Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
PCDHGA3Q9Y5H0 MIR6073-201ENST00000352083 89 ntBASIC2.53□□□□□ -2
PCDHGA3Q9Y5H0 RNU6-407P-201ENST00000365280 104 ntBASIC2.53□□□□□ -2
PCDHGA3Q9Y5H0 Y_RNA.489-201ENST00000384410 101 ntBASIC2.53□□□□□ -2
PCDHGA3Q9Y5H0 Y_RNA.562-201ENST00000384695 113 ntBASIC2.53□□□□□ -2
PCDHGA3Q9Y5H0 MIR518A2-201ENST00000384966 87 ntBASIC2.53□□□□□ -2
PCDHGA3Q9Y5H0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.53□□□□□ -2
PCDHGA3Q9Y5H0 CST2P1-201ENST00000425770 87 ntBASIC2.53□□□□□ -2
PCDHGA3Q9Y5H0 TRBV12-1-201ENST00000479785 344 ntBASIC2.53□□□□□ -2
PCDHGA3Q9Y5H0 RNU6-1041P-201ENST00000516254 102 ntBASIC2.53□□□□□ -2
PCDHGA3Q9Y5H0 AC024995.1-201ENST00000523014 93 ntBASIC2.53□□□□□ -2
PCDHGA3Q9Y5H0 MIR4529-201ENST00000578110 78 ntBASIC2.53□□□□□ -2
PCDHGA3Q9Y5H0 AC007229.1-201ENST00000590455 412 ntBASIC2.53□□□□□ -2
PCDHGA3Q9Y5H0 AC006006.1-201ENST00000603082 144 ntBASIC2.53□□□□□ -2
PCDHGA3Q9Y5H0 SNORD14A-201ENST00000606526 91 ntBASIC2.53□□□□□ -2
PCDHGA3Q9Y5H0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.53□□□□□ -2
PCDHGA3Q9Y5H0 CTSLP2-204ENST00000629029 392 ntBASIC2.53□□□□□ -2
PCDHGA3Q9Y5H0 Y_RNA.16-201ENST00000362421 102 ntBASIC2.52□□□□□ -2.01
PCDHGA3Q9Y5H0 Y_RNA.188-201ENST00000363952 111 ntBASIC2.52□□□□□ -2.01
PCDHGA3Q9Y5H0 SNORA70B-201ENST00000384210 135 ntBASIC2.52□□□□□ -2.01
PCDHGA3Q9Y5H0 RNU6-505P-201ENST00000384427 107 ntBASIC2.52□□□□□ -2.01
PCDHGA3Q9Y5H0 RNU11-3P-201ENST00000391111 133 ntBASIC2.52□□□□□ -2.01
PCDHGA3Q9Y5H0 MRPS10P1-201ENST00000448483 130 ntBASIC2.52□□□□□ -2.01
PCDHGA3Q9Y5H0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.52□□□□□ -2.01
PCDHGA3Q9Y5H0 RPS26P55-201ENST00000471178 356 ntBASIC2.52□□□□□ -2.01
PCDHGA3Q9Y5H0 RPS29P21-201ENST00000496272 170 ntBASIC2.52□□□□□ -2.01
PCDHGA3Q9Y5H0 RNU6-1278P-201ENST00000516130 107 ntBASIC2.52□□□□□ -2.01
PCDHGA3Q9Y5H0 RNU6-966P-201ENST00000516479 104 ntBASIC2.52□□□□□ -2.01
PCDHGA3Q9Y5H0 SNORA31.11-201ENST00000516528 139 ntBASIC2.52□□□□□ -2.01
PCDHGA3Q9Y5H0 SNORA27.4-201ENST00000516650 95 ntBASIC2.52□□□□□ -2.01
PCDHGA3Q9Y5H0 SCARNA24.2-201ENST00000516968 130 ntBASIC2.52□□□□□ -2.01
PCDHGA3Q9Y5H0 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.52□□□□□ -2.01
PCDHGA3Q9Y5H0 DEFB117-201ENST00000602356 141 ntBASIC2.52□□□□□ -2.01
PCDHGA3Q9Y5H0 U6.73-201ENST00000619194 103 ntBASIC2.52□□□□□ -2.01
PCDHGA3Q9Y5H0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.52□□□□□ -2.01
PCDHGA3Q9Y5H0 MIR338-201ENST00000636369 67 ntBASIC2.52□□□□□ -2.01
PCDHGA3Q9Y5H0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 RNU1-51P-201ENST00000365345 176 ntBASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 Y_RNA.418-201ENST00000384029 102 ntBASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 Y_RNA.456-201ENST00000384232 111 ntBASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 MIR1261-201ENST00000408659 82 ntBASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 RNA5SP181-201ENST00000410246 98 ntBASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 MTCO1P5-201ENST00000433573 344 ntBASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 RPS15AP28-201ENST00000435088 386 ntBASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 RNU1-41P-201ENST00000516161 162 ntBASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 RNU1-48P-201ENST00000516400 162 ntBASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 RNA5SP24-201ENST00000516478 95 ntBASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 RNA5SP82-201ENST00000516707 92 ntBASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 RNA5SP402-201ENST00000517148 110 ntBASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 RPL21P9-201ENST00000556149 474 ntBASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 AC009127.3-201ENST00000570531 403 ntBASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 MIR5194-201ENST00000582634 120 ntBASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 MIR4438-201ENST00000585271 93 ntBASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 AL137847.3-201ENST00000611521 109 ntBASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 AL359075.3-201ENST00000613288 217 ntBASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 AC245884.12-201ENST00000615364 59 ntBASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 MIR6715A-201ENST00000615929 79 ntBASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 U1.36-201ENST00000620684 176 ntBASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 MIR203B-201ENST00000636080 86 ntBASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 AC245060.5-201ENST00000610778 3293 ntBASIC2.51□□□□□ -2.01
PCDHGA3Q9Y5H0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
PCDHGA3Q9Y5H0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PCDHGA3Q9Y5H0 UBE2WP1-201ENST00000362030 340 ntBASIC2.5□□□□□ -2.01
PCDHGA3Q9Y5H0 Y_RNA.44-201ENST00000362676 108 ntBASIC2.5□□□□□ -2.01
PCDHGA3Q9Y5H0 Y_RNA.368-201ENST00000365547 113 ntBASIC2.5□□□□□ -2.01
PCDHGA3Q9Y5H0 RNU2-38P-201ENST00000410856 79 ntBASIC2.5□□□□□ -2.01
PCDHGA3Q9Y5H0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.5□□□□□ -2.01
PCDHGA3Q9Y5H0 RPL36AP21-201ENST00000490372 323 ntBASIC2.5□□□□□ -2.01
PCDHGA3Q9Y5H0 RNU6-191P-201ENST00000516295 94 ntBASIC2.5□□□□□ -2.01
PCDHGA3Q9Y5H0 RNU1-142P-201ENST00000516682 145 ntBASIC2.5□□□□□ -2.01
PCDHGA3Q9Y5H0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.5□□□□□ -2.01
PCDHGA3Q9Y5H0 SNORD53-201ENST00000579969 78 ntBASIC2.5□□□□□ -2.01
PCDHGA3Q9Y5H0 AC012433.1-201ENST00000588916 398 ntBASIC2.5□□□□□ -2.01
PCDHGA3Q9Y5H0 BX284668.6-201ENST00000606899 438 ntBASIC2.5□□□□□ -2.01
PCDHGA3Q9Y5H0 U2.14-201ENST00000615943 113 ntBASIC2.5□□□□□ -2.01
PCDHGA3Q9Y5H0 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.5□□□□□ -2.01
PCDHGA3Q9Y5H0 AC064859.1-201ENST00000624741 174 ntBASIC2.5□□□□□ -2.01
PCDHGA3Q9Y5H0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PCDHGA3Q9Y5H0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PCDHGA3Q9Y5H0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
PCDHGA3Q9Y5H0 RNU4-80P-201ENST00000363200 141 ntBASIC2.49□□□□□ -2.01
PCDHGA3Q9Y5H0 RNU1-96P-201ENST00000364163 162 ntBASIC2.49□□□□□ -2.01
PCDHGA3Q9Y5H0 Y_RNA.287-201ENST00000364853 94 ntBASIC2.49□□□□□ -2.01
PCDHGA3Q9Y5H0 Y_RNA.416-201ENST00000384014 113 ntBASIC2.49□□□□□ -2.01
PCDHGA3Q9Y5H0 RNU6-417P-201ENST00000384712 107 ntBASIC2.49□□□□□ -2.01
PCDHGA3Q9Y5H0 MIR144-201ENST00000384886 86 ntBASIC2.49□□□□□ -2.01
PCDHGA3Q9Y5H0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
PCDHGA3Q9Y5H0 BX510359.4-201ENST00000423750 193 ntBASIC2.49□□□□□ -2.01
PCDHGA3Q9Y5H0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
PCDHGA3Q9Y5H0 AC091959.1-201ENST00000495857 238 ntBASIC2.49□□□□□ -2.01
PCDHGA3Q9Y5H0 YWHAEP4-201ENST00000505390 198 ntBASIC2.49□□□□□ -2.01
PCDHGA3Q9Y5H0 AC008413.1-201ENST00000511864 177 ntBASIC2.49□□□□□ -2.01
PCDHGA3Q9Y5H0 RNU7-99P-201ENST00000516271 62 ntBASIC2.49□□□□□ -2.01
PCDHGA3Q9Y5H0 AC136628.3-201ENST00000521868 290 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms