Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 MIR5701-3-201ENST00000578890 82 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 MIR5701-1-201ENST00000585138 82 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 AC100812.1-201ENST00000607622 580 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 AC009229.3-201ENST00000608056 282 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 AC010999.1-201ENST00000611856 324 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.81□□□□□ -2.28
TNFRSF9Q07011 MIR5701-2-201ENST00000615634 82 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 MIR6734-201ENST00000621166 68 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 MIR6767-201ENST00000637302 66 ntBASIC0.81□□□□□ -2.28
TNFRSF9Q07011 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.8□□□□□ -2.28
TNFRSF9Q07011 Y_RNA.72-201ENST00000362894 103 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.8□□□□□ -2.28
TNFRSF9Q07011 RNU6-42P-201ENST00000384165 107 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 Y_RNA.490-201ENST00000384413 102 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 RNU6-601P-201ENST00000384540 107 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 Y_RNA.557-201ENST00000384680 107 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 MIR489-201ENST00000384923 84 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 MT-TL1-201ENST00000386347 75 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 MIR190B-201ENST00000401119 79 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 RNU4-14P-201ENST00000410858 122 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 EIF1P2-201ENST00000428233 350 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 USP9YP16-201ENST00000430287 407 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 AL353997.1-201ENST00000432936 108 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 MTND4P18-201ENST00000447010 465 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 RPS27P1-201ENST00000450552 247 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 AC107399.1-201ENST00000451226 265 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 NDUFB4P10-201ENST00000452541 359 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 USP9YP23-201ENST00000455085 407 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.8□□□□□ -2.28
TNFRSF9Q07011 U8.22-201ENST00000459141 133 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 snoU13.27-201ENST00000459278 104 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 RNU7-87P-201ENST00000459343 62 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 HMGN1P12-201ENST00000499125 195 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.8□□□□□ -2.28
TNFRSF9Q07011 AC046134.1-201ENST00000514454 666 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 Y_RNA.706-201ENST00000516933 99 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 Y_RNA.708-201ENST00000516950 96 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.8□□□□□ -2.28
TNFRSF9Q07011 AC093023.1-201ENST00000547375 507 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 AL121579.1-201ENST00000555129 305 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 MIR4661-201ENST00000582720 75 ntBASIC0.8□□□□□ -2.28
TNFRSF9Q07011 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.8□□□□□ -2.28
TNFRSF9Q07011 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.79□□□□□ -2.28
TNFRSF9Q07011 RNU6-845P-201ENST00000362578 103 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 RNY1P16-201ENST00000363063 111 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 Y_RNA.160-201ENST00000363677 92 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 RNU4-38P-201ENST00000364472 129 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 Y_RNA.279-201ENST00000364763 95 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 Y_RNA.482-201ENST00000384377 111 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 Y_RNA.505-201ENST00000384489 102 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 MIR194-1-201ENST00000384892 85 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 MIR329-1-201ENST00000385028 80 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 RNA5SP323-201ENST00000391094 133 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 RNU6-876P-201ENST00000391295 104 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 RNU1-139P-201ENST00000391307 165 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 RNU6-1186P-201ENST00000410429 97 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 RNU6-1001P-201ENST00000411265 100 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 AL161935.2-201ENST00000414627 60 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 PDCL2P1-201ENST00000419302 352 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 AC008134.1-201ENST00000420943 193 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.79□□□□□ -2.28
TNFRSF9Q07011 AC010154.1-201ENST00000425857 269 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 MTND1P2-201ENST00000430604 821 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 AC069257.2-201ENST00000441819 155 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.79□□□□□ -2.28
TNFRSF9Q07011 SNORD65B-201ENST00000459126 73 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.79□□□□□ -2.28
TNFRSF9Q07011 RNU6-1114P-201ENST00000516022 107 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 SNORD116-28-201ENST00000516123 91 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 RNU6-107P-201ENST00000516643 102 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 RNU1-142P-201ENST00000516682 145 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 RNA5SP481-201ENST00000516814 122 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 AC019176.1-201ENST00000518519 225 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 AC105029.1-201ENST00000520250 669 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 AC027419.1-201ENST00000522976 328 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 CYP3A52P-201ENST00000563326 91 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 AC090617.3-201ENST00000573670 475 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 U6atac.1-201ENST00000616025 117 ntBASIC0.79□□□□□ -2.28
TNFRSF9Q07011 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.79□□□□□ -2.28
TNFRSF9Q07011 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
TNFRSF9Q07011 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
TNFRSF9Q07011 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.79□□□□□ -2.28
TNFRSF9Q07011 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
TNFRSF9Q07011 RNU5F-3P-201ENST00000363767 117 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 RNU6-593P-201ENST00000364716 112 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 SNORA72.2-201ENST00000365028 127 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
TNFRSF9Q07011 RNU6-1145P-201ENST00000384246 107 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 MIR515-2-201ENST00000384883 83 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 MIR515-1-201ENST00000384884 83 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 MIR146A-201ENST00000385201 99 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 RNU6-700P-201ENST00000391043 107 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 SNORA75.4-201ENST00000391278 119 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 COX6CP10-201ENST00000416832 224 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 POLR2J4-204ENST00000418424 324 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 MTND4P17-201ENST00000470444 350 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.78□□□□□ -2.28
TNFRSF9Q07011 RNU6-120P-201ENST00000516077 103 ntBASIC0.78□□□□□ -2.28
TNFRSF9Q07011 SNORA31.10-201ENST00000516482 106 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms