Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RNU6-612P-201ENST00000516909 102 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 AC022559.1-201ENST00000520905 205 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 AL590705.4-201ENST00000532209 134 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 CBX3P4-201ENST00000538909 354 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 AL442163.3-201ENST00000554110 156 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 MIR548AI-201ENST00000579940 88 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 MIR8076-201ENST00000611401 83 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 PCGEM1.1-201ENST00000613431 131 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 AC021753.1-201ENST00000635724 168 ntBASIC2.09□□□□□ -2.07
HOXC13P31276 LINC02555-201ENST00000563933 1951 ntBASIC2.09□□□□□ -2.08
HOXC13P31276 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
HOXC13P31276 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HOXC13P31276 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.08□□□□□ -2.08
HOXC13P31276 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
HOXC13P31276 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HOXC13P31276 MIR411-201ENST00000362239 96 ntBASIC2.08□□□□□ -2.08
HOXC13P31276 RNU6-227P-201ENST00000362865 103 ntBASIC2.08□□□□□ -2.08
HOXC13P31276 SNORD81.1-201ENST00000363064 77 ntBASIC2.08□□□□□ -2.08
HOXC13P31276 SNORD113-8-201ENST00000363497 74 ntBASIC2.08□□□□□ -2.08
HOXC13P31276 RNU6-682P-201ENST00000363843 106 ntBASIC2.08□□□□□ -2.08
HOXC13P31276 RNU6-102P-201ENST00000384485 104 ntBASIC2.08□□□□□ -2.08
HOXC13P31276 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.08□□□□□ -2.08
HOXC13P31276 RN7SKP51-201ENST00000410781 304 ntBASIC2.08□□□□□ -2.08
HOXC13P31276 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.08□□□□□ -2.08
HOXC13P31276 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.08□□□□□ -2.08
HOXC13P31276 RNU7-120P-201ENST00000459334 63 ntBASIC2.08□□□□□ -2.08
HOXC13P31276 RPL30P10-201ENST00000488148 337 ntBASIC2.08□□□□□ -2.08
HOXC13P31276 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.08□□□□□ -2.08
HOXC13P31276 RNU6-346P-201ENST00000516288 111 ntBASIC2.08□□□□□ -2.08
HOXC13P31276 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.08□□□□□ -2.08
HOXC13P31276 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.08□□□□□ -2.08
HOXC13P31276 CYP4A27P-201ENST00000567218 190 ntBASIC2.08□□□□□ -2.08
HOXC13P31276 MIR3198-2-201ENST00000577868 80 ntBASIC2.08□□□□□ -2.08
HOXC13P31276 MIR4781-201ENST00000585250 76 ntBASIC2.08□□□□□ -2.08
HOXC13P31276 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HOXC13P31276 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
HOXC13P31276 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
HOXC13P31276 RNU6-457P-201ENST00000363999 107 ntBASIC2.07□□□□□ -2.08
HOXC13P31276 RNA5SP160-201ENST00000364866 120 ntBASIC2.07□□□□□ -2.08
HOXC13P31276 RNU6-47P-201ENST00000383866 107 ntBASIC2.07□□□□□ -2.08
HOXC13P31276 SNORA12.2-201ENST00000391040 156 ntBASIC2.07□□□□□ -2.08
HOXC13P31276 MIR1283-2-201ENST00000408621 87 ntBASIC2.07□□□□□ -2.08
HOXC13P31276 RNA5SP201-201ENST00000410316 124 ntBASIC2.07□□□□□ -2.08
HOXC13P31276 BX510359.4-201ENST00000423750 193 ntBASIC2.07□□□□□ -2.08
HOXC13P31276 AC027124.2-201ENST00000428249 105 ntBASIC2.07□□□□□ -2.08
HOXC13P31276 HMGN2P18-201ENST00000450680 270 ntBASIC2.07□□□□□ -2.08
HOXC13P31276 AC079354.2-201ENST00000453523 154 ntBASIC2.07□□□□□ -2.08
HOXC13P31276 RNU6-717P-201ENST00000459076 104 ntBASIC2.07□□□□□ -2.08
HOXC13P31276 RNU6-1212P-201ENST00000517023 104 ntBASIC2.07□□□□□ -2.08
HOXC13P31276 RNA5SP490-201ENST00000517141 136 ntBASIC2.07□□□□□ -2.08
HOXC13P31276 AC091144.1-201ENST00000519573 138 ntBASIC2.07□□□□□ -2.08
HOXC13P31276 MIR4498-201ENST00000577599 66 ntBASIC2.07□□□□□ -2.08
HOXC13P31276 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.07□□□□□ -2.08
HOXC13P31276 Y_RNA.772-201ENST00000606692 102 ntBASIC2.07□□□□□ -2.08
HOXC13P31276 AC004832.4-201ENST00000608952 331 ntBASIC2.07□□□□□ -2.08
HOXC13P31276 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.07□□□□□ -2.08
HOXC13P31276 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.07□□□□□ -2.08
HOXC13P31276 AC240442.1-201ENST00000616055 283 ntBASIC2.07□□□□□ -2.08
HOXC13P31276 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.07□□□□□ -2.08
HOXC13P31276 Y_RNA.8-201ENST00000362353 102 ntBASIC2.06□□□□□ -2.08
HOXC13P31276 Y_RNA.122-201ENST00000363331 96 ntBASIC2.06□□□□□ -2.08
HOXC13P31276 Y_RNA.123-201ENST00000363338 102 ntBASIC2.06□□□□□ -2.08
HOXC13P31276 Y_RNA.170-201ENST00000363746 110 ntBASIC2.06□□□□□ -2.08
HOXC13P31276 RNU6-1164P-201ENST00000364428 107 ntBASIC2.06□□□□□ -2.08
HOXC13P31276 RNU6-234P-201ENST00000365229 104 ntBASIC2.06□□□□□ -2.08
HOXC13P31276 RNU6-926P-201ENST00000384075 107 ntBASIC2.06□□□□□ -2.08
HOXC13P31276 Y_RNA.581-201ENST00000391017 97 ntBASIC2.06□□□□□ -2.08
HOXC13P31276 AC019129.1-201ENST00000403786 261 ntBASIC2.06□□□□□ -2.08
HOXC13P31276 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.06□□□□□ -2.08
HOXC13P31276 EIF1AXP1-201ENST00000419267 435 ntBASIC2.06□□□□□ -2.08
HOXC13P31276 AC012306.1-201ENST00000423267 114 ntBASIC2.06□□□□□ -2.08
HOXC13P31276 AL445305.1-201ENST00000432577 575 ntBASIC2.06□□□□□ -2.08
HOXC13P31276 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.06□□□□□ -2.08
HOXC13P31276 TOMM22P6-201ENST00000465035 409 ntBASIC2.06□□□□□ -2.08
HOXC13P31276 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.06□□□□□ -2.08
HOXC13P31276 RNA5SP182-201ENST00000516064 82 ntBASIC2.06□□□□□ -2.08
HOXC13P31276 AP005660.1-201ENST00000522972 293 ntBASIC2.06□□□□□ -2.08
HOXC13P31276 MIR5089-201ENST00000580047 84 ntBASIC2.06□□□□□ -2.08
HOXC13P31276 MIR4659A-201ENST00000580269 81 ntBASIC2.06□□□□□ -2.08
HOXC13P31276 U2.14-201ENST00000615943 113 ntBASIC2.06□□□□□ -2.08
HOXC13P31276 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HOXC13P31276 RNU6-160P-201ENST00000384591 107 ntBASIC2.05□□□□□ -2.08
HOXC13P31276 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
HOXC13P31276 Y_RNA.626-201ENST00000411288 95 ntBASIC2.05□□□□□ -2.08
HOXC13P31276 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HOXC13P31276 EIF1P2-201ENST00000428233 350 ntBASIC2.05□□□□□ -2.08
HOXC13P31276 Z82188.1-201ENST00000436709 154 ntBASIC2.05□□□□□ -2.08
HOXC13P31276 RPS23P5-201ENST00000495419 428 ntBASIC2.05□□□□□ -2.08
HOXC13P31276 RNU7-175P-201ENST00000515915 61 ntBASIC2.05□□□□□ -2.08
HOXC13P31276 RNU6-1053P-201ENST00000515930 101 ntBASIC2.05□□□□□ -2.08
HOXC13P31276 SNORD116-28-201ENST00000516123 91 ntBASIC2.05□□□□□ -2.08
HOXC13P31276 RNU6-496P-201ENST00000516145 99 ntBASIC2.05□□□□□ -2.08
HOXC13P31276 Y_RNA.706-201ENST00000516933 99 ntBASIC2.05□□□□□ -2.08
HOXC13P31276 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.05□□□□□ -2.08
HOXC13P31276 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.05□□□□□ -2.08
HOXC13P31276 EIF4A1P12-201ENST00000551910 141 ntBASIC2.05□□□□□ -2.08
HOXC13P31276 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.05□□□□□ -2.08
HOXC13P31276 AC104465.1-201ENST00000611365 139 ntBASIC2.05□□□□□ -2.08
HOXC13P31276 MIR8081-201ENST00000611533 95 ntBASIC2.05□□□□□ -2.08
HOXC13P31276 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 196.9 ms