Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.12□□□□□ -2.07
MMP3P08254 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.12□□□□□ -2.07
MMP3P08254 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
MMP3P08254 Y_RNA.124-201ENST00000363339 93 ntBASIC2.11□□□□□ -2.07
MMP3P08254 RNU6-1164P-201ENST00000364428 107 ntBASIC2.11□□□□□ -2.07
MMP3P08254 RNU6-1310P-201ENST00000384153 107 ntBASIC2.11□□□□□ -2.07
MMP3P08254 RNU6-1235P-201ENST00000384559 107 ntBASIC2.11□□□□□ -2.07
MMP3P08254 MIR9-3-201ENST00000385084 90 ntBASIC2.11□□□□□ -2.07
MMP3P08254 RNU2-38P-201ENST00000410856 79 ntBASIC2.11□□□□□ -2.07
MMP3P08254 NDUFB4P10-201ENST00000452541 359 ntBASIC2.11□□□□□ -2.07
MMP3P08254 AC005042.3-201ENST00000453230 174 ntBASIC2.11□□□□□ -2.07
MMP3P08254 RNU6-498P-201ENST00000459468 107 ntBASIC2.11□□□□□ -2.07
MMP3P08254 RNU6-221P-201ENST00000459541 99 ntBASIC2.11□□□□□ -2.07
MMP3P08254 DEFB108E-201ENST00000524692 240 ntBASIC2.11□□□□□ -2.07
MMP3P08254 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.11□□□□□ -2.07
MMP3P08254 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.11□□□□□ -2.07
MMP3P08254 AC008749.1-201ENST00000597650 306 ntBASIC2.11□□□□□ -2.07
MMP3P08254 DEFB117-201ENST00000602356 141 ntBASIC2.11□□□□□ -2.07
MMP3P08254 SNORD113-5-201ENST00000607261 78 ntBASIC2.11□□□□□ -2.07
MMP3P08254 U6.115-201ENST00000636045 103 ntBASIC2.11□□□□□ -2.07
MMP3P08254 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.11□□□□□ -2.07
MMP3P08254 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
MMP3P08254 Y_RNA.99-201ENST00000363138 105 ntBASIC2.1□□□□□ -2.07
MMP3P08254 SNORA3A-201ENST00000364113 130 ntBASIC2.1□□□□□ -2.07
MMP3P08254 SNORD115-30-201ENST00000364117 82 ntBASIC2.1□□□□□ -2.07
MMP3P08254 Y_RNA.383-201ENST00000383855 97 ntBASIC2.1□□□□□ -2.07
MMP3P08254 U3.40-201ENST00000408706 208 ntBASIC2.1□□□□□ -2.07
MMP3P08254 AC060773.1-201ENST00000421698 310 ntBASIC2.1□□□□□ -2.07
MMP3P08254 BX510359.4-201ENST00000423750 193 ntBASIC2.1□□□□□ -2.07
MMP3P08254 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.1□□□□□ -2.07
MMP3P08254 RPL23AP7-203ENST00000449021 469 ntBASIC2.1□□□□□ -2.07
MMP3P08254 AC025033.1-201ENST00000463883 194 ntBASIC2.1□□□□□ -2.07
MMP3P08254 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
MMP3P08254 AC025647.1-201ENST00000517879 253 ntBASIC2.1□□□□□ -2.07
MMP3P08254 AP005660.1-201ENST00000522972 293 ntBASIC2.1□□□□□ -2.07
MMP3P08254 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.1□□□□□ -2.07
MMP3P08254 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.1□□□□□ -2.07
MMP3P08254 AC026271.5-201ENST00000577873 130 ntBASIC2.1□□□□□ -2.07
MMP3P08254 AP001282.2-201ENST00000616149 309 ntBASIC2.1□□□□□ -2.07
MMP3P08254 U4.1-201ENST00000620349 87 ntBASIC2.1□□□□□ -2.07
MMP3P08254 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.1□□□□□ -2.07
MMP3P08254 AC005336.3-201ENST00000623833 2679 ntBASIC2.1□□□□□ -2.07
MMP3P08254 AL159152.1-201ENST00000635019 2587 ntBASIC2.09□□□□□ -2.07
MMP3P08254 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
MMP3P08254 RNU4-90P-201ENST00000362773 141 ntBASIC2.09□□□□□ -2.07
MMP3P08254 Y_RNA.237-201ENST00000364439 102 ntBASIC2.09□□□□□ -2.07
MMP3P08254 Y_RNA.329-201ENST00000365209 107 ntBASIC2.09□□□□□ -2.07
MMP3P08254 RNU6-290P-201ENST00000365212 101 ntBASIC2.09□□□□□ -2.07
MMP3P08254 Y_RNA.452-201ENST00000384202 108 ntBASIC2.09□□□□□ -2.07
MMP3P08254 AL031003.1-201ENST00000404229 172 ntBASIC2.09□□□□□ -2.07
MMP3P08254 AL355796.1-201ENST00000406706 323 ntBASIC2.09□□□□□ -2.07
MMP3P08254 AL357134.1-201ENST00000445848 426 ntBASIC2.09□□□□□ -2.07
MMP3P08254 SEPT14P8-201ENST00000508026 178 ntBASIC2.09□□□□□ -2.07
MMP3P08254 RNU6-1041P-201ENST00000516254 102 ntBASIC2.09□□□□□ -2.07
MMP3P08254 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.09□□□□□ -2.07
MMP3P08254 RNU6-856P-201ENST00000516959 98 ntBASIC2.09□□□□□ -2.07
MMP3P08254 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.09□□□□□ -2.07
MMP3P08254 AC002984.1-201ENST00000591692 448 ntBASIC2.09□□□□□ -2.07
MMP3P08254 AC006380.1-201ENST00000603598 186 ntBASIC2.09□□□□□ -2.07
MMP3P08254 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.09□□□□□ -2.07
MMP3P08254 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
MMP3P08254 AC010615.1-201ENST00000594254 1764 ntBASIC2.08□□□□□ -2.08
MMP3P08254 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
MMP3P08254 RNA5SP493-201ENST00000364115 91 ntBASIC2.08□□□□□ -2.08
MMP3P08254 Y_RNA.226-201ENST00000364337 114 ntBASIC2.08□□□□□ -2.08
MMP3P08254 RNU6-702P-201ENST00000364982 107 ntBASIC2.08□□□□□ -2.08
MMP3P08254 Y_RNA.418-201ENST00000384029 102 ntBASIC2.08□□□□□ -2.08
MMP3P08254 RNU6-160P-201ENST00000384591 107 ntBASIC2.08□□□□□ -2.08
MMP3P08254 MIR597-201ENST00000384968 97 ntBASIC2.08□□□□□ -2.08
MMP3P08254 SNORA17.3-201ENST00000391159 129 ntBASIC2.08□□□□□ -2.08
MMP3P08254 SNORD23.1-201ENST00000408212 104 ntBASIC2.08□□□□□ -2.08
MMP3P08254 AC096920.1-201ENST00000423991 241 ntBASIC2.08□□□□□ -2.08
MMP3P08254 POLR2KP2-201ENST00000438155 177 ntBASIC2.08□□□□□ -2.08
MMP3P08254 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.08□□□□□ -2.08
MMP3P08254 SNORD65B-201ENST00000459126 73 ntBASIC2.08□□□□□ -2.08
MMP3P08254 RPS29P11-201ENST00000496507 171 ntBASIC2.08□□□□□ -2.08
MMP3P08254 Y_RNA.668-201ENST00000516233 93 ntBASIC2.08□□□□□ -2.08
MMP3P08254 MIR4781-201ENST00000585250 76 ntBASIC2.08□□□□□ -2.08
MMP3P08254 SDR42E1P4-201ENST00000620894 481 ntBASIC2.08□□□□□ -2.08
MMP3P08254 AC084768.2-201ENST00000622736 221 ntBASIC2.08□□□□□ -2.08
MMP3P08254 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
MMP3P08254 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.07□□□□□ -2.08
MMP3P08254 RNU4-80P-201ENST00000363200 141 ntBASIC2.07□□□□□ -2.08
MMP3P08254 RNU6-23P-201ENST00000363283 107 ntBASIC2.07□□□□□ -2.08
MMP3P08254 Y_RNA.288-201ENST00000364854 92 ntBASIC2.07□□□□□ -2.08
MMP3P08254 RNU6-407P-201ENST00000365280 104 ntBASIC2.07□□□□□ -2.08
MMP3P08254 SNORA20B-201ENST00000384220 132 ntBASIC2.07□□□□□ -2.08
MMP3P08254 HMGN2P34-201ENST00000437647 269 ntBASIC2.07□□□□□ -2.08
MMP3P08254 RPS27P21-201ENST00000486977 252 ntBASIC2.07□□□□□ -2.08
MMP3P08254 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.07□□□□□ -2.08
MMP3P08254 RNU6-436P-201ENST00000516171 114 ntBASIC2.07□□□□□ -2.08
MMP3P08254 RNU6-1338P-201ENST00000516328 91 ntBASIC2.07□□□□□ -2.08
MMP3P08254 RNU2-34P-201ENST00000516534 121 ntBASIC2.07□□□□□ -2.08
MMP3P08254 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.07□□□□□ -2.08
MMP3P08254 AC023157.2-201ENST00000540596 141 ntBASIC2.07□□□□□ -2.08
MMP3P08254 RPL21P9-201ENST00000556149 474 ntBASIC2.07□□□□□ -2.08
MMP3P08254 snoU13.31-201ENST00000607291 104 ntBASIC2.07□□□□□ -2.08
MMP3P08254 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.07□□□□□ -2.08
MMP3P08254 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.07□□□□□ -2.08
MMP3P08254 AC127459.3-201ENST00000624328 466 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 202.3 ms