIR18B-201ENST00000454574 71 ntBASIC-1.34□□□□□ -2.62
GAFA1Q96PS6 AC097462.1-201ENST00000514125 324 ntBASIC-1.34□□□□□ -2.62
GAFA1Q96PS6 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.34□□□□□ -2.62
GAFA1Q96PS6 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.34□□□□□ -2.62
GAFA1Q96PS6 AC073539.2-201ENST00000597113 165 ntBASIC-1.34□□□□□ -2.62
GAFA1Q96PS6 AC012467.1-201ENST00000607740 256 ntBASIC-1.34□□□□□ -2.62
GAFA1Q96PS6 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.35□□□□□ -2.63
GAFA1Q96PS6 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.35□□□□□ -2.63
GAFA1Q96PS6 RNY3P13-201ENST00000365542 102 ntBASIC-1.35□□□□□ -2.63
GAFA1Q96PS6 RNY3P5-201ENST00000384127 102 ntBASIC-1.35□□□□□ -2.63
GAFA1Q96PS6 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.35□□□□□ -2.63
GAFA1Q96PS6 SNORD28B-201ENST00000390993 75 ntBASIC-1.35□□□□□ -2.63
GAFA1Q96PS6 MTND1P32-201ENST00000433043 938 ntBASIC-1.35□□□□□ -2.63
GAFA1Q96PS6 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-1.35□□□□□ -2.63
GAFA1Q96PS6 SCARNA18-201ENST00000459004 134 ntBASIC-1.35□□□□□ -2.63
GAFA1Q96PS6 RNU7-182P-201ENST00000459009 62 ntBASIC-1.35□□□□□ -2.63
GAFA1Q96PS6 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-1.35□□□□□ -2.63
GAFA1Q96PS6 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-1.35□□□□□ -2.63
GAFA1Q96PS6 ADI1P3-201ENST00000549509 470 ntBASIC-1.35□□□□□ -2.63
GAFA1Q96PS6 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.35□□□□□ -2.63
GAFA1Q96PS6 MIR4639-201ENST00000584938 69 ntBASIC-1.35□□□□□ -2.63
GAFA1Q96PS6 AP000907.4-201ENST00000604143 237 ntBASIC-1.35□□□□□ -2.63
GAFA1Q96PS6 AC012409.4-201ENST00000612923 249 ntBASIC-1.35□□□□□ -2.63
GAFA1Q96PS6 AC023158.2-201ENST00000614876 543 ntBASIC-1.35□□□□□ -2.63
GAFA1Q96PS6 AL162376.1-201ENST00000624117 175 ntBASIC-1.35□□□□□ -2.63
GAFA1Q96PS6 AC093726.3-201ENST00000637588 150 ntBASIC-1.35□□□□□ -2.63
GAFA1Q96PS6 RNU6-47P-201ENST00000383866 107 ntBASIC-1.36□□□□□ -2.63
GAFA1Q96PS6 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.36□□□□□ -2.63
GAFA1Q96PS6 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-1.36□□□□□ -2.63
GAFA1Q96PS6 AC117522.1-201ENST00000509821 380 ntBASIC-1.36□□□□□ -2.63
GAFA1Q96PS6 SCARNA17-201ENST00000516183 144 ntBASIC-1.36□□□□□ -2.63
GAFA1Q96PS6 RNU6-881P-201ENST00000516813 102 ntBASIC-1.36□□□□□ -2.63
GAFA1Q96PS6 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-1.36□□□□□ -2.63
GAFA1Q96PS6 MIR548AR-201ENST00000582191 57 ntBASIC-1.36□□□□□ -2.63
GAFA1Q96PS6 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-1.36□□□□□ -2.63
GAFA1Q96PS6 AC006441.5-201ENST00000612680 209 ntBASIC-1.36□□□□□ -2.63
GAFA1Q96PS6 AC010332.2-201ENST00000613083 1904 ntBASIC-1.36□□□□□ -2.63
GAFA1Q96PS6 RNU6-1266P-201ENST00000362794 105 ntBASIC-1.37□□□□□ -2.63
GAFA1Q96PS6 MTCO3P19-201ENST00000415864 321 ntBASIC-1.37□□□□□ -2.63
GAFA1Q96PS6 MCFD2P1-201ENST00000417812 300 ntBASIC-1.37□□□□□ -2.63
GAFA1Q96PS6 SPINT5P-201ENST00000448174 155 ntBASIC-1.37□□□□□ -2.63
GAFA1Q96PS6 snoU13.16-201ENST00000459350 104 ntBASIC-1.37□□□□□ -2.63
GAFA1Q96PS6 AC010486.3-201ENST00000511602 785 ntBASIC-1.37□□□□□ -2.63
GAFA1Q96PS6 AC021146.6-201ENST00000514659 117 ntBASIC-1.37□□□□□ -2.63
GAFA1Q96PS6 AL358944.1-201ENST00000528537 144 ntBASIC-1.37□□□□□ -2.63
GAFA1Q96PS6 MIR5692A1-201ENST00000580523 69 ntBASIC-1.37□□□□□ -2.63
GAFA1Q96PS6 AP001836.1-201ENST00000604675 523 ntBASIC-1.37□□□□□ -2.63
GAFA1Q96PS6 AC069545.1-201ENST00000605671 358 ntBASIC-1.37□□□□□ -2.63
GAFA1Q96PS6 AC099785.1-201ENST00000605697 437 ntBASIC-1.37□□□□□ -2.63
GAFA1Q96PS6 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.38□□□□□ -2.63
GAFA1Q96PS6 RNU4-36P-201ENST00000364294 144 ntBASIC-1.38□□□□□ -2.63
GAFA1Q96PS6 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.38□□□□□ -2.63
GAFA1Q96PS6 RNU2-62P-201ENST00000410868 191 ntBASIC-1.38□□□□□ -2.63
GAFA1Q96PS6 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.38□□□□□ -2.63
GAFA1Q96PS6 AL390729.2-201ENST00000416137 156 ntBASIC-1.38□□□□□ -2.63
GAFA1Q96PS6 TIMM9P2-201ENST00000419324 266 ntBASIC-1.38□□□□□ -2.63
GAFA1Q96PS6 AL031274.1-201ENST00000450334 232 ntBASIC-1.38□□□□□ -2.63
GAFA1Q96PS6 SNORA31.14-201ENST00000516728 116 ntBASIC-1.38□□□□□ -2.63
GAFA1Q96PS6 RNU7-172P-201ENST00000517125 64 ntBASIC-1.38□□□□□ -2.63
GAFA1Q96PS6 AC068587.4-201ENST00000533893 186 ntBASIC-1.38□□□□□ -2.63
GAFA1Q96PS6 AF250324.2-201ENST00000608299 610 ntBASIC-1.38□□□□□ -2.63
GAFA1Q96PS6 uc_338.4-201ENST00000616635 176 ntBASIC-1.38□□□□□ -2.63
GAFA1Q96PS6 AC022306.3-201ENST00000619930 550 ntBASIC-1.38□□□□□ -2.63
GAFA1Q96PS6 AC244669.1-204ENST00000621564 178 ntBASIC-1.38□□□□□ -2.63
GAFA1Q96PS6 AC006435.5-201ENST00000624486 112 ntBASIC-1.38□□□□□ -2.63
GAFA1Q96PS6 AC091948.2-201ENST00000636510 279 ntBASIC-1.38□□□□□ -2.63
GAFA1Q96PS6 U8.6-201ENST00000364939 135 ntBASIC-1.39□□□□□ -2.63
GAFA1Q96PS6 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.39□□□□□ -2.63
GAFA1Q96PS6 RNU5A-5P-201ENST00000411054 116 ntBASIC-1.39□□□□□ -2.63
GAFA1Q96PS6 AC091959.1-201ENST00000495857 238 ntBASIC-1.39□□□□□ -2.63
GAFA1Q96PS6 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.39□□□□□ -2.63
GAFA1Q96PS6 RNU6-344P-201ENST00000516635 111 ntBASIC-1.39□□□□□ -2.63
GAFA1Q96PS6 AL445435.1-201ENST00000604232 665 ntBASIC-1.39□□□□□ -2.63
GAFA1Q96PS6 AL445523.1-201ENST00000451184 1362 ntBASIC-1.39□□□□□ -2.63
GAFA1Q96PS6 MIR409-201ENST00000362237 79 ntBASIC-1.4□□□□□ -2.63
GAFA1Q96PS6 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.4□□□□□ -2.63
GAFA1Q96PS6 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.4□□□□□ -2.63
GAFA1Q96PS6 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.4□□□□□ -2.63
GAFA1Q96PS6 EXOSC3P1-201ENST00000448649 500 ntBASIC-1.4□□□□□ -2.63
GAFA1Q96PS6 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.4□□□□□ -2.63
GAFA1Q96PS6 SNORD65B-201ENST00000459126 73 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 262 ms